RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 NOLC1Q14978 699 aaKnown RBP eCLIP25.93■■□□□ 1.74
NPAS3-201ENST00000346562 GPCPD1Q9NPB8 672 aa25.93■■□□□ 1.74
NPAS3-201ENST00000346562 WWC3Q9ULE0 1092 aa25.93■■□□□ 1.74
NPAS3-201ENST00000346562 ELP1O95163 1332 aa25.93■■□□□ 1.74
NPAS3-201ENST00000346562 CCDC121Q6ZUS5 278 aa25.93■■□□□ 1.74
NPAS3-201ENST00000346562 NAP1L3Q99457 506 aaPredicted RBP25.92■■□□□ 1.74
NPAS3-201ENST00000346562 LIN9Q5TKA1 542 aa25.92■■□□□ 1.74
NPAS3-201ENST00000346562 BICC1Q9H694 974 aaKnown RBP25.92■■□□□ 1.74
NPAS3-201ENST00000346562 FAM204AQ9H8W3 233 aa25.92■■□□□ 1.74
NPAS3-201ENST00000346562 HARSP12081 509 aaKnown RBP25.92■■□□□ 1.74
NPAS3-201ENST00000346562 TRPC3Q13507 836 aa25.92■■□□□ 1.74
NPAS3-201ENST00000346562 MCM6Q14566 821 aa25.92■■□□□ 1.74
NPAS3-201ENST00000346562 GPR161Q8N6U8 529 aaKnown RBP25.92■■□□□ 1.74
NPAS3-201ENST00000346562 TRERF1Q96PN7 1200 aa25.92■■□□□ 1.74
NPAS3-201ENST00000346562 JAG2Q9Y219 1238 aa25.92■■□□□ 1.74
NPAS3-201ENST00000346562 E7EVH7 732 aa25.91■■□□□ 1.74
NPAS3-201ENST00000346562 NOL3O60936 208 aaKnown RBP25.91■■□□□ 1.74
NPAS3-201ENST00000346562 HIBADHP31937 336 aaKnown RBP25.91■■□□□ 1.74
NPAS3-201ENST00000346562 CCDC25Q86WR0 208 aa25.91■■□□□ 1.74
NPAS3-201ENST00000346562 GGA1Q9UJY5 639 aa25.91■■□□□ 1.74
NPAS3-201ENST00000346562 CCDC169A6NNP5 214 aa25.91■■□□□ 1.74
NPAS3-201ENST00000346562 ATP5DP30049 168 aa25.91■■□□□ 1.74
NPAS3-201ENST00000346562 VAV2P52735 878 aa25.91■■□□□ 1.74
NPAS3-201ENST00000346562 CEP85Q6P2H3 762 aa25.91■■□□□ 1.74
NPAS3-201ENST00000346562 CNNM4Q6P4Q7 775 aa25.91■■□□□ 1.74
NPAS3-201ENST00000346562 IVNS1ABPQ9Y6Y0 642 aa25.91■■□□□ 1.74
NPAS3-201ENST00000346562 GABPB2Q8TAK5 448 aaPredicted RBP25.91■■□□□ 1.74
NPAS3-201ENST00000346562 ZNF569Q5MCW4 686 aa25.91■■□□□ 1.74
NPAS3-201ENST00000346562 RASA3Q14644 834 aa25.9■■□□□ 1.74
NPAS3-201ENST00000346562 PUM3Q15397 648 aaKnown RBP25.9■■□□□ 1.74
NPAS3-201ENST00000346562 KCNK9Q9NPC2 374 aa25.9■■□□□ 1.74
NPAS3-201ENST00000346562 VWA3AA6NCI4 1184 aa25.9■■□□□ 1.74
NPAS3-201ENST00000346562 CCDC26Q8TAB7 109 aa25.9■■□□□ 1.74
NPAS3-201ENST00000346562 LEO1Q8WVC0 666 aaPredicted RBP25.9■■□□□ 1.74
NPAS3-201ENST00000346562 IFT81Q8WYA0 676 aa25.9■■□□□ 1.74
NPAS3-201ENST00000346562 MKRN1Q9UHC7 482 aaKnown RBP25.9■■□□□ 1.74
NPAS3-201ENST00000346562 STK10O94804 968 aaKnown RBP25.9■■□□□ 1.74
NPAS3-201ENST00000346562 SETDB1Q15047 1291 aa25.9■■□□□ 1.74
NPAS3-201ENST00000346562 NPATQ14207 1427 aa25.9■■□□□ 1.74
NPAS3-201ENST00000346562 SMIM23A6NLE4 172 aa25.9■■□□□ 1.74
NPAS3-201ENST00000346562 CTNND2Q9UQB3 1225 aa25.9■■□□□ 1.74
NPAS3-201ENST00000346562 A2MP01023 1474 aa25.9■■□□□ 1.74
NPAS3-201ENST00000346562 TRAF5O00463 557 aa25.9■■□□□ 1.74
NPAS3-201ENST00000346562 NOP56O00567 594 aaKnown RBP25.9■■□□□ 1.74
NPAS3-201ENST00000346562 CHMP2AO43633 222 aa25.9■■□□□ 1.74
NPAS3-201ENST00000346562 DEXIO95424 95 aa25.9■■□□□ 1.74
NPAS3-201ENST00000346562 TNFAIP3P21580 790 aa25.9■■□□□ 1.74
NPAS3-201ENST00000346562 ERCC5P28715 1186 aaPredicted RBP25.9■■□□□ 1.74
NPAS3-201ENST00000346562 EIF6P56537 245 aaKnown RBP25.9■■□□□ 1.74
NPAS3-201ENST00000346562 ZNF830Q96NB3 372 aaPredicted RBP25.9■■□□□ 1.74
NPAS3-201ENST00000346562 CCNL1Q9UK58 526 aaPredicted RBP25.9■■□□□ 1.74
NPAS3-201ENST00000346562 ZNF174Q15697 407 aa25.89■■□□□ 1.74
NPAS3-201ENST00000346562 ARFGAP2Q8N6H7 521 aa25.89■■□□□ 1.74
NPAS3-201ENST00000346562 SUPT20HQ8NEM7 779 aa25.89■■□□□ 1.74
NPAS3-201ENST00000346562 PPP1R9BQ96SB3 815 aa25.89■■□□□ 1.74
NPAS3-201ENST00000346562 YTHDC2Q9H6S0 1430 aaKnown RBP25.89■■□□□ 1.74
NPAS3-201ENST00000346562 NOC4LQ9BVI4 516 aaKnown RBP25.89■■□□□ 1.74
NPAS3-201ENST00000346562 RXRAP19793 462 aa25.89■■□□□ 1.74
NPAS3-201ENST00000346562 MAPK8IP2Q13387 824 aaPredicted RBP25.89■■□□□ 1.74
NPAS3-201ENST00000346562 CCDC110Q8TBZ0 833 aa25.89■■□□□ 1.74
NPAS3-201ENST00000346562 HAUS7Q99871 368 aa25.89■■□□□ 1.74
NPAS3-201ENST00000346562 TRIM14Q14142 442 aa25.89■■□□□ 1.73
NPAS3-201ENST00000346562 TMEM87BQ96K49 555 aa25.89■■□□□ 1.73
NPAS3-201ENST00000346562 NOX5Q96PH1 765 aa25.89■■□□□ 1.73
NPAS3-201ENST00000346562 ZKSCAN3Q9BRR0 538 aa25.89■■□□□ 1.73
NPAS3-201ENST00000346562 EIF2AK4Q9P2K8 1649 aaKnown RBP25.88■■□□□ 1.73
NPAS3-201ENST00000346562 MNAT1P51948 309 aa25.88■■□□□ 1.73
NPAS3-201ENST00000346562 SAMD15Q9P1V8 674 aa25.88■■□□□ 1.73
NPAS3-201ENST00000346562 ZMYND15Q9H091 742 aa25.88■■□□□ 1.73
NPAS3-201ENST00000346562 SEC62Q99442 399 aaKnown RBP25.88■■□□□ 1.73
NPAS3-201ENST00000346562 LZTFL1Q9NQ48 299 aa25.88■■□□□ 1.73
NPAS3-201ENST00000346562 RSPH14Q9UHP6 348 aa25.88■■□□□ 1.73
NPAS3-201ENST00000346562 KARSQ15046 597 aaKnown RBP25.88■■□□□ 1.73
NPAS3-201ENST00000346562 RILPL1Q5EBL4 403 aa25.87■■□□□ 1.73
NPAS3-201ENST00000346562 LMTK3Q96Q04 1460 aa25.87■■□□□ 1.73
NPAS3-201ENST00000346562 CCNT1O60563 726 aaKnown RBP25.87■■□□□ 1.73
NPAS3-201ENST00000346562 ZBED4O75132 1171 aa25.87■■□□□ 1.73
NPAS3-201ENST00000346562 KRT9P35527 623 aa25.87■■□□□ 1.73
NPAS3-201ENST00000346562 CCDC160A6NGH7 325 aa25.87■■□□□ 1.73
NPAS3-201ENST00000346562 DAPK3O43293 454 aa25.87■■□□□ 1.73
NPAS3-201ENST00000346562 SPOPO43791 374 aa25.87■■□□□ 1.73
NPAS3-201ENST00000346562 TRIM6Q9C030 488 aaPredicted RBP25.87■■□□□ 1.73
NPAS3-201ENST00000346562 ITGA6P23229 1130 aa25.86■■□□□ 1.73
NPAS3-201ENST00000346562 PLBD2Q8NHP8 589 aa25.86■■□□□ 1.73
NPAS3-201ENST00000346562 DCTPP1Q9H773 170 aa25.86■■□□□ 1.73
NPAS3-201ENST00000346562 IFNKQ9P0W0 207 aa25.86■■□□□ 1.73
NPAS3-201ENST00000346562 TUBBP07437 444 aa25.86■■□□□ 1.73
NPAS3-201ENST00000346562 PDE4DQ08499 809 aa25.86■■□□□ 1.73
NPAS3-201ENST00000346562 HAUS2Q9NVX0 235 aa25.86■■□□□ 1.73
NPAS3-201ENST00000346562 FCHSD1Q86WN1 690 aa25.86■■□□□ 1.73
NPAS3-201ENST00000346562 PROCA1Q8NCQ7 364 aaPredicted RBP25.86■■□□□ 1.73
NPAS3-201ENST00000346562 ZNF518AQ6AHZ1 1483 aa25.85■■□□□ 1.73
NPAS3-201ENST00000346562 AKR1B15C9JRZ8 316 aaPredicted RBP25.85■■□□□ 1.73
NPAS3-201ENST00000346562 CPLX4Q7Z7G2 160 aa25.85■■□□□ 1.73
NPAS3-201ENST00000346562 HOXC9P31274 260 aa25.85■■□□□ 1.73
NPAS3-201ENST00000346562 POLKQ9UBT6 870 aa25.85■■□□□ 1.73
NPAS3-201ENST00000346562 POLR3AO14802 1390 aaPredicted RBP25.85■■□□□ 1.73
NPAS3-201ENST00000346562 ARHGEF35A5YM69 484 aa25.85■■□□□ 1.73
NPAS3-201ENST00000346562 CLUL1Q15846 466 aa25.85■■□□□ 1.73
NPAS3-201ENST00000346562 ZNF710Q8N1W2 664 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms