RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 LRRIQ1Q96JM4 1722 aa14.59□□□□□ -0.07
SH3PXD2A-201ENST00000315994 DNAJC25Q9H1X3 360 aa14.59□□□□□ -0.07
SH3PXD2A-201ENST00000315994 CTDSPL2Q05D32 466 aa14.59□□□□□ -0.07
SH3PXD2A-201ENST00000315994 TAF3Q5VWG9 929 aa14.59□□□□□ -0.07
SH3PXD2A-201ENST00000315994 HEG1Q9ULI3 1381 aa14.59□□□□□ -0.07
SH3PXD2A-201ENST00000315994 LMOD1P29536 600 aaPredicted RBP14.59□□□□□ -0.07
SH3PXD2A-201ENST00000315994 TYRO3Q06418 890 aa14.59□□□□□ -0.07
SH3PXD2A-201ENST00000315994 THRAP3Q9Y2W1 955 aaKnown RBP14.59□□□□□ -0.07
SH3PXD2A-201ENST00000315994 B4DLN1 442 aa14.59□□□□□ -0.07
SH3PXD2A-201ENST00000315994 TNNT1P13805 278 aa14.59□□□□□ -0.07
SH3PXD2A-201ENST00000315994 CLCN1P35523 988 aa14.59□□□□□ -0.07
SH3PXD2A-201ENST00000315994 MRPL12P52815 198 aaKnown RBP14.59□□□□□ -0.07
SH3PXD2A-201ENST00000315994 GBP3Q9H0R5 595 aa14.59□□□□□ -0.07
SH3PXD2A-201ENST00000315994 GPR108Q9NPR9 543 aa14.59□□□□□ -0.07
SH3PXD2A-201ENST00000315994 WWC3Q9ULE0 1092 aa14.59□□□□□ -0.07
SH3PXD2A-201ENST00000315994 URI1O94763 535 aaPredicted RBP14.58□□□□□ -0.07
SH3PXD2A-201ENST00000315994 ENOX2Q16206 610 aaKnown RBP14.58□□□□□ -0.07
SH3PXD2A-201ENST00000315994 AOPEPQ8N6M6 819 aa14.58□□□□□ -0.07
SH3PXD2A-201ENST00000315994 CLTCQ00610 1675 aaKnown RBP14.58□□□□□ -0.07
SH3PXD2A-201ENST00000315994 E7EWF7 191 aa14.58□□□□□ -0.08
SH3PXD2A-201ENST00000315994 LRRC24Q50LG9 513 aa14.58□□□□□ -0.08
SH3PXD2A-201ENST00000315994 STAP2Q9UGK3 403 aa14.58□□□□□ -0.08
SH3PXD2A-201ENST00000315994 MED14O60244 1454 aa14.58□□□□□ -0.08
SH3PXD2A-201ENST00000315994 ALS2CR12Q96Q35 445 aa14.58□□□□□ -0.08
SH3PXD2A-201ENST00000315994 TRMT1Q9NXH9 659 aaKnown RBP14.58□□□□□ -0.08
SH3PXD2A-201ENST00000315994 ARPP21Q9UBL0 812 aaPredicted RBP14.58□□□□□ -0.08
SH3PXD2A-201ENST00000315994 BAG6P46379 1132 aa14.58□□□□□ -0.08
SH3PXD2A-201ENST00000315994 IQUBQ8NA54 791 aa14.57□□□□□ -0.08
SH3PXD2A-201ENST00000315994 ARHGEF10LQ9HCE6 1279 aa14.57□□□□□ -0.08
SH3PXD2A-201ENST00000315994 ZBTB1Q9Y2K1 713 aa14.57□□□□□ -0.08
SH3PXD2A-201ENST00000315994 ELP1O95163 1332 aa14.57□□□□□ -0.08
SH3PXD2A-201ENST00000315994 PRDM1O75626 825 aa14.57□□□□□ -0.08
SH3PXD2A-201ENST00000315994 LARGE2Q8N3Y3 721 aa14.57□□□□□ -0.08
SH3PXD2A-201ENST00000315994 NCOA5Q9HCD5 579 aaKnown RBP14.57□□□□□ -0.08
SH3PXD2A-201ENST00000315994 CWC15Q9P013 229 aaKnown RBP14.57□□□□□ -0.08
SH3PXD2A-201ENST00000315994 ATP2B4P23634 1241 aa14.57□□□□□ -0.08
SH3PXD2A-201ENST00000315994 USPL1Q5W0Q7 1092 aa14.57□□□□□ -0.08
SH3PXD2A-201ENST00000315994 EDC3Q96F86 508 aaKnown RBP14.57□□□□□ -0.08
SH3PXD2A-201ENST00000315994 USP37Q86T82 979 aa14.57□□□□□ -0.08
SH3PXD2A-201ENST00000315994 BICD1Q96G01 975 aa14.57□□□□□ -0.08
SH3PXD2A-201ENST00000315994 PRAMEF22A3QJZ6 481 aa14.56□□□□□ -0.08
SH3PXD2A-201ENST00000315994 GREM2Q9H772 168 aa14.56□□□□□ -0.08
SH3PXD2A-201ENST00000315994 A0A0D9SFI3 127 aa14.56□□□□□ -0.08
SH3PXD2A-201ENST00000315994 AKNAD1Q5T1N1 836 aa14.56□□□□□ -0.08
SH3PXD2A-201ENST00000315994 CCDC174Q6PII3 467 aa14.56□□□□□ -0.08
SH3PXD2A-201ENST00000315994 GLT8D2Q9H1C3 349 aa14.56□□□□□ -0.08
SH3PXD2A-201ENST00000315994 QTRT2Q9H974 415 aaKnown RBP14.56□□□□□ -0.08
SH3PXD2A-201ENST00000315994 FAM160A1Q05DH4 1040 aa14.56□□□□□ -0.08
SH3PXD2A-201ENST00000315994 CHRNDQ07001 517 aa14.56□□□□□ -0.08
SH3PXD2A-201ENST00000315994 PPARAQ07869 468 aa14.56□□□□□ -0.08
SH3PXD2A-201ENST00000315994 LZTS2Q9BRK4 669 aa14.56□□□□□ -0.08
SH3PXD2A-201ENST00000315994 GPCPD1Q9NPB8 672 aa14.56□□□□□ -0.08
SH3PXD2A-201ENST00000315994 V9GY48 417 aaPredicted RBP14.56□□□□□ -0.08
SH3PXD2A-201ENST00000315994 BICDL2A1A5D9 508 aa14.56□□□□□ -0.08
SH3PXD2A-201ENST00000315994 CCDC172P0C7W6 258 aa14.56□□□□□ -0.08
SH3PXD2A-201ENST00000315994 C16orf45Q96MC5 204 aaPredicted RBP14.56□□□□□ -0.08
SH3PXD2A-201ENST00000315994 ANO1Q5XXA6 986 aa14.55□□□□□ -0.08
SH3PXD2A-201ENST00000315994 OSBPL3Q9H4L5 887 aa14.55□□□□□ -0.08
SH3PXD2A-201ENST00000315994 MCM3P25205 808 aa14.55□□□□□ -0.08
SH3PXD2A-201ENST00000315994 PRDM10Q9NQV6 1147 aa14.55□□□□□ -0.08
SH3PXD2A-201ENST00000315994 PTCH1Q13635 1447 aa14.55□□□□□ -0.08
SH3PXD2A-201ENST00000315994 PAFAH1B1P43034 410 aa14.55□□□□□ -0.08
SH3PXD2A-201ENST00000315994 PLS1Q14651 629 aa14.55□□□□□ -0.08
SH3PXD2A-201ENST00000315994 GJA3Q9Y6H8 435 aa14.55□□□□□ -0.08
SH3PXD2A-201ENST00000315994 PDE8BO95263 885 aa14.55□□□□□ -0.08
SH3PXD2A-201ENST00000315994 SNW1Q13573 536 aaKnown RBP14.55□□□□□ -0.08
SH3PXD2A-201ENST00000315994 TGFBRAP1Q8WUH2 860 aa14.55□□□□□ -0.08
SH3PXD2A-201ENST00000315994 ATG3Q9NT62 314 aa14.55□□□□□ -0.08
SH3PXD2A-201ENST00000315994 TNS3Q68CZ2 1445 aa14.55□□□□□ -0.08
SH3PXD2A-201ENST00000315994 ERVV-1B6SEH8 477 aa14.55□□□□□ -0.08
SH3PXD2A-201ENST00000315994 ZNF174Q15697 407 aa14.55□□□□□ -0.08
SH3PXD2A-201ENST00000315994 LEKR1Q6ZMV7 388 aa14.55□□□□□ -0.08
SH3PXD2A-201ENST00000315994 MAPKAPK5Q8IW41 473 aa14.55□□□□□ -0.08
SH3PXD2A-201ENST00000315994 USP31Q70CQ4 1352 aa14.54□□□□□ -0.08
SH3PXD2A-201ENST00000315994 PDE6AP16499 860 aa14.54□□□□□ -0.08
SH3PXD2A-201ENST00000315994 UNC5CLQ8IV45 518 aa14.54□□□□□ -0.08
SH3PXD2A-201ENST00000315994 EIF6P56537 245 aaKnown RBP14.54□□□□□ -0.08
SH3PXD2A-201ENST00000315994 FAM196AQ6ZSG2 479 aa14.54□□□□□ -0.08
SH3PXD2A-201ENST00000315994 EHBP1Q8NDI1 1231 aa14.54□□□□□ -0.08
SH3PXD2A-201ENST00000315994 KRT13P13646 458 aa14.54□□□□□ -0.08
SH3PXD2A-201ENST00000315994 GYG1P46976 350 aa14.54□□□□□ -0.08
SH3PXD2A-201ENST00000315994 BCAMP50895 628 aa14.54□□□□□ -0.08
SH3PXD2A-201ENST00000315994 LETM2Q2VYF4 491 aa14.54□□□□□ -0.08
SH3PXD2A-201ENST00000315994 PDCL2Q8N4E4 241 aa14.54□□□□□ -0.08
SH3PXD2A-201ENST00000315994 RIMBP3CA6NJZ7 1639 aa14.54□□□□□ -0.08
SH3PXD2A-201ENST00000315994 RIMBP3BA6NNM3 1639 aa14.54□□□□□ -0.08
SH3PXD2A-201ENST00000315994 RIMBP3Q9UFD9 1639 aa14.54□□□□□ -0.08
SH3PXD2A-201ENST00000315994 VWA3AA6NCI4 1184 aa14.54□□□□□ -0.08
SH3PXD2A-201ENST00000315994 USP8P40818 1118 aa14.54□□□□□ -0.08
SH3PXD2A-201ENST00000315994 PLCD1P51178 756 aa14.54□□□□□ -0.08
SH3PXD2A-201ENST00000315994 UBE4AQ14139 1066 aa14.54□□□□□ -0.08
SH3PXD2A-201ENST00000315994 TMCO3Q6UWJ1 677 aa14.54□□□□□ -0.08
SH3PXD2A-201ENST00000315994 DLC1Q96QB1 1528 aa14.53□□□□□ -0.08
SH3PXD2A-201ENST00000315994 PTH1RQ03431 593 aa14.53□□□□□ -0.08
SH3PXD2A-201ENST00000315994 DIS3L2Q8IYB7 885 aaKnown RBP14.53□□□□□ -0.08
SH3PXD2A-201ENST00000315994 HOOK2Q96ED9 719 aa14.53□□□□□ -0.08
SH3PXD2A-201ENST00000315994 MAP9Q49MG5 647 aa14.53□□□□□ -0.08
SH3PXD2A-201ENST00000315994 MFSD14BQ5SR56 506 aa14.53□□□□□ -0.08
SH3PXD2A-201ENST00000315994 NLGN1Q8N2Q7 840 aa14.53□□□□□ -0.08
SH3PXD2A-201ENST00000315994 ZC3H13Q5T200 1668 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms