RNA–Protein interactions for RNA: ENST00000315251.10

CHDH-201, Transcript of choline dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHDH, Length 7,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHDH-201ENST00000315251 VPS16Q9H269 839 aa16.87■□□□□ 0.29
CHDH-201ENST00000315251 BAG1Q99933 345 aaPredicted RBP16.87■□□□□ 0.29
CHDH-201ENST00000315251 A0A1B0GVL5 298 aa16.86■□□□□ 0.29
CHDH-201ENST00000315251 CCNT1O60563 726 aaKnown RBP16.86■□□□□ 0.29
CHDH-201ENST00000315251 CSRNP2Q9H175 543 aa16.86■□□□□ 0.29
CHDH-201ENST00000315251 TXNDC9O14530 226 aa16.86■□□□□ 0.29
CHDH-201ENST00000315251 TNFAIP3P21580 790 aa16.86■□□□□ 0.29
CHDH-201ENST00000315251 PPP2R3AQ06190 1150 aa16.86■□□□□ 0.29
CHDH-201ENST00000315251 SV2BQ7L1I2 683 aa16.86■□□□□ 0.29
CHDH-201ENST00000315251 DAPK1P53355 1430 aa16.86■□□□□ 0.29
CHDH-201ENST00000315251 CACNA2D3Q8IZS8 1091 aa16.86■□□□□ 0.29
CHDH-201ENST00000315251 AKR1B15C9JRZ8 316 aaPredicted RBP16.86■□□□□ 0.29
CHDH-201ENST00000315251 FCHSD1Q86WN1 690 aa16.86■□□□□ 0.29
CHDH-201ENST00000315251 TRPC3Q13507 836 aa16.86■□□□□ 0.29
CHDH-201ENST00000315251 DIXDC1Q155Q3 683 aa16.86■□□□□ 0.29
CHDH-201ENST00000315251 USTQ9Y2C2 406 aa16.86■□□□□ 0.29
CHDH-201ENST00000315251 EIF6P56537 245 aaKnown RBP16.85■□□□□ 0.29
CHDH-201ENST00000315251 IFT74Q96LB3 600 aa16.85■□□□□ 0.29
CHDH-201ENST00000315251 BUB1BO60566 1050 aaPredicted RBP16.85■□□□□ 0.29
CHDH-201ENST00000315251 PARP1P09874 1014 aaKnown RBP16.85■□□□□ 0.29
CHDH-201ENST00000315251 AK2P54819 239 aa16.85■□□□□ 0.29
CHDH-201ENST00000315251 LDHBP07195 334 aaKnown RBP16.85■□□□□ 0.29
CHDH-201ENST00000315251 IQUBQ8NA54 791 aa16.85■□□□□ 0.29
CHDH-201ENST00000315251 ZCRB1Q8TBF4 217 aaKnown RBP16.85■□□□□ 0.29
CHDH-201ENST00000315251 MCUR1Q96AQ8 359 aa16.85■□□□□ 0.29
CHDH-201ENST00000315251 DDX39AO00148 427 aaKnown RBP16.84■□□□□ 0.29
CHDH-201ENST00000315251 RFX1P22670 979 aa16.84■□□□□ 0.29
CHDH-201ENST00000315251 PTPDC1A2A3K4 754 aa16.84■□□□□ 0.29
CHDH-201ENST00000315251 MAN1A1P33908 653 aa16.84■□□□□ 0.29
CHDH-201ENST00000315251 EVCP57679 992 aa16.84■□□□□ 0.29
CHDH-201ENST00000315251 JDP2Q8WYK2 163 aa16.84■□□□□ 0.29
CHDH-201ENST00000315251 GJA3Q9Y6H8 435 aa16.84■□□□□ 0.29
CHDH-201ENST00000315251 ZNF365Q70YC5 407 aa16.84■□□□□ 0.29
CHDH-201ENST00000315251 CNGA4Q8IV77 575 aa16.84■□□□□ 0.29
CHDH-201ENST00000315251 GSDMBQ8TAX9 411 aa16.84■□□□□ 0.29
CHDH-201ENST00000315251 GBP1P32455 592 aa16.84■□□□□ 0.29
CHDH-201ENST00000315251 RSPH3Q86UC2 560 aa16.84■□□□□ 0.29
CHDH-201ENST00000315251 STK10O94804 968 aaKnown RBP16.84■□□□□ 0.29
CHDH-201ENST00000315251 PSMB7Q99436 277 aa16.84■□□□□ 0.29
CHDH-201ENST00000315251 CPSF2Q9P2I0 782 aaKnown RBP16.84■□□□□ 0.29
CHDH-201ENST00000315251 GNAT2P19087 354 aa16.84■□□□□ 0.29
CHDH-201ENST00000315251 SMTNP53814 917 aa16.84■□□□□ 0.29
CHDH-201ENST00000315251 AFAP1L1Q8TED9 768 aa16.84■□□□□ 0.29
CHDH-201ENST00000315251 ZKSCAN5Q9Y2L8 839 aa16.84■□□□□ 0.29
CHDH-201ENST00000315251 ARID4AP29374 1257 aaPredicted RBP16.83■□□□□ 0.29
CHDH-201ENST00000315251 IL15P40933 162 aaPredicted RBP16.83■□□□□ 0.29
CHDH-201ENST00000315251 CEBPAP49715 358 aaPredicted RBP16.83■□□□□ 0.29
CHDH-201ENST00000315251 SH2D4BQ5SQS7 431 aa16.83■□□□□ 0.29
CHDH-201ENST00000315251 ZNF408Q9H9D4 720 aa16.83■□□□□ 0.29
CHDH-201ENST00000315251 ZYXQ15942 572 aaKnown RBP16.83■□□□□ 0.29
CHDH-201ENST00000315251 C8orf74Q6P047 294 aa16.83■□□□□ 0.29
CHDH-201ENST00000315251 CCDC62Q6P9F0 684 aa16.83■□□□□ 0.28
CHDH-201ENST00000315251 SWAP70Q9UH65 585 aa16.83■□□□□ 0.28
CHDH-201ENST00000315251 GRIN2BQ13224 1484 aa16.83■□□□□ 0.28
CHDH-201ENST00000315251 TBC1D8BQ0IIM8 1120 aa16.83■□□□□ 0.28
CHDH-201ENST00000315251 BEND3Q5T5X7 828 aa16.83■□□□□ 0.28
CHDH-201ENST00000315251 XRCC6P12956 609 aaKnown RBP eCLIP16.83■□□□□ 0.28
CHDH-201ENST00000315251 PDE4DQ08499 809 aa16.83■□□□□ 0.28
CHDH-201ENST00000315251 CREB3L3Q68CJ9 461 aa16.83■□□□□ 0.28
CHDH-201ENST00000315251 C8orf37Q96NL8 207 aa16.83■□□□□ 0.28
CHDH-201ENST00000315251 DZIP3Q86Y13 1208 aaKnown RBP16.82■□□□□ 0.28
CHDH-201ENST00000315251 U2AF2P26368 475 aaKnown RBP eCLIP16.82■□□□□ 0.288e-9■□□□□ 8.9
CHDH-201ENST00000315251 NYXQ9GZU5 481 aa16.82■□□□□ 0.28
CHDH-201ENST00000315251 ACTN4O43707 911 aaKnown RBP16.82■□□□□ 0.28
CHDH-201ENST00000315251 FNBP4Q8N3X1 1017 aaPredicted RBP16.82■□□□□ 0.28
CHDH-201ENST00000315251 AFAP1L2Q8N4X5 818 aa16.82■□□□□ 0.28
CHDH-201ENST00000315251 TUBB4BP68371 445 aa16.82■□□□□ 0.28
CHDH-201ENST00000315251 STRN3Q13033 797 aa16.82■□□□□ 0.28
CHDH-201ENST00000315251 LONRF3Q496Y0 759 aa16.82■□□□□ 0.28
CHDH-201ENST00000315251 UBL4BQ8N7F7 174 aa16.82■□□□□ 0.28
CHDH-201ENST00000315251 NDUFAB1O14561 156 aa16.82■□□□□ 0.28
CHDH-201ENST00000315251 PLCG2P16885 1265 aa16.82■□□□□ 0.28
CHDH-201ENST00000315251 IRX3P78415 501 aaPredicted RBP16.82■□□□□ 0.28
CHDH-201ENST00000315251 ASIC2Q16515 512 aa16.82■□□□□ 0.28
CHDH-201ENST00000315251 ASIC3Q9UHC3 531 aa16.82■□□□□ 0.28
CHDH-201ENST00000315251 LRRC43Q8N309 656 aa16.82■□□□□ 0.28
CHDH-201ENST00000315251 TBC1D7Q9P0N9 293 aa16.82■□□□□ 0.28
CHDH-201ENST00000315251 MYCLP12524 364 aaPredicted RBP16.81■□□□□ 0.28
CHDH-201ENST00000315251 IGSF22Q8N9C0 903 aa16.81■□□□□ 0.28
CHDH-201ENST00000315251 TFCP2L1Q9NZI6 479 aa16.81■□□□□ 0.28
CHDH-201ENST00000315251 NOP56O00567 594 aaKnown RBP16.81■□□□□ 0.28
CHDH-201ENST00000315251 GPHNQ9NQX3 736 aaPredicted RBP16.81■□□□□ 0.28
CHDH-201ENST00000315251 DHX29Q7Z478 1369 aaKnown RBP16.81■□□□□ 0.28
CHDH-201ENST00000315251 RNF113AO15541 343 aaKnown RBP16.81■□□□□ 0.28
CHDH-201ENST00000315251 LIN9Q5TKA1 542 aa16.81■□□□□ 0.28
CHDH-201ENST00000315251 BSPRYQ5W0U4 402 aa16.81■□□□□ 0.28
CHDH-201ENST00000315251 B4GALNT4Q76KP1 1039 aa16.81■□□□□ 0.28
CHDH-201ENST00000315251 CACYBPQ9HB71 228 aaKnown RBP16.81■□□□□ 0.28
CHDH-201ENST00000315251 CETN3O15182 167 aa16.81■□□□□ 0.28
CHDH-201ENST00000315251 LMNTD2Q8IXW0 634 aa16.81■□□□□ 0.28
CHDH-201ENST00000315251 DACT3Q96B18 629 aaPredicted RBP16.81■□□□□ 0.28
CHDH-201ENST00000315251 PLEKHA4Q9H4M7 779 aa16.81■□□□□ 0.28
CHDH-201ENST00000315251 PARP3Q9Y6F1 533 aa16.81■□□□□ 0.28
CHDH-201ENST00000315251 FBXO31Q5XUX0 539 aaPredicted RBP16.8■□□□□ 0.28
CHDH-201ENST00000315251 TFCP2Q12800 502 aa16.8■□□□□ 0.28
CHDH-201ENST00000315251 ZNF853P0CG23 659 aa16.8■□□□□ 0.28
CHDH-201ENST00000315251 RAD51AP2Q09MP3 1159 aa16.8■□□□□ 0.28
CHDH-201ENST00000315251 KMT5BQ4FZB7 885 aa16.8■□□□□ 0.28
CHDH-201ENST00000315251 MGARPQ8TDB4 240 aa16.8■□□□□ 0.28
CHDH-201ENST00000315251 DDX27Q96GQ7 796 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms