RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 OSBP2Q969R2 916 aa11.33□□□□□ -0.6
C11orf54-201ENST00000331239 STRBPQ96SI9 672 aaKnown RBP11.33□□□□□ -0.6
C11orf54-201ENST00000331239 NACAP1Q9BZK3 213 aa11.33□□□□□ -0.6
C11orf54-201ENST00000331239 ATP8A2Q9NTI2 1148 aa11.33□□□□□ -0.6
C11orf54-201ENST00000331239 FOCADQ5VW36 1801 aa11.33□□□□□ -0.6
C11orf54-201ENST00000331239 A0A0D9SFI3 127 aa11.33□□□□□ -0.6
C11orf54-201ENST00000331239 PATL2C9JE40 543 aaKnown RBP11.33□□□□□ -0.6
C11orf54-201ENST00000331239 PSMD14O00487 310 aa11.33□□□□□ -0.6
C11orf54-201ENST00000331239 PRDX5P30044 214 aa11.33□□□□□ -0.6
C11orf54-201ENST00000331239 TSGA10IPQ3SY00 556 aa11.33□□□□□ -0.6
C11orf54-201ENST00000331239 CERS5Q8N5B7 392 aa11.33□□□□□ -0.6
C11orf54-201ENST00000331239 RIOK1Q9BRS2 568 aaKnown RBP11.33□□□□□ -0.6
C11orf54-201ENST00000331239 USP26Q9BXU7 913 aa11.33□□□□□ -0.6
C11orf54-201ENST00000331239 CRNKL1Q9BZJ0 848 aaKnown RBP11.33□□□□□ -0.6
C11orf54-201ENST00000331239 TTF2Q9UNY4 1162 aaKnown RBP11.33□□□□□ -0.6
C11orf54-201ENST00000331239 COL2A1P02458 1487 aaPredicted RBP11.32□□□□□ -0.6
C11orf54-201ENST00000331239 PCP11498 1178 aaKnown RBP11.32□□□□□ -0.6
C11orf54-201ENST00000331239 RNF20Q5VTR2 975 aa11.32□□□□□ -0.6
C11orf54-201ENST00000331239 FAM227BQ96M60 508 aa11.32□□□□□ -0.6
C11orf54-201ENST00000331239 LSG1Q9H089 658 aaKnown RBP11.32□□□□□ -0.6
C11orf54-201ENST00000331239 NDUFB9Q9Y6M9 179 aa11.32□□□□□ -0.6
C11orf54-201ENST00000331239 ECM29Q5VYK3 1845 aa11.32□□□□□ -0.6
C11orf54-201ENST00000331239 GPAA1O43292 621 aa11.32□□□□□ -0.6
C11orf54-201ENST00000331239 USP17L8P0C7I0 530 aa11.32□□□□□ -0.6
C11orf54-201ENST00000331239 MCM4P33991 863 aa11.32□□□□□ -0.6
C11orf54-201ENST00000331239 RASSF7Q02833 373 aa11.32□□□□□ -0.6
C11orf54-201ENST00000331239 DPY19L2Q6NUT2 758 aa11.31□□□□□ -0.6
C11orf54-201ENST00000331239 ZNF384Q8TF68 577 aa11.31□□□□□ -0.6
C11orf54-201ENST00000331239 ZBED3Q96IU2 234 aaPredicted RBP11.31□□□□□ -0.6
C11orf54-201ENST00000331239 PUS7LQ9H0K6 701 aaKnown RBP11.31□□□□□ -0.6
C11orf54-201ENST00000331239 CRKP46108 304 aa11.31□□□□□ -0.6
C11orf54-201ENST00000331239 L3MBTL3Q96JM7 780 aaPredicted RBP11.31□□□□□ -0.6
C11orf54-201ENST00000331239 HSPD1P10809 573 aaKnown RBP11.3□□□□□ -0.6
C11orf54-201ENST00000331239 PRELPP51888 382 aa11.3□□□□□ -0.6
C11orf54-201ENST00000331239 KRT32Q14532 448 aa11.3□□□□□ -0.6
C11orf54-201ENST00000331239 SBK1Q52WX2 424 aa11.3□□□□□ -0.6
C11orf54-201ENST00000331239 DAGLAQ9Y4D2 1042 aa11.3□□□□□ -0.6
C11orf54-201ENST00000331239 SCN4AP35499 1836 aa11.3□□□□□ -0.6
C11orf54-201ENST00000331239 LAMA4Q16363 1823 aa11.3□□□□□ -0.6
C11orf54-201ENST00000331239 M0R2C6 588 aa11.3□□□□□ -0.6
C11orf54-201ENST00000331239 HSPA4P34932 840 aa11.3□□□□□ -0.6
C11orf54-201ENST00000331239 C9orf131Q5VYM1 1079 aa11.3□□□□□ -0.6
C11orf54-201ENST00000331239 IDI2Q9BXS1 227 aa11.3□□□□□ -0.6
C11orf54-201ENST00000331239 RNF181Q9P0P0 153 aa11.3□□□□□ -0.6
C11orf54-201ENST00000331239 RAD17O75943 681 aa11.29□□□□□ -0.6
C11orf54-201ENST00000331239 MBD4O95243 580 aa11.29□□□□□ -0.6
C11orf54-201ENST00000331239 FBXW7Q969H0 707 aa11.29□□□□□ -0.6
C11orf54-201ENST00000331239 KIF2CQ99661 725 aa11.29□□□□□ -0.6
C11orf54-201ENST00000331239 ANO2Q9NQ90 1003 aa11.29□□□□□ -0.6
C11orf54-201ENST00000331239 KCNQ5Q9NR82 932 aa11.29□□□□□ -0.6
C11orf54-201ENST00000331239 ANAPC4Q9UJX5 808 aa11.29□□□□□ -0.6
C11orf54-201ENST00000331239 CDK5RAP2Q96SN8 1893 aa11.29□□□□□ -0.6
C11orf54-201ENST00000331239 ZKSCAN1P17029 563 aaPredicted RBP11.29□□□□□ -0.6
C11orf54-201ENST00000331239 DDIT3P35638 169 aa11.29□□□□□ -0.6
C11orf54-201ENST00000331239 NECTIN1Q15223 517 aa11.29□□□□□ -0.6
C11orf54-201ENST00000331239 APOBEC3HQ6NTF7 200 aaKnown RBP11.29□□□□□ -0.6
C11orf54-201ENST00000331239 AMOTL1Q8IY63 956 aa11.29□□□□□ -0.6
C11orf54-201ENST00000331239 TM6SF1Q9BZW5 370 aa11.29□□□□□ -0.6
C11orf54-201ENST00000331239 CIZ1Q9ULV3 898 aaPredicted RBP11.29□□□□□ -0.6
C11orf54-201ENST00000331239 H7C1D1 291 aa11.28□□□□□ -0.6
C11orf54-201ENST00000331239 MYO1BO43795 1136 aa11.28□□□□□ -0.6
C11orf54-201ENST00000331239 ENTPD3O75355 529 aa11.28□□□□□ -0.6
C11orf54-201ENST00000331239 BTDP43251 543 aa11.28□□□□□ -0.6
C11orf54-201ENST00000331239 RHBDL3P58872 404 aa11.28□□□□□ -0.6
C11orf54-201ENST00000331239 DLGAP5Q15398 846 aa11.28□□□□□ -0.6
C11orf54-201ENST00000331239 ZNF589Q86UQ0 364 aaPredicted RBP11.28□□□□□ -0.6
C11orf54-201ENST00000331239 MTA3Q9BTC8 594 aa11.28□□□□□ -0.6
C11orf54-201ENST00000331239 ARPP21Q9UBL0 812 aaPredicted RBP11.28□□□□□ -0.6
C11orf54-201ENST00000331239 WDR90Q96KV7 1748 aa11.28□□□□□ -0.6
C11orf54-201ENST00000331239 DDX11L8A8MPP1 907 aa11.28□□□□□ -0.6
C11orf54-201ENST00000331239 L1TD1Q5T7N2 865 aaKnown RBP11.28□□□□□ -0.6
C11orf54-201ENST00000331239 ADGRA1Q86SQ6 560 aa11.28□□□□□ -0.6
C11orf54-201ENST00000331239 DHX36Q9H2U1 1008 aaKnown RBP11.28□□□□□ -0.6
C11orf54-201ENST00000331239 MKRN1Q9UHC7 482 aaKnown RBP11.28□□□□□ -0.6
C11orf54-201ENST00000331239 SLC4A4Q9Y6R1 1079 aa11.28□□□□□ -0.6
C11orf54-201ENST00000331239 SPDYE2BA6NHP3 402 aa11.27□□□□□ -0.61
C11orf54-201ENST00000331239 GSG1L2A8MUP6 293 aa11.27□□□□□ -0.61
C11orf54-201ENST00000331239 SLC3A2P08195 630 aaKnown RBP11.27□□□□□ -0.61
C11orf54-201ENST00000331239 HMGB1P09429 215 aaKnown RBP11.27□□□□□ -0.61
C11orf54-201ENST00000331239 SPDYE6P0CI01 402 aa11.27□□□□□ -0.61
C11orf54-201ENST00000331239 GRIK5Q16478 980 aa11.27□□□□□ -0.61
C11orf54-201ENST00000331239 IMMTQ16891 758 aaKnown RBP11.27□□□□□ -0.61
C11orf54-201ENST00000331239 FAM83AQ86UY5 434 aa11.27□□□□□ -0.61
C11orf54-201ENST00000331239 KIAA0825Q8IV33 1275 aa11.27□□□□□ -0.61
C11orf54-201ENST00000331239 IFNL3Q8IZI9 196 aa11.27□□□□□ -0.61
C11orf54-201ENST00000331239 LCORLQ8N3X6 602 aa11.27□□□□□ -0.61
C11orf54-201ENST00000331239 GPRC5DQ9NZD1 345 aa11.27□□□□□ -0.61
C11orf54-201ENST00000331239 TMOD2Q9NZR1 351 aa11.27□□□□□ -0.61
C11orf54-201ENST00000331239 DDX60LQ5H9U9 1706 aaKnown RBP11.27□□□□□ -0.61
C11orf54-201ENST00000331239 GLTPD2A6NH11 291 aa11.27□□□□□ -0.61
C11orf54-201ENST00000331239 PSMA5P28066 241 aa11.27□□□□□ -0.61
C11orf54-201ENST00000331239 GMPSP49915 693 aaPredicted RBP11.27□□□□□ -0.61
C11orf54-201ENST00000331239 CFAP100Q494V2 611 aa11.27□□□□□ -0.61
C11orf54-201ENST00000331239 SEC62Q99442 399 aaKnown RBP11.27□□□□□ -0.61
C11orf54-201ENST00000331239 RNF41Q9H4P4 317 aaPredicted RBP11.27□□□□□ -0.61
C11orf54-201ENST00000331239 ZNF287Q9HBT7 754 aa11.27□□□□□ -0.61
C11orf54-201ENST00000331239 AATFQ9NY61 560 aaKnown RBP eCLIP11.27□□□□□ -0.61
C11orf54-201ENST00000331239 RBM8AQ9Y5S9 174 aaKnown RBP11.27□□□□□ -0.61
C11orf54-201ENST00000331239 WDR19Q8NEZ3 1342 aa11.26□□□□□ -0.61
C11orf54-201ENST00000331239 PITPNM2Q9BZ72 1349 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms