RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 HIC1Q14526 733 aa15.18■□□□□ 0.02
ATXN3-201ENST00000340660 SLC10A5Q5PT55 438 aa15.18■□□□□ 0.02
ATXN3-201ENST00000340660 SMYD5Q6GMV2 418 aa15.18■□□□□ 0.02
ATXN3-201ENST00000340660 ZNF516Q92618 1163 aa15.18■□□□□ 0.02
ATXN3-201ENST00000340660 MYPNQ86TC9 1320 aa15.17■□□□□ 0.02
ATXN3-201ENST00000340660 GPR37O15354 613 aa15.17■□□□□ 0.02
ATXN3-201ENST00000340660 PSMC4P43686 418 aa15.17■□□□□ 0.02
ATXN3-201ENST00000340660 SLC4A3P48751 1232 aa15.17■□□□□ 0.02
ATXN3-201ENST00000340660 TMEM31Q5JXX7 168 aa15.17■□□□□ 0.02
ATXN3-201ENST00000340660 IL17REQ8NFR9 667 aa15.17■□□□□ 0.02
ATXN3-201ENST00000340660 LAMB2P55268 1798 aa15.16■□□□□ 0.02
ATXN3-201ENST00000340660 ERVV-1B6SEH8 477 aa15.16■□□□□ 0.02
ATXN3-201ENST00000340660 SASH1O94885 1247 aa15.16■□□□□ 0.02
ATXN3-201ENST00000340660 CAPN2P17655 700 aa15.16■□□□□ 0.02
ATXN3-201ENST00000340660 GPSM2P81274 684 aa15.16■□□□□ 0.02
ATXN3-201ENST00000340660 TEFQ10587 303 aa15.16■□□□□ 0.02
ATXN3-201ENST00000340660 ZNF34Q8IZ26 560 aa15.16■□□□□ 0.02
ATXN3-201ENST00000340660 PAK6Q9NQU5 681 aaPredicted RBP15.16■□□□□ 0.02
ATXN3-201ENST00000340660 CACNA1GO43497 2377 aa15.16■□□□□ 0.02
ATXN3-201ENST00000340660 CCL15-CCL14A0A0B4J2E2 113 aa15.15■□□□□ 0.02
ATXN3-201ENST00000340660 UNCXA6NJT0 531 aa15.15■□□□□ 0.02
ATXN3-201ENST00000340660 IL13P35225 146 aa15.15■□□□□ 0.02
ATXN3-201ENST00000340660 CCL15Q16663 113 aa15.15■□□□□ 0.02
ATXN3-201ENST00000340660 OPTNQ96CV9 577 aa15.15■□□□□ 0.02
ATXN3-201ENST00000340660 EYA3Q99504 573 aa15.15■□□□□ 0.02
ATXN3-201ENST00000340660 C11orf16Q9NQ32 467 aa15.15■□□□□ 0.02
ATXN3-201ENST00000340660 MAP3K15Q6ZN16 1313 aa15.15■□□□□ 0.02
ATXN3-201ENST00000340660 PRKCZQ05513 592 aa15.14■□□□□ 0.01
ATXN3-201ENST00000340660 DDX46Q7L014 1031 aaKnown RBP15.14■□□□□ 0.01
ATXN3-201ENST00000340660 APOBEC3FQ8IUX4 373 aaKnown RBP15.14■□□□□ 0.01
ATXN3-201ENST00000340660 PXYLP1Q8TE99 480 aa15.14■□□□□ 0.01
ATXN3-201ENST00000340660 THEGQ9P2T0 379 aa15.14■□□□□ 0.01
ATXN3-201ENST00000340660 XIRP2A4UGR9 3374 aa15.14■□□□□ 0.01
ATXN3-201ENST00000340660 ADGRA2Q96PE1 1338 aa15.14■□□□□ 0.01
ATXN3-201ENST00000340660 ANKRD36CQ5JPF3 1778 aa15.13■□□□□ 0.01
ATXN3-201ENST00000340660 PSME4Q14997 1843 aa15.13■□□□□ 0.01
ATXN3-201ENST00000340660 PPP1R12BO60237 982 aaPredicted RBP15.13■□□□□ 0.01
ATXN3-201ENST00000340660 FECHP22830 423 aa15.13■□□□□ 0.01
ATXN3-201ENST00000340660 HOXD10P28358 340 aa15.13■□□□□ 0.01
ATXN3-201ENST00000340660 TTLL7Q6ZT98 887 aa15.13■□□□□ 0.01
ATXN3-201ENST00000340660 TMC4Q7Z404 712 aa15.13■□□□□ 0.01
ATXN3-201ENST00000340660 TBC1D16Q8TBP0 767 aa15.13■□□□□ 0.01
ATXN3-201ENST00000340660 INHAP05111 366 aa15.12■□□□□ 0.01
ATXN3-201ENST00000340660 SNRPA1P09661 255 aaKnown RBP15.12■□□□□ 0.01
ATXN3-201ENST00000340660 COPS2P61201 443 aa15.12■□□□□ 0.01
ATXN3-201ENST00000340660 MRPS5P82675 430 aaKnown RBP15.12■□□□□ 0.01
ATXN3-201ENST00000340660 NGEFQ8N5V2 710 aa15.12■□□□□ 0.01
ATXN3-201ENST00000340660 SIN3AQ96ST3 1273 aa15.12■□□□□ 0.01
ATXN3-201ENST00000340660 IRX2Q9BZI1 471 aaPredicted RBP15.12■□□□□ 0.01
ATXN3-201ENST00000340660 ELP3Q9H9T3 547 aa15.12■□□□□ 0.01
ATXN3-201ENST00000340660 COL3A1P02461 1466 aaPredicted RBP15.12■□□□□ 0.01
ATXN3-201ENST00000340660 COL4A1P02462 1669 aa15.12■□□□□ 0.01
ATXN3-201ENST00000340660 CFAP54Q96N23 3096 aa15.11■□□□□ 0.01
ATXN3-201ENST00000340660 USP2O75604 605 aaPredicted RBP15.11■□□□□ 0.01
ATXN3-201ENST00000340660 FMNL1O95466 1100 aaPredicted RBP15.11■□□□□ 0.01
ATXN3-201ENST00000340660 HCLS1P14317 486 aaPredicted RBP15.11■□□□□ 0.01
ATXN3-201ENST00000340660 C17orf99Q6UX52 265 aa15.11■□□□□ 0.01
ATXN3-201ENST00000340660 PPP1R42Q7Z4L9 355 aa15.11■□□□□ 0.01
ATXN3-201ENST00000340660 DEFB129Q9H1M3 183 aa15.11■□□□□ 0.01
ATXN3-201ENST00000340660 COL1A1P02452 1464 aaPredicted RBP15.11■□□□□ 0.01
ATXN3-201ENST00000340660 SLC24A1O60721 1099 aa15.1■□□□□ 0.01
ATXN3-201ENST00000340660 OATP04181 439 aa15.1■□□□□ 0.01
ATXN3-201ENST00000340660 HMOX1P09601 288 aa15.1■□□□□ 0.01
ATXN3-201ENST00000340660 FOXK2Q01167 660 aa15.1■□□□□ 0.01
ATXN3-201ENST00000340660 NHLH1Q02575 133 aa15.1■□□□□ 0.01
ATXN3-201ENST00000340660 ANKRD13AQ8IZ07 590 aa15.1■□□□□ 0.01
ATXN3-201ENST00000340660 ANKLE1Q8NAG6 615 aa15.1■□□□□ 0.01
ATXN3-201ENST00000340660 MXD3Q9BW11 206 aa15.1■□□□□ 0.01
ATXN3-201ENST00000340660 PRR14Q9BWN1 585 aa15.1■□□□□ 0.01
ATXN3-201ENST00000340660 ZC3H12CQ9C0D7 883 aaKnown RBP15.1■□□□□ 0.01
ATXN3-201ENST00000340660 ZBTB3Q9H5J0 574 aa15.1■□□□□ 0.01
ATXN3-201ENST00000340660 GABRQQ9UN88 632 aa15.1■□□□□ 0.01
ATXN3-201ENST00000340660 OTOFQ9HC10 1997 aa15.09■□□□□ 0.01
ATXN3-201ENST00000340660 FAM86C2PA6NEL3 165 aa15.09■□□□□ 0.01
ATXN3-201ENST00000340660 BTBD11A6QL63 1104 aa15.09■□□□□ 0.01
ATXN3-201ENST00000340660 ELNP15502 786 aa15.09■□□□□ 0.01
ATXN3-201ENST00000340660 IREB2P48200 963 aaKnown RBP15.09■□□□□ 0.01
ATXN3-201ENST00000340660 GTF2A2P52657 109 aa15.09■□□□□ 0.01
ATXN3-201ENST00000340660 GRIN2CQ14957 1233 aa15.09■□□□□ 0.01
ATXN3-201ENST00000340660 PPP1R18Q6NYC8 613 aa15.09■□□□□ 0.01
ATXN3-201ENST00000340660 METTL3Q86U44 580 aaKnown RBP15.09■□□□□ 0.01
ATXN3-201ENST00000340660 C11orf49Q9H6J7 331 aa15.09■□□□□ 0.01
ATXN3-201ENST00000340660 CPA4Q9UI42 421 aa15.09■□□□□ 0.01
ATXN3-201ENST00000340660 PKD1L2Q7Z442 2459 aa15.09■□□□□ 0.01
ATXN3-201ENST00000340660 WDFY4Q6ZS81 3184 aa15.09■□□□□ 0.01
ATXN3-201ENST00000340660 DDX60LQ5H9U9 1706 aaKnown RBP15.09■□□□□ 0.01
ATXN3-201ENST00000340660 USP34Q70CQ2 3546 aa15.08■□□□□ 0.01
ATXN3-201ENST00000340660 ADCY3O60266 1144 aa15.08■□□□□ 0
ATXN3-201ENST00000340660 GPR37L1O60883 481 aa15.08■□□□□ 0
ATXN3-201ENST00000340660 SMAD3P84022 425 aaKnown RBP15.08■□□□□ 0
ATXN3-201ENST00000340660 PODNQ7Z5L7 613 aa15.08■□□□□ 0
ATXN3-201ENST00000340660 HELBQ8NG08 1087 aaPredicted RBP15.08■□□□□ 0
ATXN3-201ENST00000340660 PPM1EQ8WY54 764 aa15.08■□□□□ 0
ATXN3-201ENST00000340660 CELF1Q92879 486 aaKnown RBP15.08■□□□□ 0
ATXN3-201ENST00000340660 UTP14AQ9BVJ6 771 aaKnown RBP15.08■□□□□ 0
ATXN3-201ENST00000340660 PFASO15067 1338 aa15.08■□□□□ 0
ATXN3-201ENST00000340660 USP17L3A6NCW0 530 aa15.07■□□□□ 0
ATXN3-201ENST00000340660 USP17L4A6NCW7 530 aa15.07■□□□□ 0
ATXN3-201ENST00000340660 BTBD19C9JJ37 291 aa15.07■□□□□ 0
ATXN3-201ENST00000340660 USP17L1Q7RTZ2 530 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 1722.4 ms