RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 NBPF9Q3BBW0 867 aa21.1■□□□□ 0.97
CHGA-202ENST00000334654 MIGA1Q8NAN2 632 aa21.1■□□□□ 0.97
CHGA-202ENST00000334654 ADARB2Q9NS39 739 aaKnown RBP21.1■□□□□ 0.97
CHGA-202ENST00000334654 CDK5RAP2Q96SN8 1893 aa21.1■□□□□ 0.97
CHGA-202ENST00000334654 RBM5P52756 815 aaKnown RBP eCLIP21.09■□□□□ 0.97
CHGA-202ENST00000334654 KIF4BQ2VIQ3 1234 aa21.09■□□□□ 0.97
CHGA-202ENST00000334654 RBM26Q5T8P6 1007 aaKnown RBP21.09■□□□□ 0.97
CHGA-202ENST00000334654 CWC27Q6UX04 472 aaKnown RBP21.09■□□□□ 0.97
CHGA-202ENST00000334654 TAF1DQ9H5J8 278 aaPredicted RBP21.09■□□□□ 0.97
CHGA-202ENST00000334654 HELLSQ9NRZ9 838 aa21.09■□□□□ 0.97
CHGA-202ENST00000334654 AATFQ9NY61 560 aaKnown RBP eCLIP21.09■□□□□ 0.97
CHGA-202ENST00000334654 CDC45O75419 566 aa21.08■□□□□ 0.97
CHGA-202ENST00000334654 EPHX2P34913 555 aa21.08■□□□□ 0.97
CHGA-202ENST00000334654 CDC42EP5Q6NZY7 148 aa21.08■□□□□ 0.97
CHGA-202ENST00000334654 RRAGCQ9HB90 399 aa21.08■□□□□ 0.97
CHGA-202ENST00000334654 DIAPH3Q9NSV4 1193 aa21.08■□□□□ 0.97
CHGA-202ENST00000334654 MAGEB6P1A0A0J9YX57 407 aa21.07■□□□□ 0.96
CHGA-202ENST00000334654 MCMDC2Q4G0Z9 681 aa21.07■□□□□ 0.96
CHGA-202ENST00000334654 ZNF589Q86UQ0 364 aaPredicted RBP21.07■□□□□ 0.96
CHGA-202ENST00000334654 LCORLQ8N3X6 602 aa21.07■□□□□ 0.96
CHGA-202ENST00000334654 TDRD3Q9H7E2 651 aaKnown RBP21.07■□□□□ 0.96
CHGA-202ENST00000334654 NMRK2Q9NPI5 230 aa21.07■□□□□ 0.96
CHGA-202ENST00000334654 POLR2AP24928 1970 aaKnown RBP21.07■□□□□ 0.96
CHGA-202ENST00000334654 ASTN2O75129 1339 aaPredicted RBP21.07■□□□□ 0.96
CHGA-202ENST00000334654 IQCA1LA6NCM1 817 aa21.07■□□□□ 0.96
CHGA-202ENST00000334654 MBD4O95243 580 aa21.07■□□□□ 0.96
CHGA-202ENST00000334654 CCDC129Q6ZRS4 1044 aa21.07■□□□□ 0.96
CHGA-202ENST00000334654 SH3RF3Q8TEJ3 882 aaPredicted RBP21.07■□□□□ 0.96
CHGA-202ENST00000334654 STRBPQ96SI9 672 aaKnown RBP21.07■□□□□ 0.96
CHGA-202ENST00000334654 ARMT1Q9H993 441 aa21.07■□□□□ 0.96
CHGA-202ENST00000334654 FOCADQ5VW36 1801 aa21.06■□□□□ 0.96
CHGA-202ENST00000334654 GPAA1O43292 621 aa21.06■□□□□ 0.96
CHGA-202ENST00000334654 BAG3O95817 575 aa21.06■□□□□ 0.96
CHGA-202ENST00000334654 VEGFAP15692 232 aaPredicted RBP21.06■□□□□ 0.96
CHGA-202ENST00000334654 ZNF526Q8TF50 670 aaPredicted RBP21.06■□□□□ 0.96
CHGA-202ENST00000334654 USP40Q9NVE5 1235 aa21.06■□□□□ 0.96
CHGA-202ENST00000334654 FOXP2O15409 715 aa21.05■□□□□ 0.96
CHGA-202ENST00000334654 SGSM2O43147 1006 aa21.05■□□□□ 0.96
CHGA-202ENST00000334654 SPDYE2Q495Y8 402 aa21.05■□□□□ 0.96
CHGA-202ENST00000334654 USP50Q70EL3 339 aaPredicted RBP21.05■□□□□ 0.96
CHGA-202ENST00000334654 ESYT1Q9BSJ8 1104 aa21.05■□□□□ 0.96
CHGA-202ENST00000334654 ZNF70Q9UC06 446 aaPredicted RBP21.05■□□□□ 0.96
CHGA-202ENST00000334654 PRKAB2O43741 272 aa21.04■□□□□ 0.96
CHGA-202ENST00000334654 WDHD1O75717 1129 aaPredicted RBP21.04■□□□□ 0.96
CHGA-202ENST00000334654 AIDAQ96BJ3 306 aa21.04■□□□□ 0.96
CHGA-202ENST00000334654 CLRN2A0PK11 232 aa21.03■□□□□ 0.96
CHGA-202ENST00000334654 CACNB3P54284 484 aa21.03■□□□□ 0.96
CHGA-202ENST00000334654 NOL10Q9BSC4 688 aaKnown RBP21.03■□□□□ 0.96
CHGA-202ENST00000334654 PGAP2Q9UHJ9 254 aa21.03■□□□□ 0.96
CHGA-202ENST00000334654 RAD50Q92878 1312 aa21.03■□□□□ 0.96
CHGA-202ENST00000334654 PLCG2P16885 1265 aa21.02■□□□□ 0.96
CHGA-202ENST00000334654 NFIAQ12857 509 aa21.02■□□□□ 0.96
CHGA-202ENST00000334654 C8orf34Q49A92 452 aa21.02■□□□□ 0.96
CHGA-202ENST00000334654 CERS3Q8IU89 383 aa21.02■□□□□ 0.96
CHGA-202ENST00000334654 RUFY2Q8WXA3 655 aa21.02■□□□□ 0.96
CHGA-202ENST00000334654 IDI2Q9BXS1 227 aa21.02■□□□□ 0.96
CHGA-202ENST00000334654 DDX4Q9NQI0 724 aaKnown RBP21.02■□□□□ 0.96
CHGA-202ENST00000334654 MKRN1Q9UHC7 482 aaKnown RBP21.02■□□□□ 0.96
CHGA-202ENST00000334654 CCDC171Q6TFL3 1326 aa21.02■□□□□ 0.96
CHGA-202ENST00000334654 POTEIP0CG38 1075 aa21.01■□□□□ 0.95
CHGA-202ENST00000334654 POTEJP0CG39 1038 aa21.01■□□□□ 0.95
CHGA-202ENST00000334654 VPS53Q5VIR6 699 aa21.01■□□□□ 0.95
CHGA-202ENST00000334654 TEX11Q8IYF3 940 aa21.01■□□□□ 0.95
CHGA-202ENST00000334654 FAM198AQ9UFP1 575 aa21.01■□□□□ 0.95
CHGA-202ENST00000334654 GSG1L2A8MUP6 293 aa21.01■□□□□ 0.95
CHGA-202ENST00000334654 PNMA8AQ86V59 439 aaPredicted RBP21.01■□□□□ 0.95
CHGA-202ENST00000334654 TGFBRAP1Q8WUH2 860 aa21.01■□□□□ 0.95
CHGA-202ENST00000334654 SDR42E1Q8WUS8 393 aa21.01■□□□□ 0.95
CHGA-202ENST00000334654 BAZ2AQ9UIF9 1905 aaKnown RBP21■□□□□ 0.95
CHGA-202ENST00000334654 ANGEL2Q5VTE6 544 aaKnown RBP21■□□□□ 0.95
CHGA-202ENST00000334654 FKBP1CQ5VVH2 108 aa21■□□□□ 0.95
CHGA-202ENST00000334654 ZC3H15Q8WU90 426 aaKnown RBP21■□□□□ 0.95
CHGA-202ENST00000334654 CRNKL1Q9BZJ0 848 aaKnown RBP21■□□□□ 0.95
CHGA-202ENST00000334654 GGA3Q9NZ52 723 aa21■□□□□ 0.95
CHGA-202ENST00000334654 SCAF8Q9UPN6 1271 aaKnown RBP21■□□□□ 0.95
CHGA-202ENST00000334654 SLC4A4Q9Y6R1 1079 aa21■□□□□ 0.95
CHGA-202ENST00000334654 CNTNAP1P78357 1384 aa20.99■□□□□ 0.95
CHGA-202ENST00000334654 PATL2C9JE40 543 aaKnown RBP20.99■□□□□ 0.95
CHGA-202ENST00000334654 MYO1BO43795 1136 aa20.99■□□□□ 0.95
CHGA-202ENST00000334654 NPM3O75607 178 aaKnown RBP20.99■□□□□ 0.95
CHGA-202ENST00000334654 HSPD1P10809 573 aaKnown RBP20.99■□□□□ 0.95
CHGA-202ENST00000334654 YY1P25490 414 aa20.99■□□□□ 0.95
CHGA-202ENST00000334654 EAPPQ56P03 285 aaPredicted RBP20.99■□□□□ 0.95
CHGA-202ENST00000334654 CASC1Q6TDU7 716 aa20.99■□□□□ 0.95
CHGA-202ENST00000334654 ZFPM1Q8IX07 1006 aa20.99■□□□□ 0.95
CHGA-202ENST00000334654 EPB41L4AQ9HCS5 686 aaPredicted RBP20.99■□□□□ 0.95
CHGA-202ENST00000334654 MYH1P12882 1939 aa20.98■□□□□ 0.95
CHGA-202ENST00000334654 DDX60LQ5H9U9 1706 aaKnown RBP20.98■□□□□ 0.95
CHGA-202ENST00000334654 TCP10L2B9ZVM9 353 aa20.98■□□□□ 0.95
CHGA-202ENST00000334654 GNAT2P19087 354 aa20.98■□□□□ 0.95
CHGA-202ENST00000334654 PTH1RQ03431 593 aa20.98■□□□□ 0.95
CHGA-202ENST00000334654 VEZTQ9HBM0 779 aa20.98■□□□□ 0.95
CHGA-202ENST00000334654 GPBP1L1Q9HC44 474 aaPredicted RBP20.98■□□□□ 0.95
CHGA-202ENST00000334654 DCP1AQ9NPI6 582 aaPredicted RBP20.98■□□□□ 0.95
CHGA-202ENST00000334654 PITPNM2Q9BZ72 1349 aa20.98■□□□□ 0.95
CHGA-202ENST00000334654 MFAP1P55081 439 aaKnown RBP20.97■□□□□ 0.95
CHGA-202ENST00000334654 MAPKAPK5Q8IW41 473 aa20.97■□□□□ 0.95
CHGA-202ENST00000334654 LSG1Q9H089 658 aaKnown RBP20.97■□□□□ 0.95
CHGA-202ENST00000334654 ATP8A2Q9NTI2 1148 aa20.97■□□□□ 0.95
CHGA-202ENST00000334654 FLT1P17948 1338 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms