RNA–Protein interactions for RNA: ENST00000345093.8

RNF41-201, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 5,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-201ENST00000345093 SLC26A6Q9BXS9 759 aa11.16□□□□□ -0.62
RNF41-201ENST00000345093 UBA5Q9GZZ9 404 aa11.16□□□□□ -0.62
RNF41-201ENST00000345093 EXOC7Q9UPT5 735 aa11.16□□□□□ -0.62
RNF41-201ENST00000345093 HEG1Q9ULI3 1381 aa11.15□□□□□ -0.62
RNF41-201ENST00000345093 IQSEC3Q9UPP2 1182 aaPredicted RBP11.15□□□□□ -0.62
RNF41-201ENST00000345093 ZNF804BA4D1E1 1349 aa11.15□□□□□ -0.62
RNF41-201ENST00000345093 ALKQ9UM73 1620 aa11.15□□□□□ -0.62
RNF41-201ENST00000345093 TICAM2Q86XR7 235 aa11.15□□□□□ -0.62
RNF41-201ENST00000345093 XAGE2Q96GT9 111 aa11.15□□□□□ -0.62
RNF41-201ENST00000345093 UQCRHLA0A096LP55 91 aa11.15□□□□□ -0.62
RNF41-201ENST00000345093 UQCRHP07919 91 aa11.15□□□□□ -0.62
RNF41-201ENST00000345093 TXNRD1Q16881 649 aa11.15□□□□□ -0.62
RNF41-201ENST00000345093 TNNI3KQ59H18 835 aa11.15□□□□□ -0.62
RNF41-201ENST00000345093 HAUS3Q68CZ6 603 aa11.15□□□□□ -0.62
RNF41-201ENST00000345093 ZNF771Q7L3S4 317 aaPredicted RBP11.15□□□□□ -0.62
RNF41-201ENST00000345093 MRPL11Q9Y3B7 192 aaKnown RBP11.15□□□□□ -0.62
RNF41-201ENST00000345093 FPGT-TNNI3KV9GXZ4 949 aa11.15□□□□□ -0.62
RNF41-201ENST00000345093 FIBPO43427 364 aa11.15□□□□□ -0.63
RNF41-201ENST00000345093 MMP10P09238 476 aa11.15□□□□□ -0.63
RNF41-201ENST00000345093 CWF19L2Q2TBE0 894 aaKnown RBP11.15□□□□□ -0.63
RNF41-201ENST00000345093 SEPT11Q9NVA2 429 aaKnown RBP11.15□□□□□ -0.63
RNF41-201ENST00000345093 LGR6Q9HBX8 967 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 GPR108Q9NPR9 543 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 HAUS2Q9NVX0 235 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 ANO10Q9NW15 660 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 USP17L3A6NCW0 530 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 USP17L4A6NCW7 530 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 SMARCA5O60264 1052 aaPredicted RBP11.14□□□□□ -0.63
RNF41-201ENST00000345093 GSDMDP57764 484 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 CCDC181Q5TID7 509 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 GADL1Q6ZQY3 521 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 USP17L1Q7RTZ2 530 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 CCDC112Q8NEF3 446 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 IFT74Q96LB3 600 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 PODXL2Q9NZ53 605 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 USP31Q70CQ4 1352 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 PABPN1LA6NDY0 278 aaKnown RBP11.14□□□□□ -0.63
RNF41-201ENST00000345093 MBD4O95243 580 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 SMTNP53814 917 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 SLC8A3P57103 927 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 MICU3Q86XE3 530 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 GTF3C2Q8WUA4 911 aaPredicted RBP11.14□□□□□ -0.63
RNF41-201ENST00000345093 SLC10A4Q96EP9 437 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 CPSF1Q10570 1443 aaKnown RBP11.14□□□□□ -0.63
RNF41-201ENST00000345093 H0YCG3 227 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 SETQ01105 290 aaPredicted RBP11.14□□□□□ -0.63
RNF41-201ENST00000345093 TAF4BQ92750 862 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 MEIS3Q99687 375 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 ESYT1Q9BSJ8 1104 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 ADD3Q9UEY8 706 aaKnown RBP11.14□□□□□ -0.63
RNF41-201ENST00000345093 CEP152O94986 1710 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 KLF18A0A0U1RQI7 1052 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 KRT2P35908 639 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 SLC1A4P43007 532 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 KCTD2Q14681 263 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 ATL3Q6DD88 541 aa11.14□□□□□ -0.63
RNF41-201ENST00000345093 CCAR2Q8N163 923 aaKnown RBP11.14□□□□□ -0.63
RNF41-201ENST00000345093 ZSCAN23Q3MJ62 389 aa11.13□□□□□ -0.63
RNF41-201ENST00000345093 HELBQ8NG08 1087 aaPredicted RBP11.13□□□□□ -0.63
RNF41-201ENST00000345093 AP5M1Q9H0R1 490 aa11.13□□□□□ -0.63
RNF41-201ENST00000345093 RNF214Q8ND24 703 aa11.13□□□□□ -0.63
RNF41-201ENST00000345093 JPH2Q9BR39 696 aaPredicted RBP11.13□□□□□ -0.63
RNF41-201ENST00000345093 EXOC1Q9NV70 894 aa11.13□□□□□ -0.63
RNF41-201ENST00000345093 MYO3AQ8NEV4 1616 aa11.13□□□□□ -0.63
RNF41-201ENST00000345093 ZBTB7BO15156 539 aaPredicted RBP11.13□□□□□ -0.63
RNF41-201ENST00000345093 PRC1O43663 620 aa11.13□□□□□ -0.63
RNF41-201ENST00000345093 PHACTR2O75167 634 aa11.13□□□□□ -0.63
RNF41-201ENST00000345093 NEURL1BA8MQ27 555 aa11.13□□□□□ -0.63
RNF41-201ENST00000345093 PDE1AP54750 535 aa11.13□□□□□ -0.63
RNF41-201ENST00000345093 CEBPZQ03701 1054 aaKnown RBP11.12□□□□□ -0.63
RNF41-201ENST00000345093 CLTCL1P53675 1640 aa11.12□□□□□ -0.63
RNF41-201ENST00000345093 FAM13AO94988 1023 aa11.12□□□□□ -0.63
RNF41-201ENST00000345093 TTLL7Q6ZT98 887 aa11.12□□□□□ -0.63
RNF41-201ENST00000345093 TBC1D5Q92609 795 aa11.12□□□□□ -0.63
RNF41-201ENST00000345093 DDX12PQ92771 950 aa11.12□□□□□ -0.63
RNF41-201ENST00000345093 WWC3Q9ULE0 1092 aa11.12□□□□□ -0.63
RNF41-201ENST00000345093 SYCE3A1L190 88 aa11.12□□□□□ -0.63
RNF41-201ENST00000345093 FBLN1P23142 703 aa11.12□□□□□ -0.63
RNF41-201ENST00000345093 ABCD1P33897 745 aa11.12□□□□□ -0.63
RNF41-201ENST00000345093 ECE1P42892 770 aa11.12□□□□□ -0.63
RNF41-201ENST00000345093 JARID2Q92833 1246 aaPredicted RBP11.12□□□□□ -0.63
RNF41-201ENST00000345093 ABCC4O15439 1325 aa11.12□□□□□ -0.63
RNF41-201ENST00000345093 INO80Q9ULG1 1556 aaPredicted RBP11.12□□□□□ -0.63
RNF41-201ENST00000345093 ARHGEF37A1IGU5 675 aa11.12□□□□□ -0.63
RNF41-201ENST00000345093 SDSP20132 328 aa11.12□□□□□ -0.63
RNF41-201ENST00000345093 HS2ST1Q7LGA3 356 aa11.12□□□□□ -0.63
RNF41-201ENST00000345093 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.12□□□□□ -0.63
RNF41-201ENST00000345093 ZSCAN22P10073 491 aaPredicted RBP11.11□□□□□ -0.63
RNF41-201ENST00000345093 PPM1FP49593 454 aaPredicted RBP11.11□□□□□ -0.63
RNF41-201ENST00000345093 CACNA2D4Q7Z3S7 1137 aa11.11□□□□□ -0.63
RNF41-201ENST00000345093 PHACTR3Q96KR7 559 aa11.11□□□□□ -0.63
RNF41-201ENST00000345093 RNF181Q9P0P0 153 aa11.11□□□□□ -0.63
RNF41-201ENST00000345093 CGNQ9P2M7 1197 aaKnown RBP11.11□□□□□ -0.63
RNF41-201ENST00000345093 XRCC6P12956 609 aaKnown RBP eCLIP11.11□□□□□ -0.63
RNF41-201ENST00000345093 CCDC40Q4G0X9 1142 aa11.11□□□□□ -0.63
RNF41-201ENST00000345093 CEP85Q6P2H3 762 aa11.11□□□□□ -0.63
RNF41-201ENST00000345093 PNMA8AQ86V59 439 aaPredicted RBP11.11□□□□□ -0.63
RNF41-201ENST00000345093 ZNF592Q92610 1267 aa11.11□□□□□ -0.63
RNF41-201ENST00000345093 TCHPQ9BT92 498 aa11.11□□□□□ -0.63
RNF41-201ENST00000345093 GOLGA6L9A6NEM1 432 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms