RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 TRDNQ13061 729 aa20.1■□□□□ 0.81
PTP4A3-201ENST00000329397 CGNQ9P2M7 1197 aaKnown RBP20.1■□□□□ 0.81
PTP4A3-201ENST00000329397 WWC3Q9ULE0 1092 aa20.1■□□□□ 0.81
PTP4A3-201ENST00000329397 RIC1Q4ADV7 1423 aa20.1■□□□□ 0.81
PTP4A3-201ENST00000329397 VGLL3A8MV65 326 aa20.1■□□□□ 0.81
PTP4A3-201ENST00000329397 CNNM1Q9NRU3 951 aa20.1■□□□□ 0.81
PTP4A3-201ENST00000329397 ATG3Q9NT62 314 aa20.1■□□□□ 0.81
PTP4A3-201ENST00000329397 ANGEL1Q9UNK9 670 aaKnown RBP20.1■□□□□ 0.81
PTP4A3-201ENST00000329397 GSDMDP57764 484 aa20.09■□□□□ 0.81
PTP4A3-201ENST00000329397 FBXL16Q8N461 479 aa20.09■□□□□ 0.81
PTP4A3-201ENST00000329397 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.09■□□□□ 0.81
PTP4A3-201ENST00000329397 TMEM232C9JQI7 657 aa20.09■□□□□ 0.81
PTP4A3-201ENST00000329397 CMA1P23946 247 aa20.09■□□□□ 0.81
PTP4A3-201ENST00000329397 PHKA1P46020 1223 aa20.09■□□□□ 0.81
PTP4A3-201ENST00000329397 MYH7P12883 1935 aa20.08■□□□□ 0.81
PTP4A3-201ENST00000329397 ADD2P35612 726 aa20.08■□□□□ 0.81
PTP4A3-201ENST00000329397 SLC39A14Q15043 492 aa20.08■□□□□ 0.81
PTP4A3-201ENST00000329397 LRRFIP1Q32MZ4 808 aaKnown RBP20.08■□□□□ 0.81
PTP4A3-201ENST00000329397 APOA5Q6Q788 366 aa20.08■□□□□ 0.81
PTP4A3-201ENST00000329397 NFXL1Q6ZNB6 911 aa20.08■□□□□ 0.81
PTP4A3-201ENST00000329397 CMTR1Q8N1G2 835 aaKnown RBP20.08■□□□□ 0.81
PTP4A3-201ENST00000329397 OGFRQ9NZT2 677 aa20.08■□□□□ 0.81
PTP4A3-201ENST00000329397 WDR17Q8IZU2 1322 aa20.08■□□□□ 0.81
PTP4A3-201ENST00000329397 ZNF532Q9HCE3 1301 aa20.08■□□□□ 0.81
PTP4A3-201ENST00000329397 ERVV-2B6SEH9 535 aa20.08■□□□□ 0.8
PTP4A3-201ENST00000329397 RANBP6O60518 1105 aaKnown RBP20.08■□□□□ 0.8
PTP4A3-201ENST00000329397 HSPA2P54652 639 aa20.08■□□□□ 0.8
PTP4A3-201ENST00000329397 ERCC6LQ2NKX8 1250 aa20.08■□□□□ 0.8
PTP4A3-201ENST00000329397 ST7Q9NRC1 585 aa20.08■□□□□ 0.8
PTP4A3-201ENST00000329397 DDX41Q9UJV9 622 aaKnown RBP20.08■□□□□ 0.8
PTP4A3-201ENST00000329397 AKAP11Q9UKA4 1901 aa20.08■□□□□ 0.8
PTP4A3-201ENST00000329397 C4AP0C0L4 1744 aa20.07■□□□□ 0.8
PTP4A3-201ENST00000329397 C4BP0C0L5 1744 aa20.07■□□□□ 0.8
PTP4A3-201ENST00000329397 CTDSPL2Q05D32 466 aa20.07■□□□□ 0.8
PTP4A3-201ENST00000329397 SYCP1Q15431 976 aa20.07■□□□□ 0.8
PTP4A3-201ENST00000329397 FEZ1Q99689 392 aa20.07■□□□□ 0.8
PTP4A3-201ENST00000329397 ZKSCAN3Q9BRR0 538 aa20.07■□□□□ 0.8
PTP4A3-201ENST00000329397 SPEF2Q9C093 1822 aa20.07■□□□□ 0.8
PTP4A3-201ENST00000329397 CPDO75976 1380 aa20.07■□□□□ 0.8
PTP4A3-201ENST00000329397 RIPOR2Q9Y4F9 1068 aa20.07■□□□□ 0.8
PTP4A3-201ENST00000329397 ZMYM6O95789 1325 aa20.07■□□□□ 0.8
PTP4A3-201ENST00000329397 SH2B2O14492 632 aaPredicted RBP20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 GRIN1Q05586 938 aa20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 UTP14CQ5TAP6 766 aaKnown RBP20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 HOMER1Q86YM7 354 aa20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 FAM177A1Q8N128 213 aaPredicted RBP20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 TMX1Q9H3N1 280 aa20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 UBR2Q8IWV8 1755 aa20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 SLU7O95391 586 aaKnown RBP20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 SERPINC1P01008 464 aa20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 CFAP100Q494V2 611 aa20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 LONRF3Q496Y0 759 aa20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 KIF6Q6ZMV9 814 aa20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 FOXP4Q8IVH2 680 aaPredicted RBP20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 PCCAP05165 728 aaPredicted RBP20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 IL2RBP14784 551 aa20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 GUCY1A2P33402 732 aa20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 ZBTB38Q8NAP3 1195 aaPredicted RBP20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 TTLL11Q8NHH1 800 aa20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 SLC26A6Q9BXS9 759 aa20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 TMOD3Q9NYL9 352 aa20.06■□□□□ 0.8
PTP4A3-201ENST00000329397 ATP2B1P20020 1258 aa20.05■□□□□ 0.8
PTP4A3-201ENST00000329397 PTPAQ15257 358 aa20.05■□□□□ 0.8
PTP4A3-201ENST00000329397 RRP12Q5JTH9 1297 aaKnown RBP20.05■□□□□ 0.8
PTP4A3-201ENST00000329397 METTL16Q86W50 562 aaKnown RBP20.05■□□□□ 0.8
PTP4A3-201ENST00000329397 CNKSR2Q8WXI2 1034 aa20.05■□□□□ 0.8
PTP4A3-201ENST00000329397 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.05■□□□□ 0.8
PTP4A3-201ENST00000329397 TMEM51Q9NW97 253 aa20.05■□□□□ 0.8
PTP4A3-201ENST00000329397 IMPACTQ9P2X3 320 aa20.05■□□□□ 0.8
PTP4A3-201ENST00000329397 TACC3Q9Y6A5 838 aa20.05■□□□□ 0.8
PTP4A3-201ENST00000329397 UBASH3AP57075 661 aa20.05■□□□□ 0.8
PTP4A3-201ENST00000329397 PDE4BQ07343 736 aa20.05■□□□□ 0.8
PTP4A3-201ENST00000329397 ZNF827Q17R98 1081 aa20.05■□□□□ 0.8
PTP4A3-201ENST00000329397 BPIFA3Q9BQP9 254 aa20.05■□□□□ 0.8
PTP4A3-201ENST00000329397 FANCLQ9NW38 375 aa20.05■□□□□ 0.8
PTP4A3-201ENST00000329397 KCNJ14Q9UNX9 436 aa20.05■□□□□ 0.8
PTP4A3-201ENST00000329397 GOLGA8AA7E2F4 631 aa20.04■□□□□ 0.8
PTP4A3-201ENST00000329397 ZBTB43O43298 467 aa20.04■□□□□ 0.8
PTP4A3-201ENST00000329397 CSF1RP07333 972 aa20.04■□□□□ 0.8
PTP4A3-201ENST00000329397 PDE6AP16499 860 aa20.04■□□□□ 0.8
PTP4A3-201ENST00000329397 CCDC150Q8NCX0 1101 aa20.04■□□□□ 0.8
PTP4A3-201ENST00000329397 ZNF397Q8NF99 534 aaPredicted RBP20.04■□□□□ 0.8
PTP4A3-201ENST00000329397 ERO1AQ96HE7 468 aa20.04■□□□□ 0.8
PTP4A3-201ENST00000329397 TOMM22Q9NS69 142 aa20.04■□□□□ 0.8
PTP4A3-201ENST00000329397 UBN2Q6ZU65 1347 aa20.04■□□□□ 0.8
PTP4A3-201ENST00000329397 FANCGO15287 622 aa20.04■□□□□ 0.8
PTP4A3-201ENST00000329397 TPM4P67936 248 aa20.04■□□□□ 0.8
PTP4A3-201ENST00000329397 TMEM67Q5HYA8 995 aa20.04■□□□□ 0.8
PTP4A3-201ENST00000329397 CCDC102BQ68D86 513 aa20.04■□□□□ 0.8
PTP4A3-201ENST00000329397 CHMP4CQ96CF2 233 aa20.04■□□□□ 0.8
PTP4A3-201ENST00000329397 GTPBP4Q9BZE4 634 aaKnown RBP20.04■□□□□ 0.8
PTP4A3-201ENST00000329397 FAM217BQ9NTX9 383 aaPredicted RBP20.04■□□□□ 0.8
PTP4A3-201ENST00000329397 DNAI1Q9UI46 699 aa20.04■□□□□ 0.8
PTP4A3-201ENST00000329397 STRCP1A6NGW2 1772 aa20.04■□□□□ 0.8
PTP4A3-201ENST00000329397 IARSP41252 1262 aaKnown RBP20.03■□□□□ 0.8
PTP4A3-201ENST00000329397 GRAMD1CQ8IYS0 662 aa20.03■□□□□ 0.8
PTP4A3-201ENST00000329397 MAP3K14Q99558 947 aa20.03■□□□□ 0.8
PTP4A3-201ENST00000329397 BMP6P22004 513 aa20.03■□□□□ 0.8
PTP4A3-201ENST00000329397 UTP14AQ9BVJ6 771 aaKnown RBP20.03■□□□□ 0.8
PTP4A3-201ENST00000329397 EPB41L4AQ9HCS5 686 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms