RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 EAF2Q96CJ1 260 aaPredicted RBP24.83■■□□□ 1.57
HCFC1R1-202ENST00000354679 CCDC8Q9H0W5 538 aaPredicted RBP24.83■■□□□ 1.57
HCFC1R1-202ENST00000354679 TLR7Q9NYK1 1049 aaKnown RBP24.83■■□□□ 1.57
HCFC1R1-202ENST00000354679 IREB2P48200 963 aaKnown RBP24.82■■□□□ 1.56
HCFC1R1-202ENST00000354679 SLF2Q8IX21 1173 aa24.82■■□□□ 1.56
HCFC1R1-202ENST00000354679 GAKO14976 1311 aa24.82■■□□□ 1.56
HCFC1R1-202ENST00000354679 CA12O43570 354 aa24.81■■□□□ 1.56
HCFC1R1-202ENST00000354679 USP2O75604 605 aaPredicted RBP24.81■■□□□ 1.56
HCFC1R1-202ENST00000354679 LBX1P52954 281 aa24.81■■□□□ 1.56
HCFC1R1-202ENST00000354679 TBC1D9Q6ZT07 1266 aa24.81■■□□□ 1.56
HCFC1R1-202ENST00000354679 PRDM10Q9NQV6 1147 aa24.81■■□□□ 1.56
HCFC1R1-202ENST00000354679 MYH2Q9UKX2 1941 aa24.8■■□□□ 1.56
HCFC1R1-202ENST00000354679 MECOMQ03112 1051 aa24.8■■□□□ 1.56
HCFC1R1-202ENST00000354679 RHPN1Q8TCX5 695 aa24.8■■□□□ 1.56
HCFC1R1-202ENST00000354679 ZNF512BQ96KM6 892 aaPredicted RBP24.8■■□□□ 1.56
HCFC1R1-202ENST00000354679 SNRKQ9NRH2 765 aa24.8■■□□□ 1.56
HCFC1R1-202ENST00000354679 USP40Q9NVE5 1235 aa24.8■■□□□ 1.56
HCFC1R1-202ENST00000354679 RPAP1Q9BWH6 1393 aaPredicted RBP24.8■■□□□ 1.56
HCFC1R1-202ENST00000354679 UNCXA6NJT0 531 aa24.79■■□□□ 1.56
HCFC1R1-202ENST00000354679 RRP1P56182 461 aaKnown RBP24.79■■□□□ 1.56
HCFC1R1-202ENST00000354679 AACSQ86V21 672 aa24.79■■□□□ 1.56
HCFC1R1-202ENST00000354679 REM2Q8IYK8 340 aaPredicted RBP24.79■■□□□ 1.56
HCFC1R1-202ENST00000354679 FAM163AQ96GL9 167 aaPredicted RBP24.79■■□□□ 1.56
HCFC1R1-202ENST00000354679 CSRNP1Q96S65 589 aa24.79■■□□□ 1.56
HCFC1R1-202ENST00000354679 IL1RAPL2Q9NP60 686 aa24.79■■□□□ 1.56
HCFC1R1-202ENST00000354679 RAI14Q9P0K7 980 aa24.79■■□□□ 1.56
HCFC1R1-202ENST00000354679 MROH7-TTC4A0A0A0MT08 1334 aa24.79■■□□□ 1.56
HCFC1R1-202ENST00000354679 APBB1O00213 710 aa24.78■■□□□ 1.56
HCFC1R1-202ENST00000354679 NFIAQ12857 509 aa24.78■■□□□ 1.56
HCFC1R1-202ENST00000354679 NSUN4Q96CB9 384 aaKnown RBP24.78■■□□□ 1.56
HCFC1R1-202ENST00000354679 KIF1BPQ96EK5 621 aa24.78■■□□□ 1.56
HCFC1R1-202ENST00000354679 SLC10A4Q96EP9 437 aa24.78■■□□□ 1.56
HCFC1R1-202ENST00000354679 CLMNQ96JQ2 1002 aa24.78■■□□□ 1.56
HCFC1R1-202ENST00000354679 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.78■■□□□ 1.56
HCFC1R1-202ENST00000354679 TSKSQ9UJT2 592 aa24.78■■□□□ 1.56
HCFC1R1-202ENST00000354679 BTDP43251 543 aa24.77■■□□□ 1.56
HCFC1R1-202ENST00000354679 GSTO1P78417 241 aa24.77■■□□□ 1.56
HCFC1R1-202ENST00000354679 MKRN3Q13064 507 aaKnown RBP24.77■■□□□ 1.56
HCFC1R1-202ENST00000354679 ANKRD13AQ8IZ07 590 aa24.77■■□□□ 1.56
HCFC1R1-202ENST00000354679 ZNF384Q8TF68 577 aa24.77■■□□□ 1.56
HCFC1R1-202ENST00000354679 FAM151AQ8WW52 585 aa24.77■■□□□ 1.56
HCFC1R1-202ENST00000354679 LRP2BPQ9P2M1 347 aa24.77■■□□□ 1.56
HCFC1R1-202ENST00000354679 AKAP11Q9UKA4 1901 aa24.76■■□□□ 1.55
HCFC1R1-202ENST00000354679 RAB11FIP3O75154 756 aa24.76■■□□□ 1.55
HCFC1R1-202ENST00000354679 TCP10Q12799 353 aa24.76■■□□□ 1.55
HCFC1R1-202ENST00000354679 SPRYD7Q5W111 196 aa24.76■■□□□ 1.55
HCFC1R1-202ENST00000354679 HOOK2Q96ED9 719 aa24.76■■□□□ 1.55
HCFC1R1-202ENST00000354679 LDHCP07864 332 aa24.75■■□□□ 1.55
HCFC1R1-202ENST00000354679 ZAP70P43403 619 aa24.75■■□□□ 1.55
HCFC1R1-202ENST00000354679 CLASRPQ8N2M8 674 aaKnown RBP24.75■■□□□ 1.55
HCFC1R1-202ENST00000354679 FAM198AQ9UFP1 575 aa24.75■■□□□ 1.55
HCFC1R1-202ENST00000354679 GPR75-ASB3A0A0A6YYF3 556 aa24.74■■□□□ 1.55
HCFC1R1-202ENST00000354679 CYP2E1P05181 493 aaPredicted RBP24.74■■□□□ 1.55
HCFC1R1-202ENST00000354679 WNK4Q96J92 1243 aa24.74■■□□□ 1.55
HCFC1R1-202ENST00000354679 IDI2Q9BXS1 227 aa24.74■■□□□ 1.55
HCFC1R1-202ENST00000354679 RNF186Q9NXI6 227 aa24.74■■□□□ 1.55
HCFC1R1-202ENST00000354679 SAGE1Q9NXZ1 904 aa24.74■■□□□ 1.55
HCFC1R1-202ENST00000354679 OTOFQ9HC10 1997 aa24.74■■□□□ 1.55
HCFC1R1-202ENST00000354679 RFX7Q2KHR2 1363 aa24.73■■□□□ 1.55
HCFC1R1-202ENST00000354679 RGS3P49796 1198 aa24.73■■□□□ 1.55
HCFC1R1-202ENST00000354679 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.73■■□□□ 1.553e-9■■■□□ 16.8
HCFC1R1-202ENST00000354679 TRPA1O75762 1119 aa24.72■■□□□ 1.55
HCFC1R1-202ENST00000354679 ZBTB48P10074 688 aaPredicted RBP24.72■■□□□ 1.55
HCFC1R1-202ENST00000354679 MAP3K9P80192 1104 aa24.72■■□□□ 1.55
HCFC1R1-202ENST00000354679 DCAF15Q66K64 600 aa24.72■■□□□ 1.55
HCFC1R1-202ENST00000354679 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.72■■□□□ 1.55
HCFC1R1-202ENST00000354679 TNS4Q8IZW8 715 aa24.72■■□□□ 1.55
HCFC1R1-202ENST00000354679 PIH1D3Q9NQM4 214 aaKnown RBP24.72■■□□□ 1.55
HCFC1R1-202ENST00000354679 ENTPD3O75355 529 aa24.71■■□□□ 1.55
HCFC1R1-202ENST00000354679 IFIT2P09913 472 aaKnown RBP24.71■■□□□ 1.55
HCFC1R1-202ENST00000354679 RHBDL3P58872 404 aa24.71■■□□□ 1.55
HCFC1R1-202ENST00000354679 SREBF2Q12772 1141 aa24.71■■□□□ 1.55
HCFC1R1-202ENST00000354679 ZFPM1Q8IX07 1006 aa24.71■■□□□ 1.55
HCFC1R1-202ENST00000354679 ELP3Q9H9T3 547 aa24.71■■□□□ 1.55
HCFC1R1-202ENST00000354679 MAST2Q6P0Q8 1798 aa24.71■■□□□ 1.55
HCFC1R1-202ENST00000354679 WDHD1O75717 1129 aaPredicted RBP24.7■■□□□ 1.54
HCFC1R1-202ENST00000354679 TM4SF4P48230 202 aa24.7■■□□□ 1.54
HCFC1R1-202ENST00000354679 VGLL4Q14135 290 aa24.7■■□□□ 1.54
HCFC1R1-202ENST00000354679 NAA16Q6N069 864 aaPredicted RBP24.7■■□□□ 1.54
HCFC1R1-202ENST00000354679 MIGA2Q7L4E1 593 aa24.7■■□□□ 1.54
HCFC1R1-202ENST00000354679 ZNF341Q9BYN7 854 aa24.7■■□□□ 1.54
HCFC1R1-202ENST00000354679 BCL11AQ9H165 835 aa24.7■■□□□ 1.54
HCFC1R1-202ENST00000354679 CSADQ9Y600 493 aa24.7■■□□□ 1.54
HCFC1R1-202ENST00000354679 IGSF3O75054 1194 aa24.69■■□□□ 1.54
HCFC1R1-202ENST00000354679 MAP4K4O95819 1239 aaPredicted RBP24.69■■□□□ 1.54
HCFC1R1-202ENST00000354679 WRNIP1Q96S55 665 aa24.69■■□□□ 1.54
HCFC1R1-202ENST00000354679 DDX4Q9NQI0 724 aaKnown RBP24.69■■□□□ 1.54
HCFC1R1-202ENST00000354679 NDUFB9Q9Y6M9 179 aa24.69■■□□□ 1.54
HCFC1R1-202ENST00000354679 MANSC4A6NHS7 340 aaPredicted RBP24.68■■□□□ 1.54
HCFC1R1-202ENST00000354679 GJA5P36382 358 aa24.68■■□□□ 1.54
HCFC1R1-202ENST00000354679 PICALMQ13492 652 aa24.68■■□□□ 1.54
HCFC1R1-202ENST00000354679 NOL10Q9BSC4 688 aaKnown RBP24.68■■□□□ 1.54
HCFC1R1-202ENST00000354679 AK9Q5TCS8 1911 aa24.68■■□□□ 1.54
HCFC1R1-202ENST00000354679 OPTNQ96CV9 577 aa24.67■■□□□ 1.54
HCFC1R1-202ENST00000354679 LRRCC1Q9C099 1032 aa24.67■■□□□ 1.54
HCFC1R1-202ENST00000354679 MYO5AQ9Y4I1 1855 aaKnown RBP24.66■■□□□ 1.54
HCFC1R1-202ENST00000354679 IDH1O75874 414 aaKnown RBP24.66■■□□□ 1.54
HCFC1R1-202ENST00000354679 ZSCAN29Q8IWY8 852 aaPredicted RBP24.66■■□□□ 1.54
HCFC1R1-202ENST00000354679 SNCAIPQ9Y6H5 919 aa24.66■■□□□ 1.54
HCFC1R1-202ENST00000354679 NPM3O75607 178 aaKnown RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms