RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 TBC1D9BQ66K14 1250 aa21.82■■□□□ 1.08
PSPC1-201ENST00000338910 C11orf57Q6ZUT1 292 aaPredicted RBP21.82■■□□□ 1.08
PSPC1-201ENST00000338910 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.82■■□□□ 1.08
PSPC1-201ENST00000338910 QTRT2Q9H974 415 aaKnown RBP21.82■■□□□ 1.08
PSPC1-201ENST00000338910 PIH1D3Q9NQM4 214 aaKnown RBP21.82■■□□□ 1.08
PSPC1-201ENST00000338910 FGAP02671 866 aa21.81■■□□□ 1.08
PSPC1-201ENST00000338910 ELF2Q15723 593 aa21.81■■□□□ 1.08
PSPC1-201ENST00000338910 GTF3C6Q969F1 213 aa21.81■■□□□ 1.08
PSPC1-201ENST00000338910 ZNF512BQ96KM6 892 aaPredicted RBP21.81■■□□□ 1.08
PSPC1-201ENST00000338910 KCND1Q9NSA2 647 aa21.81■■□□□ 1.08
PSPC1-201ENST00000338910 JAK2O60674 1132 aa21.81■■□□□ 1.08
PSPC1-201ENST00000338910 FGFR2P21802 821 aa21.81■■□□□ 1.08
PSPC1-201ENST00000338910 ABCC12Q96J65 1359 aa21.81■■□□□ 1.08
PSPC1-201ENST00000338910 EXOSC10Q01780 885 aaKnown RBP21.8■■□□□ 1.08
PSPC1-201ENST00000338910 RESTQ13127 1097 aa21.8■■□□□ 1.08
PSPC1-201ENST00000338910 NARFQ9UHQ1 456 aa21.8■■□□□ 1.08
PSPC1-201ENST00000338910 CCDC69A6NI79 296 aa21.8■■□□□ 1.08
PSPC1-201ENST00000338910 GPAA1O43292 621 aa21.8■■□□□ 1.08
PSPC1-201ENST00000338910 APOBRQ0VD83 1088 aa21.8■■□□□ 1.08
PSPC1-201ENST00000338910 CCAR2Q8N163 923 aaKnown RBP21.8■■□□□ 1.08
PSPC1-201ENST00000338910 RTCBQ9Y3I0 505 aaKnown RBP21.8■■□□□ 1.08
PSPC1-201ENST00000338910 TTF1Q15361 905 aaPredicted RBP21.79■■□□□ 1.08
PSPC1-201ENST00000338910 C3orf67Q6ZVT6 689 aa21.79■■□□□ 1.08
PSPC1-201ENST00000338910 LRP5O75197 1615 aa21.79■■□□□ 1.08
PSPC1-201ENST00000338910 SLU7O95391 586 aaKnown RBP21.79■■□□□ 1.08
PSPC1-201ENST00000338910 SLC5A1P13866 664 aa21.79■■□□□ 1.08
PSPC1-201ENST00000338910 ADD2P35612 726 aa21.79■■□□□ 1.08
PSPC1-201ENST00000338910 IGHMBP2P38935 993 aaKnown RBP21.79■■□□□ 1.08
PSPC1-201ENST00000338910 FAM193AP78312 1265 aa21.79■■□□□ 1.08
PSPC1-201ENST00000338910 SCRN1Q12765 414 aa21.79■■□□□ 1.08
PSPC1-201ENST00000338910 NAP1L2Q9ULW6 460 aaPredicted RBP21.79■■□□□ 1.08
PSPC1-201ENST00000338910 SBF2Q86WG5 1849 aa21.79■■□□□ 1.08
PSPC1-201ENST00000338910 ZPR1O75312 459 aa21.78■■□□□ 1.08
PSPC1-201ENST00000338910 UQCRFS1P1P0C7P4 283 aa21.78■■□□□ 1.08
PSPC1-201ENST00000338910 ARID4AP29374 1257 aaPredicted RBP21.78■■□□□ 1.08
PSPC1-201ENST00000338910 STX1AQ16623 288 aa21.78■■□□□ 1.08
PSPC1-201ENST00000338910 IMMTQ16891 758 aaKnown RBP21.78■■□□□ 1.08
PSPC1-201ENST00000338910 DDX11Q96FC9 970 aa21.78■■□□□ 1.08
PSPC1-201ENST00000338910 ARHGEF1Q92888 912 aaKnown RBP21.78■■□□□ 1.08
PSPC1-201ENST00000338910 ZNF446Q9NWS9 450 aa21.78■■□□□ 1.08
PSPC1-201ENST00000338910 TRMT1Q9NXH9 659 aaKnown RBP21.78■■□□□ 1.08
PSPC1-201ENST00000338910 RTL9Q8NET4 1388 aa21.77■■□□□ 1.08
PSPC1-201ENST00000338910 AKAP11Q9UKA4 1901 aa21.77■■□□□ 1.08
PSPC1-201ENST00000338910 ZBTB22O15209 634 aa21.77■■□□□ 1.08
PSPC1-201ENST00000338910 KIF2AO00139 706 aaPredicted RBP21.76■■□□□ 1.07
PSPC1-201ENST00000338910 CTAGE5O15320 804 aa21.76■■□□□ 1.07
PSPC1-201ENST00000338910 CCT2P78371 535 aaKnown RBP21.76■■□□□ 1.07
PSPC1-201ENST00000338910 FILIP1Q7Z7B0 1213 aa21.76■■□□□ 1.07
PSPC1-201ENST00000338910 CREBRFQ8IUR6 639 aa21.76■■□□□ 1.07
PSPC1-201ENST00000338910 SPATA5Q8NB90 893 aa21.76■■□□□ 1.07
PSPC1-201ENST00000338910 SETDB2Q96T68 719 aa21.76■■□□□ 1.07
PSPC1-201ENST00000338910 WWC3Q9ULE0 1092 aa21.76■■□□□ 1.07
PSPC1-201ENST00000338910 ZNF532Q9HCE3 1301 aa21.76■■□□□ 1.07
PSPC1-201ENST00000338910 DHX40Q8IX18 779 aaKnown RBP21.76■■□□□ 1.07
PSPC1-201ENST00000338910 ST7Q9NRC1 585 aa21.76■■□□□ 1.07
PSPC1-201ENST00000338910 LAMB2P55268 1798 aa21.75■■□□□ 1.07
PSPC1-201ENST00000338910 COL4A1P02462 1669 aa21.75■■□□□ 1.07
PSPC1-201ENST00000338910 PFKFB2O60825 505 aa21.75■■□□□ 1.07
PSPC1-201ENST00000338910 BCAMP50895 628 aa21.75■■□□□ 1.07
PSPC1-201ENST00000338910 RASGRF1Q13972 1273 aa21.75■■□□□ 1.07
PSPC1-201ENST00000338910 GPHNQ9NQX3 736 aaPredicted RBP21.75■■□□□ 1.07
PSPC1-201ENST00000338910 LRRC4BQ9NT99 713 aa21.75■■□□□ 1.07
PSPC1-201ENST00000338910 CFAP45Q9UL16 551 aa21.75■■□□□ 1.07
PSPC1-201ENST00000338910 SCN7AQ01118 1682 aa21.75■■□□□ 1.07
PSPC1-201ENST00000338910 APPP05067 770 aa21.75■■□□□ 1.07
PSPC1-201ENST00000338910 H2AFXP16104 143 aaPredicted RBP21.75■■□□□ 1.07
PSPC1-201ENST00000338910 PDE6AP16499 860 aa21.75■■□□□ 1.07
PSPC1-201ENST00000338910 TIGD1Q96MW7 591 aa21.75■■□□□ 1.07
PSPC1-201ENST00000338910 AGXT2Q9BYV1 514 aa21.75■■□□□ 1.07
PSPC1-201ENST00000338910 ZSCAN16Q9H4T2 348 aaPredicted RBP21.75■■□□□ 1.07
PSPC1-201ENST00000338910 LY75O60449 1722 aa21.74■■□□□ 1.07
PSPC1-201ENST00000338910 BECN2A8MW95 431 aa21.74■■□□□ 1.07
PSPC1-201ENST00000338910 ZNF213O14771 459 aa21.74■■□□□ 1.07
PSPC1-201ENST00000338910 PPFIA3O75145 1194 aa21.74■■□□□ 1.07
PSPC1-201ENST00000338910 IRX5P78411 483 aaPredicted RBP21.74■■□□□ 1.07
PSPC1-201ENST00000338910 CHRNDQ07001 517 aa21.74■■□□□ 1.07
PSPC1-201ENST00000338910 UBE3CQ15386 1083 aa21.74■■□□□ 1.07
PSPC1-201ENST00000338910 CCDC24Q8N4L8 307 aa21.74■■□□□ 1.07
PSPC1-201ENST00000338910 L2HGDHQ9H9P8 463 aa21.74■■□□□ 1.07
PSPC1-201ENST00000338910 NCOA5Q9HCD5 579 aaKnown RBP21.74■■□□□ 1.07
PSPC1-201ENST00000338910 LAMA4Q16363 1823 aa21.74■■□□□ 1.07
PSPC1-201ENST00000338910 RGL2O15211 777 aa21.74■■□□□ 1.07
PSPC1-201ENST00000338910 CDC5LQ99459 802 aaKnown RBP21.74■■□□□ 1.07
PSPC1-201ENST00000338910 TAF1LQ8IZX4 1826 aa21.73■■□□□ 1.07
PSPC1-201ENST00000338910 SF3B3Q15393 1217 aaKnown RBP21.73■■□□□ 1.07
PSPC1-201ENST00000338910 FAM196AQ6ZSG2 479 aa21.73■■□□□ 1.07
PSPC1-201ENST00000338910 NBPF5PQ86XG9 351 aaPredicted RBP21.73■■□□□ 1.07
PSPC1-201ENST00000338910 ADD1P35611 737 aaKnown RBP21.72■■□□□ 1.07
PSPC1-201ENST00000338910 TAF1P21675 1872 aa21.72■■□□□ 1.07
PSPC1-201ENST00000338910 PDIA3P30101 505 aaKnown RBP21.72■■□□□ 1.07
PSPC1-201ENST00000338910 GSDMDP57764 484 aa21.72■■□□□ 1.07
PSPC1-201ENST00000338910 CTDNEP1O95476 244 aa21.71■■□□□ 1.07
PSPC1-201ENST00000338910 RFC4P35249 363 aa21.71■■□□□ 1.07
PSPC1-201ENST00000338910 SNW1Q13573 536 aaKnown RBP21.71■■□□□ 1.07
PSPC1-201ENST00000338910 BMS1Q14692 1282 aaKnown RBP21.71■■□□□ 1.07
PSPC1-201ENST00000338910 TRAPPC3LQ5T215 181 aa21.71■■□□□ 1.07
PSPC1-201ENST00000338910 ANKRD18AQ8IVF6 992 aa21.71■■□□□ 1.07
PSPC1-201ENST00000338910 CCAR1Q8IX12 1150 aaKnown RBP21.71■■□□□ 1.07
PSPC1-201ENST00000338910 OSBPL5Q9H0X9 879 aaPredicted RBP21.71■■□□□ 1.07
PSPC1-201ENST00000338910 GOLPH3LQ9H4A5 285 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 181.5 ms