RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 GNL3LQ9NVN8 582 aaKnown RBP17.18■□□□□ 0.34
HOXA3-201ENST00000317201 CYP46A1Q9Y6A2 500 aa17.18■□□□□ 0.34
HOXA3-201ENST00000317201 PDS5AQ29RF7 1337 aaKnown RBP17.18■□□□□ 0.34
HOXA3-201ENST00000317201 GRAPQ13588 217 aa17.17■□□□□ 0.34
HOXA3-201ENST00000317201 RUFY3Q7L099 469 aa17.17■□□□□ 0.34
HOXA3-201ENST00000317201 GRAPLQ8TC17 118 aaPredicted RBP17.17■□□□□ 0.34
HOXA3-201ENST00000317201 TMX3Q96JJ7 454 aa17.17■□□□□ 0.34
HOXA3-201ENST00000317201 TSPY26PQ9H489 355 aa17.17■□□□□ 0.34
HOXA3-201ENST00000317201 NRXN2Q9P2S2 1712 aa17.17■□□□□ 0.34
HOXA3-201ENST00000317201 SEMA3EO15041 775 aa17.17■□□□□ 0.34
HOXA3-201ENST00000317201 RASGRF1Q13972 1273 aa17.17■□□□□ 0.34
HOXA3-201ENST00000317201 NLGN1Q8N2Q7 840 aa17.17■□□□□ 0.34
HOXA3-201ENST00000317201 OSBP2Q969R2 916 aa17.17■□□□□ 0.34
HOXA3-201ENST00000317201 JAKMIP1Q96N16 626 aaKnown RBP17.17■□□□□ 0.34
HOXA3-201ENST00000317201 NOL10Q9BSC4 688 aaKnown RBP17.17■□□□□ 0.34
HOXA3-201ENST00000317201 UPF3BQ9BZI7 483 aaKnown RBP17.17■□□□□ 0.34
HOXA3-201ENST00000317201 KLRG2A4D1S0 409 aaPredicted RBP17.17■□□□□ 0.34
HOXA3-201ENST00000317201 CASTP20810 708 aaKnown RBP17.17■□□□□ 0.34
HOXA3-201ENST00000317201 CYP2C19P33261 490 aa17.17■□□□□ 0.34
HOXA3-201ENST00000317201 PI16Q6UXB8 463 aa17.17■□□□□ 0.34
HOXA3-201ENST00000317201 CCDC129Q6ZRS4 1044 aa17.17■□□□□ 0.34
HOXA3-201ENST00000317201 ZNF446Q9NWS9 450 aa17.17■□□□□ 0.34
HOXA3-201ENST00000317201 TFCP2L1Q9NZI6 479 aa17.17■□□□□ 0.34
HOXA3-201ENST00000317201 TAF1P21675 1872 aa17.17■□□□□ 0.34
HOXA3-201ENST00000317201 POLRMTO00411 1230 aaKnown RBP17.16■□□□□ 0.34
HOXA3-201ENST00000317201 IRF6O14896 467 aa17.16■□□□□ 0.34
HOXA3-201ENST00000317201 CCDC172P0C7W6 258 aa17.16■□□□□ 0.34
HOXA3-201ENST00000317201 HSPD1P10809 573 aaKnown RBP17.16■□□□□ 0.34
HOXA3-201ENST00000317201 ZNF827Q17R98 1081 aa17.16■□□□□ 0.34
HOXA3-201ENST00000317201 PIH1D3Q9NQM4 214 aaKnown RBP17.16■□□□□ 0.34
HOXA3-201ENST00000317201 M0R2C6 588 aa17.16■□□□□ 0.34
HOXA3-201ENST00000317201 CHGBP05060 677 aa17.16■□□□□ 0.34
HOXA3-201ENST00000317201 CAVIN4Q5BKX8 364 aa17.16■□□□□ 0.34
HOXA3-201ENST00000317201 POTEAQ6S8J7 498 aa17.16■□□□□ 0.34
HOXA3-201ENST00000317201 SPC24Q8NBT2 197 aa17.16■□□□□ 0.34
HOXA3-201ENST00000317201 ZNF526Q8TF50 670 aaPredicted RBP17.16■□□□□ 0.34
HOXA3-201ENST00000317201 GTF3C6Q969F1 213 aa17.16■□□□□ 0.34
HOXA3-201ENST00000317201 EP400Q96L91 3159 aa17.15■□□□□ 0.34
HOXA3-201ENST00000317201 BCAMP50895 628 aa17.15■□□□□ 0.34
HOXA3-201ENST00000317201 ADCK5Q3MIX3 580 aa17.15■□□□□ 0.34
HOXA3-201ENST00000317201 KMT5BQ4FZB7 885 aa17.15■□□□□ 0.34
HOXA3-201ENST00000317201 MAP3K12Q12852 859 aa17.15■□□□□ 0.34
HOXA3-201ENST00000317201 E2F4Q16254 413 aa17.15■□□□□ 0.34
HOXA3-201ENST00000317201 CLEC17AQ6ZS10 378 aa17.15■□□□□ 0.34
HOXA3-201ENST00000317201 LIMCH1Q9UPQ0 1083 aa17.15■□□□□ 0.34
HOXA3-201ENST00000317201 HOXA10P31260 410 aaPredicted RBP17.14■□□□□ 0.33
HOXA3-201ENST00000317201 FBXO33Q7Z6M2 555 aa17.14■□□□□ 0.33
HOXA3-201ENST00000317201 ZSCAN31Q96LW9 406 aaPredicted RBP17.14■□□□□ 0.33
HOXA3-201ENST00000317201 C16orf45Q96MC5 204 aaPredicted RBP17.14■□□□□ 0.33
HOXA3-201ENST00000317201 PDRG1Q9NUG6 133 aa17.14■□□□□ 0.33
HOXA3-201ENST00000317201 TCRBV5S4A2TA0A5A2 114 aa17.14■□□□□ 0.33
HOXA3-201ENST00000317201 HMGB1P09429 215 aaKnown RBP17.14■□□□□ 0.33
HOXA3-201ENST00000317201 DDR1Q08345 913 aa17.14■□□□□ 0.33
HOXA3-201ENST00000317201 ANKRD1Q15327 319 aa17.14■□□□□ 0.33
HOXA3-201ENST00000317201 WASHC4Q2M389 1173 aa17.14■□□□□ 0.33
HOXA3-201ENST00000317201 FOXD4L6Q3SYB3 417 aaPredicted RBP17.14■□□□□ 0.33
HOXA3-201ENST00000317201 GRIPAP1Q4V328 841 aa17.14■□□□□ 0.33
HOXA3-201ENST00000317201 SLC9C2Q5TAH2 1124 aa17.14■□□□□ 0.33
HOXA3-201ENST00000317201 FOXD4L3Q6VB84 417 aaPredicted RBP17.14■□□□□ 0.33
HOXA3-201ENST00000317201 QSER1Q2KHR3 1735 aa17.14■□□□□ 0.33
HOXA3-201ENST00000317201 MYO1CO00159 1063 aa17.13■□□□□ 0.33
HOXA3-201ENST00000317201 AK2P54819 239 aa17.13■□□□□ 0.33
HOXA3-201ENST00000317201 RBM17Q96I25 401 aaKnown RBP17.13■□□□□ 0.33
HOXA3-201ENST00000317201 DENND2AQ9ULE3 1009 aa17.13■□□□□ 0.33
HOXA3-201ENST00000317201 LEMD3Q9Y2U8 911 aa17.13■□□□□ 0.33
HOXA3-201ENST00000317201 SNAP23O00161 211 aa17.13■□□□□ 0.33
HOXA3-201ENST00000317201 PDE6AP16499 860 aa17.13■□□□□ 0.33
HOXA3-201ENST00000317201 GUCY2CP25092 1073 aa17.13■□□□□ 0.33
HOXA3-201ENST00000317201 CASQ1P31415 396 aa17.13■□□□□ 0.33
HOXA3-201ENST00000317201 NUCB2P80303 420 aa17.13■□□□□ 0.33
HOXA3-201ENST00000317201 BLOC1S2Q6QNY1 142 aa17.13■□□□□ 0.33
HOXA3-201ENST00000317201 COL23A1Q86Y22 540 aaPredicted RBP17.13■□□□□ 0.33
HOXA3-201ENST00000317201 KIAA1524Q8TCG1 905 aa17.13■□□□□ 0.33
HOXA3-201ENST00000317201 RPGRQ92834 1020 aaKnown RBP17.13■□□□□ 0.33
HOXA3-201ENST00000317201 SH2B1Q9NRF2 756 aaPredicted RBP17.13■□□□□ 0.33
HOXA3-201ENST00000317201 CYP21A2P08686 494 aa17.12■□□□□ 0.33
HOXA3-201ENST00000317201 RPS6KB1P23443 525 aa17.12■□□□□ 0.33
HOXA3-201ENST00000317201 KRBA2Q6ZNG9 492 aa17.12■□□□□ 0.33
HOXA3-201ENST00000317201 C15orf52Q6ZUT6 534 aaKnown RBP17.12■□□□□ 0.33
HOXA3-201ENST00000317201 TMC4Q7Z404 712 aa17.12■□□□□ 0.33
HOXA3-201ENST00000317201 FAM84BQ96KN1 310 aaPredicted RBP17.12■□□□□ 0.33
HOXA3-201ENST00000317201 CRAMP1Q96RY5 1269 aa17.12■□□□□ 0.33
HOXA3-201ENST00000317201 PUS7LQ9H0K6 701 aaKnown RBP17.12■□□□□ 0.33
HOXA3-201ENST00000317201 KCNF1Q9H3M0 494 aa17.12■□□□□ 0.33
HOXA3-201ENST00000317201 IRS2Q9Y4H2 1338 aa17.12■□□□□ 0.33
HOXA3-201ENST00000317201 IDH1O75874 414 aaKnown RBP17.11■□□□□ 0.33
HOXA3-201ENST00000317201 SLFNL1Q499Z3 407 aa17.11■□□□□ 0.33
HOXA3-201ENST00000317201 CCDC24Q8N4L8 307 aa17.11■□□□□ 0.33
HOXA3-201ENST00000317201 ZNF592Q92610 1267 aa17.11■□□□□ 0.33
HOXA3-201ENST00000317201 ZMYM6O95789 1325 aa17.11■□□□□ 0.33
HOXA3-201ENST00000317201 GPAA1O43292 621 aa17.11■□□□□ 0.33
HOXA3-201ENST00000317201 BBOX1O75936 387 aa17.11■□□□□ 0.33
HOXA3-201ENST00000317201 NEK1Q96PY6 1258 aa17.11■□□□□ 0.33
HOXA3-201ENST00000317201 ZNF532Q9HCE3 1301 aa17.11■□□□□ 0.33
HOXA3-201ENST00000317201 XDHP47989 1333 aa17.1■□□□□ 0.33
HOXA3-201ENST00000317201 POLR3GO15318 223 aaPredicted RBP17.1■□□□□ 0.33
HOXA3-201ENST00000317201 RNF217Q8TC41 542 aa17.1■□□□□ 0.33
HOXA3-201ENST00000317201 BRIP1Q9BX63 1249 aa17.1■□□□□ 0.33
HOXA3-201ENST00000317201 MYO5AQ9Y4I1 1855 aaKnown RBP17.1■□□□□ 0.33
HOXA3-201ENST00000317201 PNPLA7Q6ZV29 1317 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms