RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 ASIC1P78348 528 aa9.3□□□□□ -0.92
MCPH1-201ENST00000344683 SULT6B1Q6IMI4 303 aa9.3□□□□□ -0.92
MCPH1-201ENST00000344683 MRPL46Q9H2W6 279 aaKnown RBP9.3□□□□□ -0.92
MCPH1-201ENST00000344683 BIVM-ERCC5R4GMW8 1640 aa9.3□□□□□ -0.92
MCPH1-201ENST00000344683 WDR46O15213 610 aaKnown RBP9.3□□□□□ -0.92
MCPH1-201ENST00000344683 PCYT1AP49585 367 aa9.3□□□□□ -0.92
MCPH1-201ENST00000344683 RNASELQ05823 741 aaKnown RBP9.3□□□□□ -0.92
MCPH1-201ENST00000344683 HAUS1Q96CS2 278 aa9.3□□□□□ -0.92
MCPH1-201ENST00000344683 SPTLC2O15270 562 aa9.3□□□□□ -0.92
MCPH1-201ENST00000344683 STARD3NLO95772 234 aa9.3□□□□□ -0.92
MCPH1-201ENST00000344683 NCBP1Q09161 790 aaKnown RBP9.3□□□□□ -0.92
MCPH1-201ENST00000344683 KIFC2Q96AC6 838 aa9.3□□□□□ -0.92
MCPH1-201ENST00000344683 ALG1Q9BT22 464 aa9.3□□□□□ -0.92
MCPH1-201ENST00000344683 HMGXB3Q12766 1538 aa9.3□□□□□ -0.92
MCPH1-201ENST00000344683 EHBP1L1Q8N3D4 1523 aa9.3□□□□□ -0.92
MCPH1-201ENST00000344683 ARHGAP5Q13017 1502 aa9.3□□□□□ -0.92
MCPH1-201ENST00000344683 ARHGEF9O43307 516 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 FBXO41Q8TF61 875 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 RGS16O15492 202 aaPredicted RBP9.29□□□□□ -0.92
MCPH1-201ENST00000344683 MYL5Q02045 173 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 TACO1Q9BSH4 297 aaKnown RBP9.29□□□□□ -0.92
MCPH1-201ENST00000344683 POLE3Q9NRF9 147 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 CASKIN1Q8WXD9 1431 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 EPB41P11171 864 aaKnown RBP9.29□□□□□ -0.92
MCPH1-201ENST00000344683 ZBTB12Q9Y330 459 aaPredicted RBP9.29□□□□□ -0.92
MCPH1-201ENST00000344683 HECW1Q76N89 1606 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 ARHGAP42A6NI28 874 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 APBA1Q02410 837 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 LIN9Q5TKA1 542 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 ZC3H15Q8WU90 426 aaKnown RBP9.29□□□□□ -0.92
MCPH1-201ENST00000344683 PALMDQ9NP74 551 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 TMPOP42166 694 aaKnown RBP9.29□□□□□ -0.92
MCPH1-201ENST00000344683 HS2ST1Q7LGA3 356 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 FCHSD1Q86WN1 690 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 ZKSCAN3Q9BRR0 538 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 TUBB6Q9BUF5 446 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 DAAM1Q9Y4D1 1078 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 ZBTB43O43298 467 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 BAG3O95817 575 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 STX2P32856 288 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 KRT2P35908 639 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 GJC1P36383 396 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 RAP1GDS1P52306 607 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 RARSP54136 660 aaKnown RBP9.29□□□□□ -0.92
MCPH1-201ENST00000344683 WTAPQ15007 396 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 TRIM60Q495X7 471 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 ANKRD50Q9ULJ7 1429 aa9.29□□□□□ -0.92
MCPH1-201ENST00000344683 BAG2O95816 211 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 ATP6V1E1P36543 226 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 IFIT5Q13325 482 aaKnown RBP9.28□□□□□ -0.92
MCPH1-201ENST00000344683 MICU3Q86XE3 530 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 TTC16Q8NEE8 873 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 HAUS7Q99871 368 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 SERPINB6P35237 376 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 TMTC1Q8IUR5 882 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 SECISBP2LQ93073 1101 aaKnown RBP9.28□□□□□ -0.92
MCPH1-201ENST00000344683 ABTB1Q969K4 478 aaPredicted RBP9.28□□□□□ -0.92
MCPH1-201ENST00000344683 SCHIP1Q9P0W5 487 aaPredicted RBP9.28□□□□□ -0.92
MCPH1-201ENST00000344683 HSPA8P11142 646 aaKnown RBP9.28□□□□□ -0.92
MCPH1-201ENST00000344683 NUCB1Q02818 461 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 DYNC1I2Q13409 638 aaKnown RBP9.28□□□□□ -0.92
MCPH1-201ENST00000344683 RPS6KA2Q15349 733 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 IFIT1BQ5T764 474 aaKnown RBP9.28□□□□□ -0.92
MCPH1-201ENST00000344683 IWS1Q96ST2 819 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 YY1AP1Q9H869 796 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 GIMAP4Q9NUV9 329 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 ANKFY1Q9P2R3 1169 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 RTL9Q8NET4 1388 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 SPOPO43791 374 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 CREB3O43889 395 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 SMARCA5O60264 1052 aaPredicted RBP9.28□□□□□ -0.92
MCPH1-201ENST00000344683 KCNA4P22459 653 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 RTN1Q16799 776 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 LEO1Q8WVC0 666 aaPredicted RBP9.28□□□□□ -0.92
MCPH1-201ENST00000344683 TYW1Q9NV66 732 aaKnown RBP9.28□□□□□ -0.92
MCPH1-201ENST00000344683 BAG5Q9UL15 447 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 STK24Q9Y6E0 443 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 TTC4O95801 387 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 CLTAP09496 248 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 LRGUKQ96M69 825 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 NPHP3Q7Z494 1330 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 KRT15P19012 456 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 PAWRQ96IZ0 340 aaKnown RBP9.28□□□□□ -0.92
MCPH1-201ENST00000344683 TSC22D3Q99576 134 aa9.28□□□□□ -0.92
MCPH1-201ENST00000344683 POTEB3A0JP26 581 aa9.27□□□□□ -0.92
MCPH1-201ENST00000344683 ARHGAP6O43182 974 aa9.27□□□□□ -0.92
MCPH1-201ENST00000344683 SUN1O94901 812 aa9.27□□□□□ -0.92
MCPH1-201ENST00000344683 POTEBQ6S5H4 581 aa9.27□□□□□ -0.92
MCPH1-201ENST00000344683 IGSF22Q8N9C0 903 aa9.27□□□□□ -0.92
MCPH1-201ENST00000344683 N4BP2L2Q92802 583 aaPredicted RBP9.27□□□□□ -0.92
MCPH1-201ENST00000344683 RABEP2Q9H5N1 569 aa9.27□□□□□ -0.92
MCPH1-201ENST00000344683 SPINK5Q9NQ38 1064 aaPredicted RBP9.27□□□□□ -0.92
MCPH1-201ENST00000344683 ECHDC1Q9NTX5 307 aa9.27□□□□□ -0.92
MCPH1-201ENST00000344683 CALM1P0DP23 149 aa9.27□□□□□ -0.93
MCPH1-201ENST00000344683 CALM2P0DP24 149 aa9.27□□□□□ -0.93
MCPH1-201ENST00000344683 CALM3P0DP25 149 aa9.27□□□□□ -0.93
MCPH1-201ENST00000344683 DNM1Q05193 864 aaKnown RBP9.27□□□□□ -0.93
MCPH1-201ENST00000344683 ASIC2Q16515 512 aa9.27□□□□□ -0.93
MCPH1-201ENST00000344683 GRAMD4Q6IC98 578 aa9.27□□□□□ -0.93
MCPH1-201ENST00000344683 CNNM4Q6P4Q7 775 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms