RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 TCEANC2Q96MN5 208 aa26.09■■□□□ 1.77
CACNB1-201ENST00000344140 KIAA1551Q9HCM1 1747 aa26.09■■□□□ 1.77
CACNB1-201ENST00000344140 AATFQ9NY61 560 aaKnown RBP eCLIP26.08■■□□□ 1.77
CACNB1-201ENST00000344140 SNED1Q8TER0 1413 aa26.08■■□□□ 1.77
CACNB1-201ENST00000344140 KCNA3P22001 575 aa26.08■■□□□ 1.77
CACNB1-201ENST00000344140 FGD1P98174 961 aa26.08■■□□□ 1.77
CACNB1-201ENST00000344140 Q6ZUG5 572 aa26.08■■□□□ 1.77
CACNB1-201ENST00000344140 NOL10Q9BSC4 688 aaKnown RBP26.08■■□□□ 1.77
CACNB1-201ENST00000344140 NBPF3Q9H094 633 aa26.08■■□□□ 1.77
CACNB1-201ENST00000344140 LAMA4Q16363 1823 aa26.07■■□□□ 1.76
CACNB1-201ENST00000344140 BAG3O95817 575 aa26.07■■□□□ 1.76
CACNB1-201ENST00000344140 GRIK5Q16478 980 aa26.07■■□□□ 1.76
CACNB1-201ENST00000344140 DOK7Q18PE1 504 aa26.07■■□□□ 1.76
CACNB1-201ENST00000344140 RTKN2Q8IZC4 609 aa26.07■■□□□ 1.76
CACNB1-201ENST00000344140 SDR42E1Q8WUS8 393 aa26.07■■□□□ 1.76
CACNB1-201ENST00000344140 LARP6Q9BRS8 491 aaKnown RBP26.07■■□□□ 1.76
CACNB1-201ENST00000344140 TPCN1Q9ULQ1 816 aa26.07■■□□□ 1.76
CACNB1-201ENST00000344140 C21orf2O43822 256 aa26.06■■□□□ 1.76
CACNB1-201ENST00000344140 MCM5P33992 734 aa26.06■■□□□ 1.76
CACNB1-201ENST00000344140 CCDC93Q567U6 631 aa26.06■■□□□ 1.76
CACNB1-201ENST00000344140 TBC1D10CQ8IV04 446 aa26.06■■□□□ 1.76
CACNB1-201ENST00000344140 FBXL16Q8N461 479 aa26.06■■□□□ 1.76
CACNB1-201ENST00000344140 FHDC1Q9C0D6 1143 aaPredicted RBP26.06■■□□□ 1.76
CACNB1-201ENST00000344140 WDR19Q8NEZ3 1342 aa26.06■■□□□ 1.76
CACNB1-201ENST00000344140 PPP4CP60510 307 aa26.06■■□□□ 1.76
CACNB1-201ENST00000344140 MB21D2Q8IYB1 491 aaPredicted RBP26.06■■□□□ 1.76
CACNB1-201ENST00000344140 AGXT2Q9BYV1 514 aa26.06■■□□□ 1.76
CACNB1-201ENST00000344140 ATP8A2Q9NTI2 1148 aa26.06■■□□□ 1.76
CACNB1-201ENST00000344140 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.06■■□□□ 1.76
CACNB1-201ENST00000344140 MROH7-TTC4A0A0A0MT08 1334 aa26.06■■□□□ 1.76
CACNB1-201ENST00000344140 FAM163AQ96GL9 167 aaPredicted RBP26.05■■□□□ 1.76
CACNB1-201ENST00000344140 DIXDC1Q155Q3 683 aa26.04■■□□□ 1.76
CACNB1-201ENST00000344140 ME3Q16798 604 aa26.04■■□□□ 1.76
CACNB1-201ENST00000344140 CNNM2Q9H8M5 875 aa26.04■■□□□ 1.76
CACNB1-201ENST00000344140 KIAA2012Q0VF49 1180 aa26.04■■□□□ 1.76
CACNB1-201ENST00000344140 SOGA3Q5TF21 947 aa26.04■■□□□ 1.76
CACNB1-201ENST00000344140 PIM2Q9P1W9 311 aa26.04■■□□□ 1.76
CACNB1-201ENST00000344140 ANAPC4Q9UJX5 808 aa26.04■■□□□ 1.76
CACNB1-201ENST00000344140 LARGE1O95461 756 aa26.03■■□□□ 1.76
CACNB1-201ENST00000344140 NUCB2P80303 420 aa26.03■■□□□ 1.76
CACNB1-201ENST00000344140 AKNAD1Q5T1N1 836 aa26.03■■□□□ 1.76
CACNB1-201ENST00000344140 FBXW7Q969H0 707 aa26.03■■□□□ 1.76
CACNB1-201ENST00000344140 RNF41Q9H4P4 317 aaPredicted RBP26.03■■□□□ 1.76
CACNB1-201ENST00000344140 PPARAQ07869 468 aa26.02■■□□□ 1.76
CACNB1-201ENST00000344140 NLGN2Q8NFZ4 835 aa26.02■■□□□ 1.76
CACNB1-201ENST00000344140 STAG1Q8WVM7 1258 aa26.02■■□□□ 1.76
CACNB1-201ENST00000344140 BRF1Q92994 677 aa26.02■■□□□ 1.76
CACNB1-201ENST00000344140 PSMD1Q99460 953 aa26.02■■□□□ 1.76
CACNB1-201ENST00000344140 DBNDD1Q9H9R9 158 aa26.02■■□□□ 1.76
CACNB1-201ENST00000344140 CHD4Q14839 1912 aa26.02■■□□□ 1.76
CACNB1-201ENST00000344140 PRC1O43663 620 aa26.02■■□□□ 1.76
CACNB1-201ENST00000344140 PLCG2P16885 1265 aa26.02■■□□□ 1.76
CACNB1-201ENST00000344140 MFSD6Q6ZSS7 791 aa26.02■■□□□ 1.76
CACNB1-201ENST00000344140 LRRC2Q9BYS8 371 aa26.02■■□□□ 1.76
CACNB1-201ENST00000344140 KRT23Q9C075 422 aa26.02■■□□□ 1.76
CACNB1-201ENST00000344140 TIAM2Q8IVF5 1701 aa26.02■■□□□ 1.76
CACNB1-201ENST00000344140 GPR75-ASB3A0A0A6YYF3 556 aa26.01■■□□□ 1.75
CACNB1-201ENST00000344140 ECE2O60344 883 aa26.01■■□□□ 1.75
CACNB1-201ENST00000344140 FKBP1AP62942 108 aaKnown RBP26.01■■□□□ 1.75
CACNB1-201ENST00000344140 RAB3GAP1Q15042 981 aa26.01■■□□□ 1.75
CACNB1-201ENST00000344140 DCP1AQ9NPI6 582 aaPredicted RBP26.01■■□□□ 1.75
CACNB1-201ENST00000344140 GAKO14976 1311 aa26■■□□□ 1.75
CACNB1-201ENST00000344140 CTDSPL2Q05D32 466 aa26■■□□□ 1.75
CACNB1-201ENST00000344140 STRIP1Q5VSL9 837 aa26■■□□□ 1.75
CACNB1-201ENST00000344140 CCDC83Q8IWF9 413 aa26■■□□□ 1.75
CACNB1-201ENST00000344140 AOC3Q16853 763 aa26■■□□□ 1.75
CACNB1-201ENST00000344140 SYT17Q9BSW7 474 aa26■■□□□ 1.75
CACNB1-201ENST00000344140 MINDY4BA8MYZ0 360 aa25.99■■□□□ 1.75
CACNB1-201ENST00000344140 PCP11498 1178 aaKnown RBP25.99■■□□□ 1.75
CACNB1-201ENST00000344140 CHST3Q7LGC8 479 aa25.99■■□□□ 1.75
CACNB1-201ENST00000344140 CERS5Q8N5B7 392 aa25.99■■□□□ 1.75
CACNB1-201ENST00000344140 VPS33BQ9H267 617 aa25.99■■□□□ 1.75
CACNB1-201ENST00000344140 ARPP21Q9UBL0 812 aaPredicted RBP25.99■■□□□ 1.75
CACNB1-201ENST00000344140 MYH2Q9UKX2 1941 aa25.99■■□□□ 1.75
CACNB1-201ENST00000344140 NEDD4P46934 1319 aa25.98■■□□□ 1.75
CACNB1-201ENST00000344140 PPIP5K2O43314 1243 aa25.98■■□□□ 1.75
CACNB1-201ENST00000344140 BTDP43251 543 aa25.98■■□□□ 1.75
CACNB1-201ENST00000344140 ANTXR2P58335 489 aa25.98■■□□□ 1.75
CACNB1-201ENST00000344140 DALRD3Q5D0E6 543 aaKnown RBP25.98■■□□□ 1.75
CACNB1-201ENST00000344140 CTR9Q6PD62 1173 aa25.98■■□□□ 1.75
CACNB1-201ENST00000344140 SMC3Q9UQE7 1217 aa25.98■■□□□ 1.75
CACNB1-201ENST00000344140 BRCA1P38398 1863 aaKnown RBP25.98■■□□□ 1.75
CACNB1-201ENST00000344140 EVCP57679 992 aa25.98■■□□□ 1.75
CACNB1-201ENST00000344140 SBK1Q52WX2 424 aa25.98■■□□□ 1.75
CACNB1-201ENST00000344140 SH3RF3Q8TEJ3 882 aaPredicted RBP25.98■■□□□ 1.75
CACNB1-201ENST00000344140 B4E1Z4 1266 aa25.97■■□□□ 1.75
CACNB1-201ENST00000344140 USP17L12C9JPN9 530 aa25.97■■□□□ 1.75
CACNB1-201ENST00000344140 USP17L21D6R901 530 aa25.97■■□□□ 1.75
CACNB1-201ENST00000344140 USP5P45974 858 aa25.97■■□□□ 1.75
CACNB1-201ENST00000344140 NECAB1Q8N987 351 aa25.97■■□□□ 1.75
CACNB1-201ENST00000344140 CHMP4CQ96CF2 233 aa25.97■■□□□ 1.75
CACNB1-201ENST00000344140 TMEM87BQ96K49 555 aa25.97■■□□□ 1.75
CACNB1-201ENST00000344140 TTF2Q9UNY4 1162 aaKnown RBP25.97■■□□□ 1.75
CACNB1-201ENST00000344140 USP17L3A6NCW0 530 aa25.96■■□□□ 1.75
CACNB1-201ENST00000344140 USP17L4A6NCW7 530 aa25.96■■□□□ 1.75
CACNB1-201ENST00000344140 NFKBIBQ15653 356 aa25.96■■□□□ 1.75
CACNB1-201ENST00000344140 USP17L1Q7RTZ2 530 aa25.96■■□□□ 1.75
CACNB1-201ENST00000344140 GTF3C6Q969F1 213 aa25.96■■□□□ 1.75
CACNB1-201ENST00000344140 ZNF274Q96GC6 653 aaPredicted RBP25.96■■□□□ 1.75
CACNB1-201ENST00000344140 SLC3A2P08195 630 aaKnown RBP25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms