RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 CALM3P0DP25 149 aa10.94□□□□□ -0.66
SS18L1-201ENST00000331758 UVSSAQ2YD98 709 aa10.94□□□□□ -0.66
SS18L1-201ENST00000331758 MSL1Q68DK7 614 aa10.94□□□□□ -0.66
SS18L1-201ENST00000331758 SMARCE1Q969G3 411 aa10.94□□□□□ -0.66
SS18L1-201ENST00000331758 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.94□□□□□ -0.66
SS18L1-201ENST00000331758 FOXO4P98177 505 aa10.94□□□□□ -0.66
SS18L1-201ENST00000331758 UBE3CQ15386 1083 aa10.94□□□□□ -0.66
SS18L1-201ENST00000331758 MAPKAPK5Q8IW41 473 aa10.94□□□□□ -0.66
SS18L1-201ENST00000331758 KIF2CQ99661 725 aa10.94□□□□□ -0.66
SS18L1-201ENST00000331758 CABP5Q9NP86 173 aa10.94□□□□□ -0.66
SS18L1-201ENST00000331758 CMTR1Q8N1G2 835 aaKnown RBP10.93□□□□□ -0.66
SS18L1-201ENST00000331758 TANGO6Q9C0B7 1094 aa10.93□□□□□ -0.66
SS18L1-201ENST00000331758 HS1BP3Q53T59 392 aa10.93□□□□□ -0.66
SS18L1-201ENST00000331758 FAM47AQ5JRC9 791 aa10.93□□□□□ -0.66
SS18L1-201ENST00000331758 TCP11L1Q9NUJ3 509 aa10.93□□□□□ -0.66
SS18L1-201ENST00000331758 NAPAP54920 295 aa10.93□□□□□ -0.66
SS18L1-201ENST00000331758 UBE4AQ14139 1066 aa10.93□□□□□ -0.66
SS18L1-201ENST00000331758 DIS3L2Q8IYB7 885 aaKnown RBP10.93□□□□□ -0.66
SS18L1-201ENST00000331758 SEPT12Q8IYM1 358 aa10.93□□□□□ -0.66
SS18L1-201ENST00000331758 OGFOD1Q8N543 542 aa10.93□□□□□ -0.66
SS18L1-201ENST00000331758 MCAMP43121 646 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 EIF6P56537 245 aaKnown RBP10.92□□□□□ -0.66
SS18L1-201ENST00000331758 PPARAQ07869 468 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 SCRN1Q12765 414 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 KRT40Q6A162 431 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 TGFBRAP1Q8WUH2 860 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 ZNF274Q96GC6 653 aaPredicted RBP10.92□□□□□ -0.66
SS18L1-201ENST00000331758 FEZ1Q99689 392 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 MST1RQ04912 1400 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 IDEP14735 1019 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 ADD2P35612 726 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 CCDC178Q5BJE1 867 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 DPP8Q6V1X1 898 aaPredicted RBP10.92□□□□□ -0.66
SS18L1-201ENST00000331758 LUZP1Q86V48 1076 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 AOPEPQ8N6M6 819 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 EYA3Q99504 573 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 PFKFB2O60825 505 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 CHGBP05060 677 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 PDIA3P30101 505 aaKnown RBP10.92□□□□□ -0.66
SS18L1-201ENST00000331758 RASGRF1Q13972 1273 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 RABL6Q3YEC7 729 aaPredicted RBP10.92□□□□□ -0.66
SS18L1-201ENST00000331758 TTC12Q9H892 705 aaPredicted RBP10.92□□□□□ -0.66
SS18L1-201ENST00000331758 KCNJ14Q9UNX9 436 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 PRKAB2O43741 272 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 CAVIN2O95810 425 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 GTF2IP78347 998 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 MFSD14BQ5SR56 506 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 DHX58Q96C10 678 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 CEP89Q96ST8 783 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 PDCL3Q9H2J4 239 aa10.92□□□□□ -0.66
SS18L1-201ENST00000331758 PIH1D3Q9NQM4 214 aaKnown RBP10.92□□□□□ -0.66
SS18L1-201ENST00000331758 ZNF804BA4D1E1 1349 aa10.91□□□□□ -0.66
SS18L1-201ENST00000331758 UQCRHLA0A096LP55 91 aa10.91□□□□□ -0.66
SS18L1-201ENST00000331758 UQCRHP07919 91 aa10.91□□□□□ -0.66
SS18L1-201ENST00000331758 TOP1P11387 765 aaKnown RBP10.91□□□□□ -0.66
SS18L1-201ENST00000331758 ANO1Q5XXA6 986 aa10.91□□□□□ -0.66
SS18L1-201ENST00000331758 TMC6Q7Z403 805 aa10.91□□□□□ -0.66
SS18L1-201ENST00000331758 CPLX3Q8WVH0 158 aa10.91□□□□□ -0.66
SS18L1-201ENST00000331758 RAB34Q9BZG1 259 aa10.91□□□□□ -0.66
SS18L1-201ENST00000331758 DEXIO95424 95 aa10.91□□□□□ -0.66
SS18L1-201ENST00000331758 LMOD1P29536 600 aaPredicted RBP10.91□□□□□ -0.66
SS18L1-201ENST00000331758 KRT2P35908 639 aa10.91□□□□□ -0.66
SS18L1-201ENST00000331758 TRIM28Q13263 835 aaKnown RBP10.91□□□□□ -0.66
SS18L1-201ENST00000331758 TMEM266Q2M3C6 531 aa10.91□□□□□ -0.66
SS18L1-201ENST00000331758 CCDC148Q8NFR7 591 aa10.91□□□□□ -0.66
SS18L1-201ENST00000331758 GPHNQ9NQX3 736 aaPredicted RBP10.91□□□□□ -0.66
SS18L1-201ENST00000331758 TRMT1Q9NXH9 659 aaKnown RBP10.91□□□□□ -0.66
SS18L1-201ENST00000331758 TFAP4Q01664 338 aa10.91□□□□□ -0.66
SS18L1-201ENST00000331758 TTC6Q86TZ1 520 aa10.91□□□□□ -0.66
SS18L1-201ENST00000331758 GPT2Q8TD30 523 aa10.91□□□□□ -0.66
SS18L1-201ENST00000331758 MEGF6O75095 1541 aa10.91□□□□□ -0.66
SS18L1-201ENST00000331758 MCM7P33993 719 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 ZNF445P59923 1031 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 SPECC1Q5M775 1068 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 TRMT1LQ7Z2T5 733 aaKnown RBP10.9□□□□□ -0.66
SS18L1-201ENST00000331758 ATG9AQ7Z3C6 839 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 CCDC186Q7Z3E2 898 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 GAS2L3Q86XJ1 694 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 VEZTQ9HBM0 779 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 ZNHIT6Q9NWK9 470 aaKnown RBP10.9□□□□□ -0.66
SS18L1-201ENST00000331758 EIF5P55010 431 aaKnown RBP10.9□□□□□ -0.66
SS18L1-201ENST00000331758 FAM160A1Q05DH4 1040 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 ZNF654Q8IZM8 581 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 MARCH10Q8NA82 808 aaPredicted RBP10.9□□□□□ -0.66
SS18L1-201ENST00000331758 CCDC112Q8NEF3 446 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 USP28Q96RU2 1077 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 PXDNQ92626 1479 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 IFT172Q9UG01 1749 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 ADGRB2O60241 1585 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 CALML3P27482 149 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 SCARF1Q14162 830 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 ZNF174Q15697 407 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 ATL3Q6DD88 541 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 ERCC4Q92889 916 aaPredicted RBP10.9□□□□□ -0.66
SS18L1-201ENST00000331758 KAZALD1Q96I82 304 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 IL25Q9H293 177 aa10.9□□□□□ -0.66
SS18L1-201ENST00000331758 BMP15O95972 392 aa10.9□□□□□ -0.67
SS18L1-201ENST00000331758 LIG1P18858 919 aa10.9□□□□□ -0.67
SS18L1-201ENST00000331758 DYNLL1P63167 89 aaKnown RBP10.9□□□□□ -0.67
SS18L1-201ENST00000331758 KANK3Q6NY19 840 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms