RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 PRPF4BQ13523 1007 aaKnown RBP17.83■□□□□ 0.44
HDAC5-202ENST00000336057 KRT40Q6A162 431 aa17.83■□□□□ 0.44
HDAC5-202ENST00000336057 AEBP2Q6ZN18 517 aaPredicted RBP17.83■□□□□ 0.44
HDAC5-202ENST00000336057 MAATS1Q7Z4T9 603 aa17.83■□□□□ 0.44
HDAC5-202ENST00000336057 RASEFQ8IZ41 740 aa17.83■□□□□ 0.44
HDAC5-202ENST00000336057 MLH3Q9UHC1 1453 aa17.83■□□□□ 0.44
HDAC5-202ENST00000336057 CDC42BPAQ5VT25 1732 aa17.83■□□□□ 0.44
HDAC5-202ENST00000336057 GBP2P32456 591 aaPredicted RBP17.82■□□□□ 0.44
HDAC5-202ENST00000336057 IGSF1Q8N6C5 1336 aa17.82■□□□□ 0.44
HDAC5-202ENST00000336057 ZAP70P43403 619 aa17.82■□□□□ 0.44
HDAC5-202ENST00000336057 PUF60Q9UHX1 559 aaKnown RBP17.82■□□□□ 0.44
HDAC5-202ENST00000336057 ANKRD62A6NC57 917 aa17.82■□□□□ 0.44
HDAC5-202ENST00000336057 TPTE2Q6XPS3 522 aa17.82■□□□□ 0.44
HDAC5-202ENST00000336057 ZNF804AQ7Z570 1209 aa17.82■□□□□ 0.44
HDAC5-202ENST00000336057 HSF2BPO75031 334 aa17.82■□□□□ 0.44
HDAC5-202ENST00000336057 GNA11P29992 359 aa17.82■□□□□ 0.44
HDAC5-202ENST00000336057 RRP36Q96EU6 259 aaKnown RBP17.82■□□□□ 0.44
HDAC5-202ENST00000336057 ST5P78524 1137 aa17.81■□□□□ 0.44
HDAC5-202ENST00000336057 KRT79Q5XKE5 535 aa17.81■□□□□ 0.44
HDAC5-202ENST00000336057 MLKLQ8NB16 471 aa17.81■□□□□ 0.44
HDAC5-202ENST00000336057 ZNF274Q96GC6 653 aaPredicted RBP17.81■□□□□ 0.44
HDAC5-202ENST00000336057 POLR2DO15514 142 aaKnown RBP17.81■□□□□ 0.44
HDAC5-202ENST00000336057 TAOK3Q9H2K8 898 aa17.81■□□□□ 0.44
HDAC5-202ENST00000336057 DENND2AQ9ULE3 1009 aa17.81■□□□□ 0.44
HDAC5-202ENST00000336057 TET3O43151 1660 aa17.81■□□□□ 0.44
HDAC5-202ENST00000336057 CUL4AQ13619 759 aa17.81■□□□□ 0.44
HDAC5-202ENST00000336057 SYCP3Q8IZU3 236 aa17.81■□□□□ 0.44
HDAC5-202ENST00000336057 IGSF22Q8N9C0 903 aa17.81■□□□□ 0.44
HDAC5-202ENST00000336057 PHKBQ93100 1093 aa17.81■□□□□ 0.44
HDAC5-202ENST00000336057 ANKRD2Q9GZV1 360 aa17.81■□□□□ 0.44
HDAC5-202ENST00000336057 ADCY10Q96PN6 1610 aa17.81■□□□□ 0.44
HDAC5-202ENST00000336057 GSTTP1A0A1W2PQM5 241 aa17.8■□□□□ 0.44
HDAC5-202ENST00000336057 EVCP57679 992 aa17.8■□□□□ 0.44
HDAC5-202ENST00000336057 MAP2K1Q02750 393 aaPredicted RBP17.8■□□□□ 0.44
HDAC5-202ENST00000336057 PTCH1Q13635 1447 aa17.8■□□□□ 0.44
HDAC5-202ENST00000336057 TUBBP07437 444 aa17.8■□□□□ 0.44
HDAC5-202ENST00000336057 RNF187Q5TA31 235 aaPredicted RBP17.8■□□□□ 0.44
HDAC5-202ENST00000336057 ADALQ6DHV7 355 aa17.8■□□□□ 0.44
HDAC5-202ENST00000336057 TTC6Q86TZ1 520 aa17.8■□□□□ 0.44
HDAC5-202ENST00000336057 LPIN2Q92539 896 aa17.8■□□□□ 0.44
HDAC5-202ENST00000336057 MAP4K1Q92918 833 aa17.8■□□□□ 0.44
HDAC5-202ENST00000336057 GCOM1H8Y6P7 765 aaPredicted RBP17.8■□□□□ 0.44
HDAC5-202ENST00000336057 NR1I2O75469 434 aa17.8■□□□□ 0.44
HDAC5-202ENST00000336057 MYZAPP0CAP1 466 aa17.8■□□□□ 0.44
HDAC5-202ENST00000336057 PARP10Q53GL7 1025 aa17.8■□□□□ 0.44
HDAC5-202ENST00000336057 PFKFB2O60825 505 aa17.8■□□□□ 0.44
HDAC5-202ENST00000336057 ZRSR2Q15696 482 aaKnown RBP17.79■□□□□ 0.44
HDAC5-202ENST00000336057 MYSM1Q5VVJ2 828 aa17.79■□□□□ 0.44
HDAC5-202ENST00000336057 SEC62Q99442 399 aaKnown RBP17.79■□□□□ 0.44
HDAC5-202ENST00000336057 MYL10Q9BUA6 226 aa17.79■□□□□ 0.44
HDAC5-202ENST00000336057 V9GY48 417 aaPredicted RBP17.79■□□□□ 0.44
HDAC5-202ENST00000336057 CDK12Q9NYV4 1490 aaPredicted RBP17.79■□□□□ 0.44
HDAC5-202ENST00000336057 CCDC172P0C7W6 258 aa17.79■□□□□ 0.44
HDAC5-202ENST00000336057 PLCG2P16885 1265 aa17.79■□□□□ 0.44
HDAC5-202ENST00000336057 CCT6AP40227 531 aaKnown RBP17.79■□□□□ 0.44
HDAC5-202ENST00000336057 HAUS7Q99871 368 aa17.79■□□□□ 0.44
HDAC5-202ENST00000336057 DESP17661 470 aa17.79■□□□□ 0.44
HDAC5-202ENST00000336057 MAPK8IP2Q13387 824 aaPredicted RBP17.79■□□□□ 0.44
HDAC5-202ENST00000336057 ADCK5Q3MIX3 580 aa17.79■□□□□ 0.44
HDAC5-202ENST00000336057 LDHBP07195 334 aaKnown RBP17.79■□□□□ 0.44
HDAC5-202ENST00000336057 USP28Q96RU2 1077 aa17.79■□□□□ 0.44
HDAC5-202ENST00000336057 PLIN2Q99541 437 aa17.79■□□□□ 0.44
HDAC5-202ENST00000336057 ZNF532Q9HCE3 1301 aa17.78■□□□□ 0.44
HDAC5-202ENST00000336057 CTNNBL1Q8WYA6 563 aaPredicted RBP17.78■□□□□ 0.44
HDAC5-202ENST00000336057 EFCAB6Q5THR3 1501 aa17.78■□□□□ 0.44
HDAC5-202ENST00000336057 RHOXF2BP0C7M4 288 aa17.78■□□□□ 0.44
HDAC5-202ENST00000336057 SF3B2Q13435 895 aaKnown RBP17.78■□□□□ 0.44
HDAC5-202ENST00000336057 RHOXF2Q9BQY4 288 aa17.78■□□□□ 0.44
HDAC5-202ENST00000336057 ZNF219Q9P2Y4 722 aaPredicted RBP17.78■□□□□ 0.44
HDAC5-202ENST00000336057 PICALMQ13492 652 aa17.78■□□□□ 0.44
HDAC5-202ENST00000336057 NFE2L3Q9Y4A8 694 aa17.78■□□□□ 0.44
HDAC5-202ENST00000336057 IGSF3O75054 1194 aa17.78■□□□□ 0.44
HDAC5-202ENST00000336057 IVLP07476 585 aa17.78■□□□□ 0.44
HDAC5-202ENST00000336057 CAPZA3Q96KX2 299 aa17.78■□□□□ 0.44
HDAC5-202ENST00000336057 PHF23Q9BUL5 403 aaPredicted RBP17.78■□□□□ 0.44
HDAC5-202ENST00000336057 MAP3K4Q9Y6R4 1608 aa17.77■□□□□ 0.44
HDAC5-202ENST00000336057 PHKG2P15735 406 aa17.77■□□□□ 0.44
HDAC5-202ENST00000336057 TNNI2P48788 182 aa17.77■□□□□ 0.44
HDAC5-202ENST00000336057 PPP2R3AQ06190 1150 aa17.77■□□□□ 0.44
HDAC5-202ENST00000336057 PPP2R5BQ15173 497 aa17.77■□□□□ 0.44
HDAC5-202ENST00000336057 COPRSQ9NQ92 184 aa17.77■□□□□ 0.44
HDAC5-202ENST00000336057 CTNND2Q9UQB3 1225 aa17.77■□□□□ 0.44
HDAC5-202ENST00000336057 DNAJC10Q8IXB1 793 aa17.77■□□□□ 0.44
HDAC5-202ENST00000336057 SMAP1Q8IYB5 467 aaPredicted RBP17.77■□□□□ 0.44
HDAC5-202ENST00000336057 CNKSR2Q8WXI2 1034 aa17.77■□□□□ 0.44
HDAC5-202ENST00000336057 ARHGAP6O43182 974 aa17.77■□□□□ 0.44
HDAC5-202ENST00000336057 HSPD1P10809 573 aaKnown RBP17.77■□□□□ 0.44
HDAC5-202ENST00000336057 CTDSPL2Q05D32 466 aa17.77■□□□□ 0.44
HDAC5-202ENST00000336057 KIAA1468Q9P260 1216 aa17.77■□□□□ 0.44
HDAC5-202ENST00000336057 USP6P35125 1406 aa17.77■□□□□ 0.43
HDAC5-202ENST00000336057 MACROD2A1Z1Q3 448 aa17.77■□□□□ 0.43
HDAC5-202ENST00000336057 F8W031 263 aaPredicted RBP17.77■□□□□ 0.43
HDAC5-202ENST00000336057 PLCD1P51178 756 aa17.77■□□□□ 0.43
HDAC5-202ENST00000336057 PPP4R3AQ6IN85 833 aa17.77■□□□□ 0.43
HDAC5-202ENST00000336057 NEK11Q8NG66 645 aa17.77■□□□□ 0.43
HDAC5-202ENST00000336057 U2AF2P26368 475 aaKnown RBP eCLIP17.76■□□□□ 0.432e-13■■■□□ 19.1
HDAC5-202ENST00000336057 TRAF1Q13077 416 aa17.76■□□□□ 0.43
HDAC5-202ENST00000336057 TCIRG1Q13488 830 aa17.76■□□□□ 0.43
HDAC5-202ENST00000336057 SPATA5Q8NB90 893 aa17.76■□□□□ 0.43
HDAC5-202ENST00000336057 BTG4Q9NY30 223 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms