RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 LCORLQ8N3X6 602 aa22.5■■□□□ 1.19
TSSC4-201ENST00000333256 HACL1Q9UJ83 578 aa22.5■■□□□ 1.19
TSSC4-201ENST00000333256 ZNF589Q86UQ0 364 aaPredicted RBP22.49■■□□□ 1.19
TSSC4-201ENST00000333256 AIDAQ96BJ3 306 aa22.49■■□□□ 1.19
TSSC4-201ENST00000333256 RIOK1Q9BRS2 568 aaKnown RBP22.49■■□□□ 1.19
TSSC4-201ENST00000333256 NOL10Q9BSC4 688 aaKnown RBP22.49■■□□□ 1.19
TSSC4-201ENST00000333256 TDRD3Q9H7E2 651 aaKnown RBP22.49■■□□□ 1.19
TSSC4-201ENST00000333256 ASTN2O75129 1339 aaPredicted RBP22.49■■□□□ 1.19
TSSC4-201ENST00000333256 WNT10BO00744 389 aa22.49■■□□□ 1.19
TSSC4-201ENST00000333256 MCMDC2Q4G0Z9 681 aa22.49■■□□□ 1.19
TSSC4-201ENST00000333256 TICAM2Q86XR7 235 aa22.49■■□□□ 1.19
TSSC4-201ENST00000333256 SH3RF3Q8TEJ3 882 aaPredicted RBP22.49■■□□□ 1.19
TSSC4-201ENST00000333256 HELLSQ9NRZ9 838 aa22.49■■□□□ 1.19
TSSC4-201ENST00000333256 CLRN2A0PK11 232 aa22.48■■□□□ 1.19
TSSC4-201ENST00000333256 GPAA1O43292 621 aa22.48■■□□□ 1.19
TSSC4-201ENST00000333256 BAG3O95817 575 aa22.48■■□□□ 1.19
TSSC4-201ENST00000333256 HIRAP54198 1017 aaPredicted RBP22.48■■□□□ 1.19
TSSC4-201ENST00000333256 CACNB3P54284 484 aa22.48■■□□□ 1.19
TSSC4-201ENST00000333256 CDC42EP5Q6NZY7 148 aa22.48■■□□□ 1.19
TSSC4-201ENST00000333256 TMED8Q6PL24 325 aaPredicted RBP22.48■■□□□ 1.19
TSSC4-201ENST00000333256 RRAGCQ9HB90 399 aa22.48■■□□□ 1.19
TSSC4-201ENST00000333256 ADARB2Q9NS39 739 aaKnown RBP22.48■■□□□ 1.19
TSSC4-201ENST00000333256 USP40Q9NVE5 1235 aa22.48■■□□□ 1.19
TSSC4-201ENST00000333256 EPHX2P34913 555 aa22.47■■□□□ 1.19
TSSC4-201ENST00000333256 RHBDL3P58872 404 aa22.47■■□□□ 1.19
TSSC4-201ENST00000333256 CASC1Q6TDU7 716 aa22.47■■□□□ 1.19
TSSC4-201ENST00000333256 MTMR14Q8NCE2 650 aa22.47■■□□□ 1.19
TSSC4-201ENST00000333256 ZBED3Q96IU2 234 aaPredicted RBP22.47■■□□□ 1.19
TSSC4-201ENST00000333256 NMRK2Q9NPI5 230 aa22.47■■□□□ 1.19
TSSC4-201ENST00000333256 PRKAB2O43741 272 aa22.46■■□□□ 1.19
TSSC4-201ENST00000333256 ESYT1Q9BSJ8 1104 aa22.46■■□□□ 1.19
TSSC4-201ENST00000333256 IQCA1LA6NCM1 817 aa22.46■■□□□ 1.19
TSSC4-201ENST00000333256 MMP14P50281 582 aa22.46■■□□□ 1.19
TSSC4-201ENST00000333256 PPP4CP60510 307 aa22.46■■□□□ 1.19
TSSC4-201ENST00000333256 RUFY2Q8WXA3 655 aa22.46■■□□□ 1.19
TSSC4-201ENST00000333256 STRBPQ96SI9 672 aaKnown RBP22.46■■□□□ 1.19
TSSC4-201ENST00000333256 TAF1DQ9H5J8 278 aaPredicted RBP22.46■■□□□ 1.19
TSSC4-201ENST00000333256 SCAF8Q9UPN6 1271 aaKnown RBP22.46■■□□□ 1.19
TSSC4-201ENST00000333256 WDR90Q96KV7 1748 aa22.45■■□□□ 1.19
TSSC4-201ENST00000333256 SGSM2O43147 1006 aa22.45■■□□□ 1.18
TSSC4-201ENST00000333256 VPS53Q5VIR6 699 aa22.45■■□□□ 1.18
TSSC4-201ENST00000333256 CCDC171Q6TFL3 1326 aa22.44■■□□□ 1.18
TSSC4-201ENST00000333256 C8orf34Q49A92 452 aa22.44■■□□□ 1.18
TSSC4-201ENST00000333256 EAPPQ56P03 285 aaPredicted RBP22.44■■□□□ 1.18
TSSC4-201ENST00000333256 TEX11Q8IYF3 940 aa22.44■■□□□ 1.18
TSSC4-201ENST00000333256 SDR42E1Q8WUS8 393 aa22.44■■□□□ 1.18
TSSC4-201ENST00000333256 NFIAQ12857 509 aa22.43■■□□□ 1.18
TSSC4-201ENST00000333256 VEZTQ9HBM0 779 aa22.43■■□□□ 1.18
TSSC4-201ENST00000333256 ZNF70Q9UC06 446 aaPredicted RBP22.43■■□□□ 1.18
TSSC4-201ENST00000333256 SLC4A4Q9Y6R1 1079 aa22.43■■□□□ 1.18
TSSC4-201ENST00000333256 MYO1BO43795 1136 aa22.42■■□□□ 1.18
TSSC4-201ENST00000333256 VEGFAP15692 232 aaPredicted RBP22.42■■□□□ 1.18
TSSC4-201ENST00000333256 PICALMQ13492 652 aa22.42■■□□□ 1.18
TSSC4-201ENST00000333256 TGFBRAP1Q8WUH2 860 aa22.42■■□□□ 1.18
TSSC4-201ENST00000333256 CRNKL1Q9BZJ0 848 aaKnown RBP22.42■■□□□ 1.18
TSSC4-201ENST00000333256 RAD50Q92878 1312 aa22.42■■□□□ 1.18
TSSC4-201ENST00000333256 WDHD1O75717 1129 aaPredicted RBP22.42■■□□□ 1.18
TSSC4-201ENST00000333256 PLCG2P16885 1265 aa22.42■■□□□ 1.18
TSSC4-201ENST00000333256 SPDYE2Q495Y8 402 aa22.42■■□□□ 1.18
TSSC4-201ENST00000333256 TCP10L2B9ZVM9 353 aa22.41■■□□□ 1.18
TSSC4-201ENST00000333256 FOXP2O15409 715 aa22.41■■□□□ 1.18
TSSC4-201ENST00000333256 APPP05067 770 aa22.41■■□□□ 1.18
TSSC4-201ENST00000333256 POTEIP0CG38 1075 aa22.41■■□□□ 1.18
TSSC4-201ENST00000333256 POTEJP0CG39 1038 aa22.41■■□□□ 1.18
TSSC4-201ENST00000333256 ANGEL2Q5VTE6 544 aaKnown RBP22.41■■□□□ 1.18
TSSC4-201ENST00000333256 USP50Q70EL3 339 aaPredicted RBP22.41■■□□□ 1.18
TSSC4-201ENST00000333256 MAPKAPK5Q8IW41 473 aa22.41■■□□□ 1.18
TSSC4-201ENST00000333256 DDX4Q9NQI0 724 aaKnown RBP22.41■■□□□ 1.18
TSSC4-201ENST00000333256 GGA3Q9NZ52 723 aa22.41■■□□□ 1.18
TSSC4-201ENST00000333256 USP5P45974 858 aa22.4■■□□□ 1.18
TSSC4-201ENST00000333256 TCP10Q12799 353 aa22.4■■□□□ 1.18
TSSC4-201ENST00000333256 ANO2Q9NQ90 1003 aa22.4■■□□□ 1.18
TSSC4-201ENST00000333256 TMOD2Q9NZR1 351 aa22.4■■□□□ 1.18
TSSC4-201ENST00000333256 SCN4AP35499 1836 aa22.4■■□□□ 1.18
TSSC4-201ENST00000333256 YY1P25490 414 aa22.39■■□□□ 1.18
TSSC4-201ENST00000333256 MFAP1P55081 439 aaKnown RBP22.39■■□□□ 1.18
TSSC4-201ENST00000333256 PTH1RQ03431 593 aa22.39■■□□□ 1.18
TSSC4-201ENST00000333256 GSG1L2A8MUP6 293 aa22.39■■□□□ 1.17
TSSC4-201ENST00000333256 SEC24BO95487 1268 aa22.39■■□□□ 1.17
TSSC4-201ENST00000333256 HSPD1P10809 573 aaKnown RBP22.39■■□□□ 1.17
TSSC4-201ENST00000333256 SLC4A8Q2Y0W8 1093 aa22.39■■□□□ 1.17
TSSC4-201ENST00000333256 CERS3Q8IU89 383 aa22.39■■□□□ 1.17
TSSC4-201ENST00000333256 GPBP1L1Q9HC44 474 aaPredicted RBP22.39■■□□□ 1.17
TSSC4-201ENST00000333256 EPB41L4AQ9HCS5 686 aaPredicted RBP22.39■■□□□ 1.17
TSSC4-201ENST00000333256 FAM198AQ9UFP1 575 aa22.39■■□□□ 1.17
TSSC4-201ENST00000333256 PNMA8AQ86V59 439 aaPredicted RBP22.38■■□□□ 1.17
TSSC4-201ENST00000333256 ZFPM1Q8IX07 1006 aa22.38■■□□□ 1.17
TSSC4-201ENST00000333256 FLT1P17948 1338 aa22.38■■□□□ 1.17
TSSC4-201ENST00000333256 PATL2C9JE40 543 aaKnown RBP22.37■■□□□ 1.17
TSSC4-201ENST00000333256 GNAT2P19087 354 aa22.37■■□□□ 1.17
TSSC4-201ENST00000333256 KIAA1211Q6ZU35 1233 aa22.37■■□□□ 1.17
TSSC4-201ENST00000333256 IDI2Q9BXS1 227 aa22.37■■□□□ 1.17
TSSC4-201ENST00000333256 DCP1AQ9NPI6 582 aaPredicted RBP22.37■■□□□ 1.17
TSSC4-201ENST00000333256 SAP30BPQ9UHR5 308 aaKnown RBP22.37■■□□□ 1.17
TSSC4-201ENST00000333256 CLEC11AQ9Y240 323 aa22.37■■□□□ 1.17
TSSC4-201ENST00000333256 LSG1Q9H089 658 aaKnown RBP22.36■■□□□ 1.17
TSSC4-201ENST00000333256 IFNL3Q8IZI9 196 aa22.36■■□□□ 1.17
TSSC4-201ENST00000333256 CNTNAP1P78357 1384 aa22.35■■□□□ 1.17
TSSC4-201ENST00000333256 TDO2P48775 406 aa22.35■■□□□ 1.17
TSSC4-201ENST00000333256 DLK2Q6UY11 383 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms