RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 GOLGA8HP0CJ92 632 aa5.86□□□□□ -1.47
CAST-201ENST00000309190 RFX5P48382 616 aaPredicted RBP5.86□□□□□ -1.47
CAST-201ENST00000309190 NBPF9Q3BBW0 867 aa5.86□□□□□ -1.47
CAST-201ENST00000309190 ADGRA1Q86SQ6 560 aa5.86□□□□□ -1.47
CAST-201ENST00000309190 NIM1KQ8IY84 436 aa5.86□□□□□ -1.47
CAST-201ENST00000309190 MASTLQ96GX5 879 aa5.86□□□□□ -1.47
CAST-201ENST00000309190 ATRNO75882 1429 aa5.86□□□□□ -1.47
CAST-201ENST00000309190 SLIT3O75094 1523 aa5.86□□□□□ -1.47
CAST-201ENST00000309190 PKD1L3Q7Z443 1732 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 RPAP1Q9BWH6 1393 aaPredicted RBP5.85□□□□□ -1.47
CAST-201ENST00000309190 PEX10O60683 326 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 TAL1P17542 331 aaPredicted RBP5.85□□□□□ -1.47
CAST-201ENST00000309190 BRD2P25440 801 aaKnown RBP5.85□□□□□ -1.47
CAST-201ENST00000309190 CHMLP26374 656 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 CASP7P55210 303 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 PDE4CQ08493 712 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 MKRN4PQ13434 485 aaPredicted RBP5.85□□□□□ -1.47
CAST-201ENST00000309190 DGKZQ13574 1117 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 MAP1SQ66K74 1059 aaPredicted RBP5.85□□□□□ -1.47
CAST-201ENST00000309190 RALYLQ86SE5 291 aaKnown RBP5.85□□□□□ -1.47
CAST-201ENST00000309190 MTFR1LQ9H019 292 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 OSBPL3Q9H4L5 887 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 GRPEL1Q9HAV7 217 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 CD209Q9NNX6 404 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 BABAM1Q9NWV8 329 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 CHMP5Q9NZZ3 219 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 M0R2C6 588 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 ECE2O60344 883 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 NFIAQ12857 509 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 TAOK3Q9H2K8 898 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 COPRSQ9NQ92 184 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 USP40Q9NVE5 1235 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 RBM8AQ9Y5S9 174 aaKnown RBP5.85□□□□□ -1.47
CAST-201ENST00000309190 AOX1Q06278 1338 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 A0A0U1RQG5 324 aaPredicted RBP5.85□□□□□ -1.47
CAST-201ENST00000309190 TRAK2O60296 914 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 ZNF500O60304 480 aaPredicted RBP5.85□□□□□ -1.47
CAST-201ENST00000309190 ALDH1B1P30837 517 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 EPS15P42566 896 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 MRE11P49959 708 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 MECOMQ03112 1051 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 C9orf131Q5VYM1 1079 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 CCDC83Q8IWF9 413 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 TEX11Q8IYF3 940 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 RAB11FIP3O75154 756 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 PDE6AP16499 860 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 ZNF804AQ7Z570 1209 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 ZFPM1Q8IX07 1006 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 BRF1Q92994 677 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 LMBRD1Q9NUN5 540 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 PCDH10Q9P2E7 1040 aa5.85□□□□□ -1.47
CAST-201ENST00000309190 CASZ1Q86V15 1759 aa5.84□□□□□ -1.47
CAST-201ENST00000309190 C4AP0C0L4 1744 aa5.84□□□□□ -1.47
CAST-201ENST00000309190 C4BP0C0L5 1744 aa5.84□□□□□ -1.47
CAST-201ENST00000309190 CNTNAP4Q9C0A0 1308 aa5.84□□□□□ -1.47
CAST-201ENST00000309190 PSMD14O00487 310 aa5.84□□□□□ -1.47
CAST-201ENST00000309190 NPR1P16066 1061 aa5.84□□□□□ -1.47
CAST-201ENST00000309190 ZKSCAN1P17029 563 aaPredicted RBP5.84□□□□□ -1.47
CAST-201ENST00000309190 TM4SF1P30408 202 aa5.84□□□□□ -1.47
CAST-201ENST00000309190 ARFGEF2Q9Y6D5 1785 aa5.84□□□□□ -1.47
CAST-201ENST00000309190 UBE2Q2LH0YL09 131 aa5.84□□□□□ -1.47
CAST-201ENST00000309190 TRDNQ13061 729 aa5.84□□□□□ -1.47
CAST-201ENST00000309190 HS1BP3Q53T59 392 aa5.84□□□□□ -1.47
CAST-201ENST00000309190 RC3H1Q5TC82 1133 aaKnown RBP5.84□□□□□ -1.47
CAST-201ENST00000309190 HSCBQ8IWL3 235 aa5.84□□□□□ -1.47
CAST-201ENST00000309190 CNKSR1Q969H4 720 aa5.84□□□□□ -1.47
CAST-201ENST00000309190 YBX3P16989 372 aaKnown RBP eCLIP5.84□□□□□ -1.485e-8■■■□□ 18.2
CAST-201ENST00000309190 BTDP43251 543 aa5.84□□□□□ -1.48
CAST-201ENST00000309190 ZGPATQ8N5A5 531 aaKnown RBP5.84□□□□□ -1.48
CAST-201ENST00000309190 FLAD1Q8NFF5 587 aa5.84□□□□□ -1.48
CAST-201ENST00000309190 PI4K2BQ8TCG2 481 aa5.84□□□□□ -1.48
CAST-201ENST00000309190 SH3RF3Q8TEJ3 882 aaPredicted RBP5.84□□□□□ -1.48
CAST-201ENST00000309190 RNF25Q96BH1 459 aaPredicted RBP5.84□□□□□ -1.48
CAST-201ENST00000309190 HOMER2Q9NSB8 354 aa5.84□□□□□ -1.48
CAST-201ENST00000309190 BSDC1Q9NW68 430 aaPredicted RBP5.84□□□□□ -1.48
CAST-201ENST00000309190 MAGEB6P1A0A0J9YX57 407 aa5.83□□□□□ -1.48
CAST-201ENST00000309190 TSPY2A6NKD2 308 aa5.83□□□□□ -1.48
CAST-201ENST00000309190 APOBRQ0VD83 1088 aa5.83□□□□□ -1.48
CAST-201ENST00000309190 L1TD1Q5T7N2 865 aaKnown RBP5.83□□□□□ -1.48
CAST-201ENST00000309190 GPT2Q8TD30 523 aa5.83□□□□□ -1.48
CAST-201ENST00000309190 PRMT6Q96LA8 375 aaPredicted RBP5.83□□□□□ -1.48
CAST-201ENST00000309190 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.83□□□□□ -1.483e-10■□□□□ 9.2
CAST-201ENST00000309190 TMEM39BQ9GZU3 492 aa5.83□□□□□ -1.48
CAST-201ENST00000309190 CWC22Q9HCG8 908 aaKnown RBP5.83□□□□□ -1.48
CAST-201ENST00000309190 TAF1P21675 1872 aa5.83□□□□□ -1.48
CAST-201ENST00000309190 KIF1AQ12756 1690 aa5.83□□□□□ -1.48
CAST-201ENST00000309190 XDHP47989 1333 aa5.83□□□□□ -1.48
CAST-201ENST00000309190 ZNF213O14771 459 aa5.83□□□□□ -1.48
CAST-201ENST00000309190 FGAP02671 866 aa5.83□□□□□ -1.48
CAST-201ENST00000309190 CXCL9Q07325 125 aa5.83□□□□□ -1.48
CAST-201ENST00000309190 POLA2Q14181 598 aa5.83□□□□□ -1.48
CAST-201ENST00000309190 KLHL40Q2TBA0 621 aa5.83□□□□□ -1.48
CAST-201ENST00000309190 ESYT1Q9BSJ8 1104 aa5.83□□□□□ -1.48
CAST-201ENST00000309190 MYH14Q7Z406 1995 aaKnown RBP5.83□□□□□ -1.48
CAST-201ENST00000309190 USP17L3A6NCW0 530 aa5.83□□□□□ -1.48
CAST-201ENST00000309190 USP17L4A6NCW7 530 aa5.83□□□□□ -1.48
CAST-201ENST00000309190 MCCP23508 829 aa5.83□□□□□ -1.48
CAST-201ENST00000309190 GNL2Q13823 731 aaKnown RBP5.83□□□□□ -1.48
CAST-201ENST00000309190 DLGAP5Q15398 846 aa5.83□□□□□ -1.48
CAST-201ENST00000309190 USP17L1Q7RTZ2 530 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms