RNA–Protein interactions for RNA: ENST00000340612.4

CCDC30-201, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-201ENST00000340612 MICALL1Q8N3F8 863 aa3.1□□□□□ -1.91
CCDC30-201ENST00000340612 STK35Q8TDR2 534 aa3.1□□□□□ -1.91
CCDC30-201ENST00000340612 TP53INP1Q96A56 240 aa3.1□□□□□ -1.91
CCDC30-201ENST00000340612 SPON2Q9BUD6 331 aa3.1□□□□□ -1.91
CCDC30-201ENST00000340612 SEC31BQ9NQW1 1179 aa3.1□□□□□ -1.91
CCDC30-201ENST00000340612 PCMTD2Q9NV79 361 aa3.1□□□□□ -1.91
CCDC30-201ENST00000340612 LIG3P49916 1009 aa3.09□□□□□ -1.91
CCDC30-201ENST00000340612 ZNF423Q2M1K9 1284 aa3.09□□□□□ -1.91
CCDC30-201ENST00000340612 FBXL19Q6PCT2 694 aa3.09□□□□□ -1.91
CCDC30-201ENST00000340612 MPRIPQ6WCQ1 1025 aa3.09□□□□□ -1.91
CCDC30-201ENST00000340612 NECAB3Q96P71 396 aaPredicted RBP3.09□□□□□ -1.91
CCDC30-201ENST00000340612 NOC4LQ9BVI4 516 aaKnown RBP3.09□□□□□ -1.91
CCDC30-201ENST00000340612 KCNG1Q9UIX4 513 aa3.09□□□□□ -1.91
CCDC30-201ENST00000340612 RNF112Q9ULX5 631 aa3.09□□□□□ -1.91
CCDC30-201ENST00000340612 SMNDC1O75940 238 aaKnown RBP eCLIP3.09□□□□□ -1.91
CCDC30-201ENST00000340612 PF4P02776 101 aa3.09□□□□□ -1.91
CCDC30-201ENST00000340612 EPHA1P21709 976 aa3.09□□□□□ -1.91
CCDC30-201ENST00000340612 SSTR4P31391 388 aa3.09□□□□□ -1.91
CCDC30-201ENST00000340612 NRG1Q02297 640 aaPredicted RBP3.09□□□□□ -1.91
CCDC30-201ENST00000340612 TTBK2Q6IQ55 1244 aa3.09□□□□□ -1.91
CCDC30-201ENST00000340612 VN1R5Q7Z5H4 357 aa3.09□□□□□ -1.91
CCDC30-201ENST00000340612 RELL1Q8IUW5 271 aa3.09□□□□□ -1.91
CCDC30-201ENST00000340612 PHC3Q8NDX5 983 aa3.09□□□□□ -1.91
CCDC30-201ENST00000340612 TNFRSF25Q93038 417 aa3.09□□□□□ -1.91
CCDC30-201ENST00000340612 EAF1Q96JC9 268 aaPredicted RBP3.09□□□□□ -1.91
CCDC30-201ENST00000340612 TMEM74Q96NL1 305 aa3.09□□□□□ -1.91
CCDC30-201ENST00000340612 RBSNQ9H1K0 784 aa3.09□□□□□ -1.91
CCDC30-201ENST00000340612 EFCC1Q9HA90 598 aa3.09□□□□□ -1.91
CCDC30-201ENST00000340612 UBP1Q9NZI7 540 aa3.09□□□□□ -1.91
CCDC30-201ENST00000340612 PCDHB5Q9Y5E4 795 aa3.09□□□□□ -1.91
CCDC30-201ENST00000340612 OAS3Q9Y6K5 1087 aaKnown RBP3.09□□□□□ -1.91
CCDC30-201ENST00000340612 RIMBP3CA6NJZ7 1639 aa3.09□□□□□ -1.92
CCDC30-201ENST00000340612 RIMBP3BA6NNM3 1639 aa3.09□□□□□ -1.92
CCDC30-201ENST00000340612 RIMBP3Q9UFD9 1639 aa3.09□□□□□ -1.92
CCDC30-201ENST00000340612 TLR3O15455 904 aaKnown RBP3.08□□□□□ -1.92
CCDC30-201ENST00000340612 XRCC5P13010 732 aaKnown RBP3.08□□□□□ -1.92
CCDC30-201ENST00000340612 SELPP16109 830 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 EIF4A3P38919 411 aaKnown RBP3.08□□□□□ -1.92
CCDC30-201ENST00000340612 PCDH1Q08174 1060 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 ADGRE1Q14246 886 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 SF3A1Q15459 793 aaKnown RBP3.08□□□□□ -1.92
CCDC30-201ENST00000340612 PCNX4Q63HM2 1172 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 SHISA2Q6UWI4 295 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 KIAA0825Q8IV33 1275 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 GOLM1Q8NBJ4 401 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 FBXO27Q8NI29 283 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 GRIN3AQ8TCU5 1115 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 ZNF296Q8WUU4 475 aaPredicted RBP3.08□□□□□ -1.92
CCDC30-201ENST00000340612 BSNDQ8WZ55 320 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 GPRASP2Q96D09 838 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 RHOVQ96L33 236 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 ZC3H12CQ9C0D7 883 aaKnown RBP3.08□□□□□ -1.92
CCDC30-201ENST00000340612 PPM1HQ9ULR3 514 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 ALBP02768 609 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 TFE3P19532 575 aaPredicted RBP3.08□□□□□ -1.92
CCDC30-201ENST00000340612 CRKP46108 304 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 GJA8P48165 433 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 ARID5AQ03989 594 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 TRIM28Q13263 835 aaKnown RBP3.08□□□□□ -1.92
CCDC30-201ENST00000340612 GNL2Q13823 731 aaKnown RBP3.08□□□□□ -1.92
CCDC30-201ENST00000340612 SEPT6Q14141 434 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 BNC2Q6ZN30 1099 aaPredicted RBP3.08□□□□□ -1.92
CCDC30-201ENST00000340612 MCF2L2Q86YR7 1114 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 FTSJ3Q8IY81 847 aaKnown RBP3.08□□□□□ -1.92
CCDC30-201ENST00000340612 SLC7A3Q8WY07 619 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 JARID2Q92833 1246 aaPredicted RBP3.08□□□□□ -1.92
CCDC30-201ENST00000340612 MDFIQ99750 246 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 RSRP1Q9BUV0 290 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 CLEC4MQ9H2X3 399 aaPredicted RBP3.08□□□□□ -1.92
CCDC30-201ENST00000340612 SOX13Q9UN79 622 aa3.08□□□□□ -1.92
CCDC30-201ENST00000340612 SPDYE3A6NKU9 549 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 PTPRAP18433 802 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 ATP2B1P20020 1258 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 GARTP22102 1010 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 SNAP47Q5SQN1 464 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 SV2BQ7L1I2 683 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 PMFBP1Q8TBY8 1022 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 UBXN4Q92575 508 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.07□□□□□ -1.92
CCDC30-201ENST00000340612 CARD10Q9BWT7 1032 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 CBX8Q9HC52 389 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 JPH1Q9HDC5 661 aaPredicted RBP3.07□□□□□ -1.92
CCDC30-201ENST00000340612 STARD13Q9Y3M8 1113 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 MRVI1Q9Y6F6 885 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 ELOA3CA0A087WX78 387 aaPredicted RBP3.07□□□□□ -1.92
CCDC30-201ENST00000340612 ELOA3DA6NLF2 546 aaPredicted RBP3.07□□□□□ -1.92
CCDC30-201ENST00000340612 M0R082 166 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 RGS9O75916 674 aaPredicted RBP3.07□□□□□ -1.92
CCDC30-201ENST00000340612 CLSTN1O94985 981 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 ECEL1O95672 775 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 FGRP09769 529 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 ESRRAP11474 423 aaPredicted RBP3.07□□□□□ -1.92
CCDC30-201ENST00000340612 ATF4P18848 351 aaPredicted RBP3.07□□□□□ -1.92
CCDC30-201ENST00000340612 NASPP49321 788 aaPredicted RBP3.07□□□□□ -1.92
CCDC30-201ENST00000340612 CAMK2GQ13555 558 aaPredicted RBP3.07□□□□□ -1.92
CCDC30-201ENST00000340612 ELOA3BQ3SY89 546 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 CCDC81Q6ZN84 652 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 SLC43A3Q8NBI5 491 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 ELOA3Q8NG57 546 aa3.07□□□□□ -1.92
CCDC30-201ENST00000340612 ZNF417Q8TAU3 575 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms