RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 STRIP1Q5VSL9 837 aa26.74■■□□□ 1.87
IRF3-201ENST00000309877 TMX3Q96JJ7 454 aa26.74■■□□□ 1.87
IRF3-201ENST00000309877 SLKQ9H2G2 1235 aaPredicted RBP26.74■■□□□ 1.87
IRF3-201ENST00000309877 CERS3Q8IU89 383 aa26.73■■□□□ 1.87
IRF3-201ENST00000309877 CERS5Q8N5B7 392 aa26.73■■□□□ 1.87
IRF3-201ENST00000309877 VPS33BQ9H267 617 aa26.73■■□□□ 1.87
IRF3-201ENST00000309877 KCNQ5Q9NR82 932 aa26.73■■□□□ 1.87
IRF3-201ENST00000309877 CHD4Q14839 1912 aa26.73■■□□□ 1.87
IRF3-201ENST00000309877 USP17L3A6NCW0 530 aa26.73■■□□□ 1.87
IRF3-201ENST00000309877 USP17L4A6NCW7 530 aa26.73■■□□□ 1.87
IRF3-201ENST00000309877 ANKRD1Q15327 319 aa26.73■■□□□ 1.87
IRF3-201ENST00000309877 GIMAP6Q6P9H5 292 aa26.73■■□□□ 1.87
IRF3-201ENST00000309877 USP17L1Q7RTZ2 530 aa26.73■■□□□ 1.87
IRF3-201ENST00000309877 ZNF277Q9NRM2 450 aaPredicted RBP26.73■■□□□ 1.87
IRF3-201ENST00000309877 PPP4CP60510 307 aa26.72■■□□□ 1.87
IRF3-201ENST00000309877 DHX32Q7L7V1 743 aaKnown RBP26.72■■□□□ 1.87
IRF3-201ENST00000309877 LARGE2Q8N3Y3 721 aa26.72■■□□□ 1.87
IRF3-201ENST00000309877 FAM163AQ96GL9 167 aaPredicted RBP26.72■■□□□ 1.87
IRF3-201ENST00000309877 MXD3Q9BW11 206 aa26.72■■□□□ 1.87
IRF3-201ENST00000309877 ALDH8A1Q9H2A2 487 aaPredicted RBP26.72■■□□□ 1.87
IRF3-201ENST00000309877 TTF2Q9UNY4 1162 aaKnown RBP26.72■■□□□ 1.87
IRF3-201ENST00000309877 LIMCH1Q9UPQ0 1083 aa26.72■■□□□ 1.87
IRF3-201ENST00000309877 BCS1LQ9Y276 419 aa26.72■■□□□ 1.87
IRF3-201ENST00000309877 F8W031 263 aaPredicted RBP26.71■■□□□ 1.87
IRF3-201ENST00000309877 FKBP1AP62942 108 aaKnown RBP26.71■■□□□ 1.87
IRF3-201ENST00000309877 TRDNQ13061 729 aa26.71■■□□□ 1.87
IRF3-201ENST00000309877 COL9A3Q14050 684 aaPredicted RBP26.71■■□□□ 1.87
IRF3-201ENST00000309877 TCEANC2Q96MN5 208 aa26.71■■□□□ 1.87
IRF3-201ENST00000309877 ATP8A2Q9NTI2 1148 aa26.71■■□□□ 1.87
IRF3-201ENST00000309877 FOXD4L1Q9NU39 408 aa26.71■■□□□ 1.87
IRF3-201ENST00000309877 BTDP43251 543 aa26.7■■□□□ 1.87
IRF3-201ENST00000309877 RALYLQ86SE5 291 aaKnown RBP26.7■■□□□ 1.87
IRF3-201ENST00000309877 NCOA7Q8NI08 942 aa26.7■■□□□ 1.87
IRF3-201ENST00000309877 GPR75-ASB3A0A0A6YYF3 556 aa26.7■■□□□ 1.86
IRF3-201ENST00000309877 PLCG2P16885 1265 aa26.7■■□□□ 1.86
IRF3-201ENST00000309877 NBPF3Q9H094 633 aa26.7■■□□□ 1.86
IRF3-201ENST00000309877 FGD1P98174 961 aa26.69■■□□□ 1.86
IRF3-201ENST00000309877 DACT2Q5SW24 774 aa26.69■■□□□ 1.86
IRF3-201ENST00000309877 TBC1D10CQ8IV04 446 aa26.69■■□□□ 1.86
IRF3-201ENST00000309877 SH3RF3Q8TEJ3 882 aaPredicted RBP26.69■■□□□ 1.86
IRF3-201ENST00000309877 LARP6Q9BRS8 491 aaKnown RBP26.69■■□□□ 1.86
IRF3-201ENST00000309877 GAKO14976 1311 aa26.68■■□□□ 1.86
IRF3-201ENST00000309877 MINDY4BA8MYZ0 360 aa26.68■■□□□ 1.86
IRF3-201ENST00000309877 USP5P45974 858 aa26.68■■□□□ 1.86
IRF3-201ENST00000309877 CTDSPL2Q05D32 466 aa26.68■■□□□ 1.86
IRF3-201ENST00000309877 ZSCAN31Q96LW9 406 aaPredicted RBP26.68■■□□□ 1.86
IRF3-201ENST00000309877 DCP1AQ9NPI6 582 aaPredicted RBP26.68■■□□□ 1.86
IRF3-201ENST00000309877 PPARAQ07869 468 aa26.67■■□□□ 1.86
IRF3-201ENST00000309877 Q6ZUG5 572 aa26.67■■□□□ 1.86
IRF3-201ENST00000309877 NLGN2Q8NFZ4 835 aa26.67■■□□□ 1.86
IRF3-201ENST00000309877 TAOK3Q9H2K8 898 aa26.67■■□□□ 1.86
IRF3-201ENST00000309877 IARSP41252 1262 aaKnown RBP26.66■■□□□ 1.86
IRF3-201ENST00000309877 EXOSC10Q01780 885 aaKnown RBP26.66■■□□□ 1.86
IRF3-201ENST00000309877 DAGLAQ9Y4D2 1042 aa26.66■■□□□ 1.86
IRF3-201ENST00000309877 YDJCA8MPS7 323 aa26.66■■□□□ 1.86
IRF3-201ENST00000309877 MCM5P33992 734 aa26.66■■□□□ 1.86
IRF3-201ENST00000309877 CUL4AQ13619 759 aa26.66■■□□□ 1.86
IRF3-201ENST00000309877 AKNAD1Q5T1N1 836 aa26.66■■□□□ 1.86
IRF3-201ENST00000309877 MFSD6Q6ZSS7 791 aa26.66■■□□□ 1.86
IRF3-201ENST00000309877 NIM1KQ8IY84 436 aa26.66■■□□□ 1.86
IRF3-201ENST00000309877 MYH2Q9UKX2 1941 aa26.65■■□□□ 1.86
IRF3-201ENST00000309877 SCNN1DP51172 638 aa26.65■■□□□ 1.86
IRF3-201ENST00000309877 TOB2Q14106 344 aaPredicted RBP26.65■■□□□ 1.86
IRF3-201ENST00000309877 CTR9Q6PD62 1173 aa26.65■■□□□ 1.86
IRF3-201ENST00000309877 MB21D2Q8IYB1 491 aaPredicted RBP26.65■■□□□ 1.86
IRF3-201ENST00000309877 RNF41Q9H4P4 317 aaPredicted RBP26.65■■□□□ 1.86
IRF3-201ENST00000309877 CNNM2Q9H8M5 875 aa26.65■■□□□ 1.86
IRF3-201ENST00000309877 ANAPC4Q9UJX5 808 aa26.65■■□□□ 1.86
IRF3-201ENST00000309877 BRCA1P38398 1863 aaKnown RBP26.65■■□□□ 1.86
IRF3-201ENST00000309877 USP17L12C9JPN9 530 aa26.64■■□□□ 1.86
IRF3-201ENST00000309877 USP17L21D6R901 530 aa26.64■■□□□ 1.86
IRF3-201ENST00000309877 HHIPL2Q6UWX4 724 aa26.64■■□□□ 1.86
IRF3-201ENST00000309877 KIAA0825Q8IV33 1275 aa26.64■■□□□ 1.86
IRF3-201ENST00000309877 TEX11Q8IYF3 940 aa26.64■■□□□ 1.86
IRF3-201ENST00000309877 TEKT1Q969V4 418 aa26.64■■□□□ 1.86
IRF3-201ENST00000309877 LRRC2Q9BYS8 371 aa26.64■■□□□ 1.86
IRF3-201ENST00000309877 SH2B1Q9NRF2 756 aaPredicted RBP26.64■■□□□ 1.86
IRF3-201ENST00000309877 CHST3Q7LGC8 479 aa26.63■■□□□ 1.85
IRF3-201ENST00000309877 TGFBRAP1Q8WUH2 860 aa26.63■■□□□ 1.85
IRF3-201ENST00000309877 STAG1Q8WVM7 1258 aa26.63■■□□□ 1.85
IRF3-201ENST00000309877 KRT23Q9C075 422 aa26.63■■□□□ 1.85
IRF3-201ENST00000309877 ARPP21Q9UBL0 812 aaPredicted RBP26.63■■□□□ 1.85
IRF3-201ENST00000309877 LAMA4Q16363 1823 aa26.63■■□□□ 1.85
IRF3-201ENST00000309877 MCM9Q9NXL9 1143 aa26.63■■□□□ 1.85
IRF3-201ENST00000309877 TPCN1Q9ULQ1 816 aa26.63■■□□□ 1.85
IRF3-201ENST00000309877 PRC1O43663 620 aa26.62■■□□□ 1.85
IRF3-201ENST00000309877 AMOTL1Q8IY63 956 aa26.62■■□□□ 1.85
IRF3-201ENST00000309877 STK11IPQ8N1F8 1099 aa26.62■■□□□ 1.85
IRF3-201ENST00000309877 INTS4Q96HW7 963 aaKnown RBP26.62■■□□□ 1.85
IRF3-201ENST00000309877 MRIQ9BWK5 157 aa26.62■■□□□ 1.85
IRF3-201ENST00000309877 TOMM22Q9NS69 142 aa26.62■■□□□ 1.85
IRF3-201ENST00000309877 ZNRF3Q9ULT6 936 aa26.62■■□□□ 1.85
IRF3-201ENST00000309877 NEDD4P46934 1319 aa26.62■■□□□ 1.85
IRF3-201ENST00000309877 B4E1Z4 1266 aa26.61■■□□□ 1.85
IRF3-201ENST00000309877 NFKBIEO00221 500 aa26.61■■□□□ 1.85
IRF3-201ENST00000309877 CRKP46108 304 aa26.61■■□□□ 1.85
IRF3-201ENST00000309877 RHBDL3P58872 404 aa26.61■■□□□ 1.85
IRF3-201ENST00000309877 SBK1Q52WX2 424 aa26.61■■□□□ 1.85
IRF3-201ENST00000309877 BRF1Q92994 677 aa26.61■■□□□ 1.85
IRF3-201ENST00000309877 CWC22Q9HCG8 908 aaKnown RBP26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms