RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 PSME4Q14997 1843 aa17.49■□□□□ 0.39
CXCL12-201ENST00000343575 MROH7-TTC4A0A0A0MT08 1334 aa17.49■□□□□ 0.39
CXCL12-201ENST00000343575 GAKO14976 1311 aa17.49■□□□□ 0.39
CXCL12-201ENST00000343575 USP17L3A6NCW0 530 aa17.49■□□□□ 0.39
CXCL12-201ENST00000343575 USP17L4A6NCW7 530 aa17.49■□□□□ 0.39
CXCL12-201ENST00000343575 FKBP1AP62942 108 aaKnown RBP17.49■□□□□ 0.39
CXCL12-201ENST00000343575 RNF20Q5VTR2 975 aa17.49■□□□□ 0.39
CXCL12-201ENST00000343575 USP17L1Q7RTZ2 530 aa17.49■□□□□ 0.39
CXCL12-201ENST00000343575 ZKSCAN1P17029 563 aaPredicted RBP17.48■□□□□ 0.39
CXCL12-201ENST00000343575 GNAT2P19087 354 aa17.48■□□□□ 0.39
CXCL12-201ENST00000343575 NEK4P51957 841 aa17.48■□□□□ 0.39
CXCL12-201ENST00000343575 PPP4CP60510 307 aa17.48■□□□□ 0.39
CXCL12-201ENST00000343575 JAKMIP1Q96N16 626 aaKnown RBP17.48■□□□□ 0.39
CXCL12-201ENST00000343575 TM6SF1Q9BZW5 370 aa17.48■□□□□ 0.39
CXCL12-201ENST00000343575 ZSWIM6Q9HCJ5 1215 aa17.48■□□□□ 0.39
CXCL12-201ENST00000343575 ZMYM6O95789 1325 aa17.48■□□□□ 0.39
CXCL12-201ENST00000343575 LTBP3Q9NS15 1303 aa17.48■□□□□ 0.39
CXCL12-201ENST00000343575 GPR75-ASB3A0A0A6YYF3 556 aa17.48■□□□□ 0.39
CXCL12-201ENST00000343575 F8W031 263 aaPredicted RBP17.48■□□□□ 0.39
CXCL12-201ENST00000343575 APPP05067 770 aa17.48■□□□□ 0.39
CXCL12-201ENST00000343575 RASSF7Q02833 373 aa17.48■□□□□ 0.39
CXCL12-201ENST00000343575 TTC14Q96N46 770 aa17.48■□□□□ 0.39
CXCL12-201ENST00000343575 TACC3Q9Y6A5 838 aa17.48■□□□□ 0.39
CXCL12-201ENST00000343575 HAND2P61296 217 aa17.47■□□□□ 0.39
CXCL12-201ENST00000343575 GSTO1P78417 241 aa17.47■□□□□ 0.39
CXCL12-201ENST00000343575 MKRN1Q9UHC7 482 aaKnown RBP17.47■□□□□ 0.39
CXCL12-201ENST00000343575 CTNNA3Q9UI47 895 aa17.47■□□□□ 0.39
CXCL12-201ENST00000343575 ISY1Q9ULR0 285 aaKnown RBP17.47■□□□□ 0.39
CXCL12-201ENST00000343575 TTF2Q9UNY4 1162 aaKnown RBP17.47■□□□□ 0.39
CXCL12-201ENST00000343575 DAGLAQ9Y4D2 1042 aa17.47■□□□□ 0.39
CXCL12-201ENST00000343575 SMIM22K7EJ46 135 aa17.46■□□□□ 0.39
CXCL12-201ENST00000343575 LDHCP07864 332 aa17.46■□□□□ 0.39
CXCL12-201ENST00000343575 CASTP20810 708 aaKnown RBP17.46■□□□□ 0.39
CXCL12-201ENST00000343575 NKX2-3Q8TAU0 364 aa17.46■□□□□ 0.39
CXCL12-201ENST00000343575 SH3RF3Q8TEJ3 882 aaPredicted RBP17.46■□□□□ 0.39
CXCL12-201ENST00000343575 ADAMTSL1Q8N6G6 1762 aa17.46■□□□□ 0.39
CXCL12-201ENST00000343575 E7EWF7 191 aa17.46■□□□□ 0.38
CXCL12-201ENST00000343575 RAD17O75943 681 aa17.46■□□□□ 0.38
CXCL12-201ENST00000343575 VIL1P09327 827 aaKnown RBP17.46■□□□□ 0.38
CXCL12-201ENST00000343575 BTDP43251 543 aa17.46■□□□□ 0.38
CXCL12-201ENST00000343575 SCNN1DP51172 638 aa17.46■□□□□ 0.38
CXCL12-201ENST00000343575 RHBDL3P58872 404 aa17.46■□□□□ 0.38
CXCL12-201ENST00000343575 KIAA0825Q8IV33 1275 aa17.46■□□□□ 0.38
CXCL12-201ENST00000343575 ZNRF3Q9ULT6 936 aa17.46■□□□□ 0.38
CXCL12-201ENST00000343575 BAZ2AQ9UIF9 1905 aaKnown RBP17.45■□□□□ 0.38
CXCL12-201ENST00000343575 PSMD14O00487 310 aa17.45■□□□□ 0.38
CXCL12-201ENST00000343575 IMMTQ16891 758 aaKnown RBP17.45■□□□□ 0.38
CXCL12-201ENST00000343575 TBC1D10CQ8IV04 446 aa17.45■□□□□ 0.38
CXCL12-201ENST00000343575 GMLQ99445 158 aa17.45■□□□□ 0.38
CXCL12-201ENST00000343575 DCP1AQ9NPI6 582 aaPredicted RBP17.45■□□□□ 0.38
CXCL12-201ENST00000343575 PCDHAC2Q9Y5I4 1007 aa17.45■□□□□ 0.38
CXCL12-201ENST00000343575 LAMA4Q16363 1823 aa17.44■□□□□ 0.38
CXCL12-201ENST00000343575 RUFY3Q7L099 469 aa17.44■□□□□ 0.38
CXCL12-201ENST00000343575 NAPBQ9H115 298 aa17.44■□□□□ 0.38
CXCL12-201ENST00000343575 CDK5RAP2Q96SN8 1893 aa17.44■□□□□ 0.38
CXCL12-201ENST00000343575 ZNF213O14771 459 aa17.44■□□□□ 0.38
CXCL12-201ENST00000343575 EVX2Q03828 476 aa17.44■□□□□ 0.38
CXCL12-201ENST00000343575 CXCL9Q07325 125 aa17.44■□□□□ 0.38
CXCL12-201ENST00000343575 APOBEC3HQ6NTF7 200 aaKnown RBP17.44■□□□□ 0.38
CXCL12-201ENST00000343575 HHIPL2Q6UWX4 724 aa17.44■□□□□ 0.38
CXCL12-201ENST00000343575 NIM1KQ8IY84 436 aa17.44■□□□□ 0.38
CXCL12-201ENST00000343575 NEK1Q96PY6 1258 aa17.44■□□□□ 0.38
CXCL12-201ENST00000343575 MRIQ9BWK5 157 aa17.44■□□□□ 0.38
CXCL12-201ENST00000343575 CRNKL1Q9BZJ0 848 aaKnown RBP17.44■□□□□ 0.38
CXCL12-201ENST00000343575 INCENPQ9NQS7 918 aa17.44■□□□□ 0.38
CXCL12-201ENST00000343575 BAG3O95817 575 aa17.43■□□□□ 0.38
CXCL12-201ENST00000343575 PSMA5P28066 241 aa17.43■□□□□ 0.38
CXCL12-201ENST00000343575 KRT32Q14532 448 aa17.43■□□□□ 0.38
CXCL12-201ENST00000343575 GIMAP6Q6P9H5 292 aa17.43■□□□□ 0.38
CXCL12-201ENST00000343575 RSBN1LQ6PCB5 846 aaPredicted RBP17.43■□□□□ 0.38
CXCL12-201ENST00000343575 TCEANC2Q96MN5 208 aa17.43■□□□□ 0.38
CXCL12-201ENST00000343575 CYP2D7A0A087X1C5 515 aa17.42■□□□□ 0.38
CXCL12-201ENST00000343575 GOLGA6L3A6NEY3 463 aa17.42■□□□□ 0.38
CXCL12-201ENST00000343575 ST18O60284 1047 aa17.42■□□□□ 0.38
CXCL12-201ENST00000343575 RPS6KB1P23443 525 aa17.42■□□□□ 0.38
CXCL12-201ENST00000343575 TDO2P48775 406 aa17.42■□□□□ 0.38
CXCL12-201ENST00000343575 CTDSPL2Q05D32 466 aa17.42■□□□□ 0.38
CXCL12-201ENST00000343575 CTR9Q6PD62 1173 aa17.42■□□□□ 0.38
CXCL12-201ENST00000343575 SLF2Q8IX21 1173 aa17.42■□□□□ 0.38
CXCL12-201ENST00000343575 NACAP1Q9BZK3 213 aa17.42■□□□□ 0.38
CXCL12-201ENST00000343575 ATP8A2Q9NTI2 1148 aa17.42■□□□□ 0.38
CXCL12-201ENST00000343575 CYP46A1Q9Y6A2 500 aa17.42■□□□□ 0.38
CXCL12-201ENST00000343575 FSD2A1L4K1 749 aa17.41■□□□□ 0.38
CXCL12-201ENST00000343575 K7ELQ4 463 aaPredicted RBP17.41■□□□□ 0.38
CXCL12-201ENST00000343575 YBX3P16989 372 aaKnown RBP eCLIP17.41■□□□□ 0.38
CXCL12-201ENST00000343575 CRKP46108 304 aa17.41■□□□□ 0.38
CXCL12-201ENST00000343575 AK2P54819 239 aa17.41■□□□□ 0.38
CXCL12-201ENST00000343575 EXOSC10Q01780 885 aaKnown RBP17.41■□□□□ 0.38
CXCL12-201ENST00000343575 ZBTB12Q9Y330 459 aaPredicted RBP17.41■□□□□ 0.38
CXCL12-201ENST00000343575 USP17L12C9JPN9 530 aa17.41■□□□□ 0.38
CXCL12-201ENST00000343575 USP17L21D6R901 530 aa17.41■□□□□ 0.38
CXCL12-201ENST00000343575 HDLBPQ00341 1268 aaKnown RBP17.41■□□□□ 0.38
CXCL12-201ENST00000343575 BLOC1S2Q6QNY1 142 aa17.41■□□□□ 0.38
CXCL12-201ENST00000343575 HSCBQ8IWL3 235 aa17.41■□□□□ 0.38
CXCL12-201ENST00000343575 TEKT1Q969V4 418 aa17.41■□□□□ 0.38
CXCL12-201ENST00000343575 ZDHHC15Q96MV8 337 aa17.41■□□□□ 0.38
CXCL12-201ENST00000343575 TIAM2Q8IVF5 1701 aa17.41■□□□□ 0.38
CXCL12-201ENST00000343575 PPARAQ07869 468 aa17.4■□□□□ 0.38
CXCL12-201ENST00000343575 GLIPR1L2Q4G1C9 344 aa17.4■□□□□ 0.38
CXCL12-201ENST00000343575 TGFBRAP1Q8WUH2 860 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms