RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 CBFA2T2O43439 604 aa16.83■□□□□ 0.28
TOP3B-201ENST00000357179 N4BP1O75113 896 aaKnown RBP16.83■□□□□ 0.28
TOP3B-201ENST00000357179 CEP89Q96ST8 783 aa16.83■□□□□ 0.28
TOP3B-201ENST00000357179 ANKZF1Q9H8Y5 726 aa16.83■□□□□ 0.28
TOP3B-201ENST00000357179 L1RE1Q9UN81 338 aa16.83■□□□□ 0.28
TOP3B-201ENST00000357179 KDM6AO15550 1401 aaPredicted RBP16.82■□□□□ 0.28
TOP3B-201ENST00000357179 TMEM94Q12767 1356 aa16.82■□□□□ 0.28
TOP3B-201ENST00000357179 UBASH3AP57075 661 aa16.82■□□□□ 0.28
TOP3B-201ENST00000357179 DPF2Q92785 391 aa16.82■□□□□ 0.28
TOP3B-201ENST00000357179 LRRC2Q9BYS8 371 aa16.82■□□□□ 0.28
TOP3B-201ENST00000357179 AFDNP55196 1824 aaKnown RBP16.82■□□□□ 0.28
TOP3B-201ENST00000357179 DDX46Q7L014 1031 aaKnown RBP16.82■□□□□ 0.28
TOP3B-201ENST00000357179 RTEL1Q9NZ71 1219 aa16.82■□□□□ 0.28
TOP3B-201ENST00000357179 POTEB2H3BUK9 544 aa16.81■□□□□ 0.28
TOP3B-201ENST00000357179 CT47A1Q5JQC4 288 aaPredicted RBP16.81■□□□□ 0.28
TOP3B-201ENST00000357179 ZMYM1Q5SVZ6 1142 aa16.81■□□□□ 0.28
TOP3B-201ENST00000357179 ILDR1Q86SU0 546 aaPredicted RBP16.81■□□□□ 0.28
TOP3B-201ENST00000357179 MSANTD4Q8NCY6 345 aa16.81■□□□□ 0.28
TOP3B-201ENST00000357179 SLC3A2P08195 630 aaKnown RBP16.81■□□□□ 0.28
TOP3B-201ENST00000357179 CASP7P55210 303 aa16.81■□□□□ 0.28
TOP3B-201ENST00000357179 CHMP4BP1P59074 171 aa16.81■□□□□ 0.28
TOP3B-201ENST00000357179 SLC39A6Q13433 755 aa16.81■□□□□ 0.28
TOP3B-201ENST00000357179 E2F4Q16254 413 aa16.81■□□□□ 0.28
TOP3B-201ENST00000357179 SRGAP1Q7Z6B7 1085 aa16.81■□□□□ 0.28
TOP3B-201ENST00000357179 FAM71BQ8TC56 605 aa16.81■□□□□ 0.28
TOP3B-201ENST00000357179 BIN1O00499 593 aa16.8■□□□□ 0.28
TOP3B-201ENST00000357179 PPFIA4O75335 1185 aa16.8■□□□□ 0.28
TOP3B-201ENST00000357179 SNRPA1P09661 255 aaKnown RBP16.8■□□□□ 0.28
TOP3B-201ENST00000357179 CCDC172P0C7W6 258 aa16.8■□□□□ 0.28
TOP3B-201ENST00000357179 PDIA3P30101 505 aaKnown RBP16.8■□□□□ 0.28
TOP3B-201ENST00000357179 GOLGA8FQ08AF8 430 aa16.8■□□□□ 0.28
TOP3B-201ENST00000357179 GOLGA8DPQ0D2H9 430 aa16.8■□□□□ 0.28
TOP3B-201ENST00000357179 UBE3BQ7Z3V4 1068 aa16.8■□□□□ 0.28
TOP3B-201ENST00000357179 TADA2BQ86TJ2 420 aa16.8■□□□□ 0.28
TOP3B-201ENST00000357179 NDUFB9Q9Y6M9 179 aa16.8■□□□□ 0.28
TOP3B-201ENST00000357179 E7EWF7 191 aa16.8■□□□□ 0.28
TOP3B-201ENST00000357179 ERLIN1O75477 346 aa16.8■□□□□ 0.28
TOP3B-201ENST00000357179 CHGBP05060 677 aa16.8■□□□□ 0.28
TOP3B-201ENST00000357179 TOP1P11387 765 aaKnown RBP16.8■□□□□ 0.28
TOP3B-201ENST00000357179 PAG1Q9NWQ8 432 aa16.8■□□□□ 0.28
TOP3B-201ENST00000357179 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.8■□□□□ 0.284e-7■■■□□ 15.1
TOP3B-201ENST00000357179 SPEF2Q9C093 1822 aa16.8■□□□□ 0.28
TOP3B-201ENST00000357179 CARMIL3Q8ND23 1372 aa16.8■□□□□ 0.28
TOP3B-201ENST00000357179 ARFGEF2Q9Y6D5 1785 aa16.8■□□□□ 0.28
TOP3B-201ENST00000357179 A0A087WUV0 522 aaPredicted RBP16.79■□□□□ 0.28
TOP3B-201ENST00000357179 ANKRD65E5RJM6 399 aa16.79■□□□□ 0.28
TOP3B-201ENST00000357179 CUTAO60888 179 aa16.79■□□□□ 0.28
TOP3B-201ENST00000357179 CNNM3Q8NE01 707 aa16.79■□□□□ 0.28
TOP3B-201ENST00000357179 AXIN2Q9Y2T1 843 aa16.79■□□□□ 0.28
TOP3B-201ENST00000357179 CEP83Q9Y592 693 aa16.79■□□□□ 0.28
TOP3B-201ENST00000357179 MST1RQ04912 1400 aa16.79■□□□□ 0.28
TOP3B-201ENST00000357179 APPP05067 770 aa16.79■□□□□ 0.28
TOP3B-201ENST00000357179 CFAP100Q494V2 611 aa16.79■□□□□ 0.28
TOP3B-201ENST00000357179 BAG1Q99933 345 aaPredicted RBP16.79■□□□□ 0.28
TOP3B-201ENST00000357179 CXorf56Q9H5V9 222 aa16.79■□□□□ 0.28
TOP3B-201ENST00000357179 TRPM3Q9HCF6 1732 aaPredicted RBP16.79■□□□□ 0.28
TOP3B-201ENST00000357179 STX10O60499 249 aa16.79■□□□□ 0.28
TOP3B-201ENST00000357179 SERPINC1P01008 464 aa16.79■□□□□ 0.28
TOP3B-201ENST00000357179 PRR29P0C7W0 189 aa16.79■□□□□ 0.28
TOP3B-201ENST00000357179 FOSBP53539 338 aa16.79■□□□□ 0.28
TOP3B-201ENST00000357179 ZNF496Q96IT1 587 aaPredicted RBP16.79■□□□□ 0.28
TOP3B-201ENST00000357179 PNKPQ96T60 521 aa16.79■□□□□ 0.28
TOP3B-201ENST00000357179 A0A087WZG4 1122 aa16.78■□□□□ 0.28
TOP3B-201ENST00000357179 YEATS4O95619 227 aa16.78■□□□□ 0.28
TOP3B-201ENST00000357179 HSPD1P10809 573 aaKnown RBP16.78■□□□□ 0.28
TOP3B-201ENST00000357179 PHKG2P15735 406 aa16.78■□□□□ 0.28
TOP3B-201ENST00000357179 CCT2P78371 535 aaKnown RBP16.78■□□□□ 0.28
TOP3B-201ENST00000357179 KCNG4Q8TDN1 519 aa16.78■□□□□ 0.28
TOP3B-201ENST00000357179 RAPGEF4Q8WZA2 1011 aa16.78■□□□□ 0.28
TOP3B-201ENST00000357179 ABCB6Q9NP58 842 aa16.78■□□□□ 0.28
TOP3B-201ENST00000357179 TOGARAM2Q6ZUX3 1019 aa16.78■□□□□ 0.28
TOP3B-201ENST00000357179 CCDC12Q8WUD4 166 aaPredicted RBP16.78■□□□□ 0.28
TOP3B-201ENST00000357179 TBX2Q13207 712 aaPredicted RBP16.77■□□□□ 0.28
TOP3B-201ENST00000357179 HSP90B2PQ58FF3 399 aa16.77■□□□□ 0.28
TOP3B-201ENST00000357179 DNAJC21Q5F1R6 531 aaKnown RBP16.77■□□□□ 0.28
TOP3B-201ENST00000357179 LINC00301Q8NCQ3 95 aa16.77■□□□□ 0.28
TOP3B-201ENST00000357179 PLBD2Q8NHP8 589 aa16.77■□□□□ 0.28
TOP3B-201ENST00000357179 SUGCTQ9HAC7 445 aa16.77■□□□□ 0.28
TOP3B-201ENST00000357179 TMEM232C9JQI7 657 aa16.77■□□□□ 0.27
TOP3B-201ENST00000357179 GOLIM4O00461 696 aa16.77■□□□□ 0.27
TOP3B-201ENST00000357179 EIF5P55010 431 aaKnown RBP16.77■□□□□ 0.27
TOP3B-201ENST00000357179 TUBB4BP68371 445 aa16.77■□□□□ 0.27
TOP3B-201ENST00000357179 CASP8Q14790 479 aa16.77■□□□□ 0.27
TOP3B-201ENST00000357179 CEP112Q8N8E3 955 aa16.77■□□□□ 0.27
TOP3B-201ENST00000357179 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.77■□□□□ 0.27
TOP3B-201ENST00000357179 ZSWIM4Q9H7M6 989 aa16.77■□□□□ 0.27
TOP3B-201ENST00000357179 MED4Q9NPJ6 270 aa16.77■□□□□ 0.27
TOP3B-201ENST00000357179 POLR3EQ9NVU0 708 aa16.77■□□□□ 0.27
TOP3B-201ENST00000357179 MYO1BO43795 1136 aa16.76■□□□□ 0.27
TOP3B-201ENST00000357179 MYCNP04198 464 aaPredicted RBP16.76■□□□□ 0.27
TOP3B-201ENST00000357179 FDPSP14324 419 aaKnown RBP16.76■□□□□ 0.27
TOP3B-201ENST00000357179 MYL5Q02045 173 aa16.76■□□□□ 0.27
TOP3B-201ENST00000357179 ANKLE2Q86XL3 938 aa16.76■□□□□ 0.27
TOP3B-201ENST00000357179 ZNF622Q969S3 477 aaKnown RBP eCLIP16.76■□□□□ 0.276e-7■□□□□ 11.1
TOP3B-201ENST00000357179 NCOA5Q9HCD5 579 aaKnown RBP16.76■□□□□ 0.27
TOP3B-201ENST00000357179 DONSONQ9NYP3 566 aa16.76■□□□□ 0.27
TOP3B-201ENST00000357179 RNF113AO15541 343 aaKnown RBP16.76■□□□□ 0.27
TOP3B-201ENST00000357179 ZNF202O95125 648 aa16.76■□□□□ 0.27
TOP3B-201ENST00000357179 LMBR1LQ6UX01 489 aa16.76■□□□□ 0.27
TOP3B-201ENST00000357179 ATG9AQ7Z3C6 839 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms