RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 STX6O43752 255 aa9.93□□□□□ -0.82
PDLIM5-201ENST00000317968 IPO7O95373 1038 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-201ENST00000317968 HSPD1P10809 573 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-201ENST00000317968 IARSP41252 1262 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-201ENST00000317968 AK2P54819 239 aa9.93□□□□□ -0.82
PDLIM5-201ENST00000317968 GSE1Q14687 1217 aa9.93□□□□□ -0.82
PDLIM5-201ENST00000317968 RBM28Q9NW13 759 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-201ENST00000317968 MMP10P09238 476 aa9.92□□□□□ -0.82
PDLIM5-201ENST00000317968 METAP2P50579 478 aaKnown RBP eCLIP9.92□□□□□ -0.82
PDLIM5-201ENST00000317968 TNFAIP1Q13829 316 aa9.92□□□□□ -0.82
PDLIM5-201ENST00000317968 EAPPQ56P03 285 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-201ENST00000317968 ODF2Q5BJF6 829 aa9.92□□□□□ -0.82
PDLIM5-201ENST00000317968 RTKN2Q8IZC4 609 aa9.92□□□□□ -0.82
PDLIM5-201ENST00000317968 ZNF274Q96GC6 653 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-201ENST00000317968 C8orf76Q96K31 380 aa9.92□□□□□ -0.82
PDLIM5-201ENST00000317968 SLC4A9Q96Q91 983 aa9.92□□□□□ -0.82
PDLIM5-201ENST00000317968 TSPY2A6NKD2 308 aa9.92□□□□□ -0.82
PDLIM5-201ENST00000317968 TRAK2O60296 914 aa9.92□□□□□ -0.82
PDLIM5-201ENST00000317968 TLR7Q9NYK1 1049 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-201ENST00000317968 RANBP6O60518 1105 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-201ENST00000317968 FAM182BQ5T319 152 aa9.92□□□□□ -0.82
PDLIM5-201ENST00000317968 SSRP1Q08945 709 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-201ENST00000317968 BRDTQ58F21 947 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-201ENST00000317968 BICD2Q8TD16 824 aa9.92□□□□□ -0.82
PDLIM5-201ENST00000317968 ANGEL1Q9UNK9 670 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-201ENST00000317968 UBN2Q6ZU65 1347 aa9.92□□□□□ -0.82
PDLIM5-201ENST00000317968 ADORA1P30542 326 aa9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 Q6ZUG5 572 aa9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 SLC5A4Q9NY91 659 aa9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 MARF1Q9Y4F3 1742 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 AKNAD1Q5T1N1 836 aa9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 PRR5LQ6MZQ0 368 aa9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 DCPSQ96C86 337 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 KLF18A0A0U1RQI7 1052 aa9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 STK38Q15208 465 aa9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 KAT14Q9H8E8 782 aa9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 MMP14P50281 582 aa9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 RCAN1P53805 252 aa9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 NECTIN1Q15223 517 aa9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 PODNQ7Z5L7 613 aa9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 RDXP35241 583 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 BCAMP50895 628 aa9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 RAB3GAP1Q15042 981 aa9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 CT47A1Q5JQC4 288 aaPredicted RBP9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 STYK1Q6J9G0 422 aa9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 PNPLA7Q6ZV29 1317 aa9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 MYO3BQ8WXR4 1341 aa9.91□□□□□ -0.82
PDLIM5-201ENST00000317968 GOLGA6L19H0YKK7 550 aa9.9□□□□□ -0.82
PDLIM5-201ENST00000317968 TEX11Q8IYF3 940 aa9.9□□□□□ -0.82
PDLIM5-201ENST00000317968 PAF1Q8N7H5 531 aa9.9□□□□□ -0.82
PDLIM5-201ENST00000317968 LZTS2Q9BRK4 669 aa9.9□□□□□ -0.82
PDLIM5-201ENST00000317968 ZNF408Q9H9D4 720 aa9.9□□□□□ -0.82
PDLIM5-201ENST00000317968 ZSCAN22P10073 491 aaPredicted RBP9.9□□□□□ -0.82
PDLIM5-201ENST00000317968 MATR3P43243 847 aaKnown RBP eCLIP9.9□□□□□ -0.821e-6■■■□□ 17.1
PDLIM5-201ENST00000317968 CCDC93Q567U6 631 aa9.9□□□□□ -0.82
PDLIM5-201ENST00000317968 PYM1Q9BRP8 204 aaKnown RBP9.9□□□□□ -0.82
PDLIM5-201ENST00000317968 ADAMTS7Q9UKP4 1686 aa9.9□□□□□ -0.82
PDLIM5-201ENST00000317968 GRIN3BO60391 1043 aa9.9□□□□□ -0.82
PDLIM5-201ENST00000317968 PABPC4Q13310 644 aaKnown RBP eCLIP9.9□□□□□ -0.823e-8■□□□□ 9.8
PDLIM5-201ENST00000317968 SPON1Q9HCB6 807 aa9.9□□□□□ -0.82
PDLIM5-201ENST00000317968 ORC3Q9UBD5 711 aaPredicted RBP9.9□□□□□ -0.82
PDLIM5-201ENST00000317968 GJB2P29033 226 aa9.9□□□□□ -0.82
PDLIM5-201ENST00000317968 GYG1P46976 350 aa9.9□□□□□ -0.82
PDLIM5-201ENST00000317968 STK3Q13188 491 aa9.9□□□□□ -0.82
PDLIM5-201ENST00000317968 CUL4AQ13619 759 aa9.9□□□□□ -0.82
PDLIM5-201ENST00000317968 IFNL3Q8IZI9 196 aa9.9□□□□□ -0.82
PDLIM5-201ENST00000317968 CCDC148Q8NFR7 591 aa9.9□□□□□ -0.82
PDLIM5-201ENST00000317968 MCM9Q9NXL9 1143 aa9.9□□□□□ -0.82
PDLIM5-201ENST00000317968 HOXA10P31260 410 aaPredicted RBP9.9□□□□□ -0.83
PDLIM5-201ENST00000317968 RASGRF1Q13972 1273 aa9.9□□□□□ -0.83
PDLIM5-201ENST00000317968 RTN1Q16799 776 aa9.9□□□□□ -0.83
PDLIM5-201ENST00000317968 IQSEC3Q9UPP2 1182 aaPredicted RBP9.9□□□□□ -0.83
PDLIM5-201ENST00000317968 ZMYM6O95789 1325 aa9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 HAND2P61296 217 aa9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 TEKT1Q969V4 418 aa9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 BECN2A8MW95 431 aa9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 RIMBP2O15034 1052 aa9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 BAG4O95429 457 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 HSP90AA2PQ14568 343 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 SLC15A2Q16348 729 aa9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 RAB34Q9BZG1 259 aa9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 XIRP1Q702N8 1843 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 RGPD5Q99666 1765 aa9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 E7EWF7 191 aa9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 GYS1P13807 737 aa9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 MFSD14BQ5SR56 506 aa9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 IFIT1BQ5T764 474 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 BRAPQ7Z569 592 aa9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 MED23Q9ULK4 1368 aa9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 PPIP5K2O43314 1243 aa9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 KINO60870 393 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 MCAMP43121 646 aa9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 TNPO1Q92973 898 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 CALML3P27482 149 aa9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 RGS22Q8NE09 1264 aa9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 CELF1Q92879 486 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 GLT8D2Q9H1C3 349 aa9.89□□□□□ -0.83
PDLIM5-201ENST00000317968 CAVIN2O95810 425 aa9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 FGFR2P21802 821 aa9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 SYCP1Q15431 976 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms