RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 PALLDQ8WX93 1383 aa15.4■□□□□ 0.06
CASC4-202ENST00000345795 RPAP1Q9BWH6 1393 aaPredicted RBP15.4■□□□□ 0.06
CASC4-202ENST00000345795 RPS8P62241 208 aaKnown RBP15.4■□□□□ 0.06
CASC4-202ENST00000345795 GOLGA8FQ08AF8 430 aa15.4■□□□□ 0.06
CASC4-202ENST00000345795 GOLGA8DPQ0D2H9 430 aa15.4■□□□□ 0.06
CASC4-202ENST00000345795 KRT40Q6A162 431 aa15.4■□□□□ 0.06
CASC4-202ENST00000345795 TMC6Q7Z403 805 aa15.4■□□□□ 0.06
CASC4-202ENST00000345795 GRAMD1CQ8IYS0 662 aa15.4■□□□□ 0.06
CASC4-202ENST00000345795 CTCFLQ8NI51 663 aaPredicted RBP15.4■□□□□ 0.06
CASC4-202ENST00000345795 DHX58Q96C10 678 aa15.4■□□□□ 0.06
CASC4-202ENST00000345795 TRIM34Q9BYJ4 488 aa15.4■□□□□ 0.06
CASC4-202ENST00000345795 LETM1O95202 739 aaPredicted RBP15.39■□□□□ 0.05
CASC4-202ENST00000345795 SYKP43405 635 aa15.39■□□□□ 0.05
CASC4-202ENST00000345795 RABL6Q3YEC7 729 aaPredicted RBP15.39■□□□□ 0.05
CASC4-202ENST00000345795 CDKL5O76039 1030 aa15.39■□□□□ 0.05
CASC4-202ENST00000345795 UFL1O94874 794 aa15.39■□□□□ 0.05
CASC4-202ENST00000345795 OLFM4Q6UX06 510 aa15.39■□□□□ 0.05
CASC4-202ENST00000345795 TRMT44Q8IYL2 757 aaKnown RBP15.39■□□□□ 0.05
CASC4-202ENST00000345795 CNBD1Q8NA66 436 aa15.39■□□□□ 0.05
CASC4-202ENST00000345795 CLCN1P35523 988 aa15.39■□□□□ 0.05
CASC4-202ENST00000345795 TCP10Q12799 353 aa15.39■□□□□ 0.05
CASC4-202ENST00000345795 ARID5BQ14865 1188 aa15.39■□□□□ 0.05
CASC4-202ENST00000345795 TRAPPC3LQ5T215 181 aa15.39■□□□□ 0.05
CASC4-202ENST00000345795 FAM200AQ8TCP9 573 aa15.39■□□□□ 0.05
CASC4-202ENST00000345795 MRPS27Q92552 414 aaKnown RBP15.39■□□□□ 0.05
CASC4-202ENST00000345795 IL6STP40189 918 aaPredicted RBP15.38■□□□□ 0.05
CASC4-202ENST00000345795 SCNN1DP51172 638 aa15.38■□□□□ 0.05
CASC4-202ENST00000345795 DOK7Q18PE1 504 aa15.38■□□□□ 0.05
CASC4-202ENST00000345795 CATIPQ7Z7H3 387 aa15.38■□□□□ 0.05
CASC4-202ENST00000345795 DIS3L2Q8IYB7 885 aaKnown RBP15.38■□□□□ 0.05
CASC4-202ENST00000345795 ZNF444Q8N0Y2 327 aaPredicted RBP15.38■□□□□ 0.05
CASC4-202ENST00000345795 TGFBRAP1Q8WUH2 860 aa15.38■□□□□ 0.05
CASC4-202ENST00000345795 PGBD1Q96JS3 809 aa15.38■□□□□ 0.05
CASC4-202ENST00000345795 PRDM10Q9NQV6 1147 aa15.38■□□□□ 0.05
CASC4-202ENST00000345795 XBP1P17861 261 aa15.38■□□□□ 0.05
CASC4-202ENST00000345795 HIBADHP31937 336 aaKnown RBP15.38■□□□□ 0.05
CASC4-202ENST00000345795 MCM7P33993 719 aa15.38■□□□□ 0.05
CASC4-202ENST00000345795 RASGRP4Q8TDF6 673 aa15.38■□□□□ 0.05
CASC4-202ENST00000345795 DYNLL2Q96FJ2 89 aa15.38■□□□□ 0.05
CASC4-202ENST00000345795 NEDD4P46934 1319 aa15.38■□□□□ 0.05
CASC4-202ENST00000345795 CASP1P29466 404 aa15.38■□□□□ 0.05
CASC4-202ENST00000345795 NDUFA8P51970 172 aa15.38■□□□□ 0.05
CASC4-202ENST00000345795 HEATR3Q7Z4Q2 680 aa15.38■□□□□ 0.05
CASC4-202ENST00000345795 DSCC1Q9BVC3 393 aa15.38■□□□□ 0.05
CASC4-202ENST00000345795 DDX19AQ9NUU7 478 aaKnown RBP15.38■□□□□ 0.05
CASC4-202ENST00000345795 EVX2Q03828 476 aa15.37■□□□□ 0.05
CASC4-202ENST00000345795 SLC44A5Q8NCS7 719 aa15.37■□□□□ 0.05
CASC4-202ENST00000345795 ZKSCAN5Q9Y2L8 839 aa15.37■□□□□ 0.05
CASC4-202ENST00000345795 ADD2P35612 726 aa15.37■□□□□ 0.05
CASC4-202ENST00000345795 ESR2Q92731 530 aa15.37■□□□□ 0.05
CASC4-202ENST00000345795 NAT10Q9H0A0 1025 aaKnown RBP15.37■□□□□ 0.05
CASC4-202ENST00000345795 ZSCAN16Q9H4T2 348 aaPredicted RBP15.37■□□□□ 0.05
CASC4-202ENST00000345795 PCDHA7Q9UN72 937 aa15.37■□□□□ 0.05
CASC4-202ENST00000345795 RIPOR2Q9Y4F9 1068 aa15.37■□□□□ 0.05
CASC4-202ENST00000345795 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.36■□□□□ 0.05
CASC4-202ENST00000345795 GPKOWQ92917 476 aaPredicted RBP eCLIP15.36■□□□□ 0.05
CASC4-202ENST00000345795 SOS2Q07890 1332 aaPredicted RBP15.36■□□□□ 0.05
CASC4-202ENST00000345795 PNOCQ13519 176 aa15.36■□□□□ 0.05
CASC4-202ENST00000345795 BRMS1Q9HCU9 246 aa15.36■□□□□ 0.05
CASC4-202ENST00000345795 CDC27P30260 824 aa15.36■□□□□ 0.05
CASC4-202ENST00000345795 GUCY1A2P33402 732 aa15.36■□□□□ 0.05
CASC4-202ENST00000345795 C11orf57Q6ZUT1 292 aaPredicted RBP15.36■□□□□ 0.05
CASC4-202ENST00000345795 VWA3AA6NCI4 1184 aa15.35■□□□□ 0.05
CASC4-202ENST00000345795 USP17L8P0C7I0 530 aa15.35■□□□□ 0.05
CASC4-202ENST00000345795 ENOX2Q16206 610 aaKnown RBP15.35■□□□□ 0.05
CASC4-202ENST00000345795 ZSWIM4Q9H7M6 989 aa15.35■□□□□ 0.05
CASC4-202ENST00000345795 COL15A1P39059 1388 aa15.35■□□□□ 0.05
CASC4-202ENST00000345795 PFKFB2O60825 505 aa15.35■□□□□ 0.05
CASC4-202ENST00000345795 TSPY3P0CV98 308 aa15.35■□□□□ 0.05
CASC4-202ENST00000345795 TSPY8P0CW00 308 aa15.35■□□□□ 0.05
CASC4-202ENST00000345795 CASP7P55210 303 aa15.35■□□□□ 0.05
CASC4-202ENST00000345795 APOA5Q6Q788 366 aa15.35■□□□□ 0.05
CASC4-202ENST00000345795 SCAF8Q9UPN6 1271 aaKnown RBP15.35■□□□□ 0.05
CASC4-202ENST00000345795 AKNAD1Q5T1N1 836 aa15.35■□□□□ 0.05
CASC4-202ENST00000345795 JMYQ8N9B5 988 aa15.35■□□□□ 0.05
CASC4-202ENST00000345795 IFNKQ9P0W0 207 aa15.35■□□□□ 0.05
CASC4-202ENST00000345795 TNKSO95271 1327 aa15.35■□□□□ 0.05
CASC4-202ENST00000345795 CACNB3P54284 484 aa15.34■□□□□ 0.05
CASC4-202ENST00000345795 SMARCC1Q92922 1105 aaPredicted RBP15.34■□□□□ 0.05
CASC4-202ENST00000345795 KNDC1Q76NI1 1749 aa15.34■□□□□ 0.05
CASC4-202ENST00000345795 POLR2DO15514 142 aaKnown RBP15.34■□□□□ 0.05
CASC4-202ENST00000345795 NOLC1Q14978 699 aaKnown RBP eCLIP15.34■□□□□ 0.05
CASC4-202ENST00000345795 PPARAQ07869 468 aa15.34■□□□□ 0.05
CASC4-202ENST00000345795 CCDC96Q2M329 555 aa15.34■□□□□ 0.05
CASC4-202ENST00000345795 MYSM1Q5VVJ2 828 aa15.34■□□□□ 0.05
CASC4-202ENST00000345795 PIK3AP1Q6ZUJ8 805 aa15.34■□□□□ 0.05
CASC4-202ENST00000345795 KAT14Q9H8E8 782 aa15.34■□□□□ 0.05
CASC4-202ENST00000345795 ANO10Q9NW15 660 aa15.34■□□□□ 0.05
CASC4-202ENST00000345795 IGSF3O75054 1194 aa15.33■□□□□ 0.05
CASC4-202ENST00000345795 LDHBP07195 334 aaKnown RBP15.33■□□□□ 0.05
CASC4-202ENST00000345795 ANO1Q5XXA6 986 aa15.33■□□□□ 0.05
CASC4-202ENST00000345795 TXNRD3Q86VQ6 643 aa15.33■□□□□ 0.05
CASC4-202ENST00000345795 LINC00116Q8NCU8 138 aa15.33■□□□□ 0.05
CASC4-202ENST00000345795 ECM2O94769 699 aaPredicted RBP15.33■□□□□ 0.04
CASC4-202ENST00000345795 GTF2IP78347 998 aa15.33■□□□□ 0.04
CASC4-202ENST00000345795 NCAPD2Q15021 1401 aa15.33■□□□□ 0.04
CASC4-202ENST00000345795 CARMIL3Q8ND23 1372 aa15.33■□□□□ 0.04
CASC4-202ENST00000345795 CRNKL1Q9BZJ0 848 aaKnown RBP15.33■□□□□ 0.04
CASC4-202ENST00000345795 GOLPH3LQ9H4A5 285 aa15.33■□□□□ 0.04
CASC4-202ENST00000345795 PYCARDQ9ULZ3 195 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms