RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 PARD6BQ9BYG5 372 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 KCNH3Q9ULD8 1083 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 NFE2L3Q9Y4A8 694 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 ZRANB2O95218 330 aaKnown RBP eCLIP12.79□□□□□ -0.36
PTPN7-201ENST00000309017 ZNF827Q17R98 1081 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 KRT40Q6A162 431 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 AGXT2Q9BYV1 514 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 SLC52A2Q9HAB3 445 aa12.79□□□□□ -0.36
PTPN7-201ENST00000309017 JAKMIP3Q5VZ66 844 aa12.78□□□□□ -0.36
PTPN7-201ENST00000309017 PPFIBP1Q86W92 1011 aa12.78□□□□□ -0.36
PTPN7-201ENST00000309017 ZBTB3Q9H5J0 574 aa12.78□□□□□ -0.36
PTPN7-201ENST00000309017 RGPD8O14715 1765 aaPredicted RBP12.78□□□□□ -0.36
PTPN7-201ENST00000309017 VWA3AA6NCI4 1184 aa12.78□□□□□ -0.36
PTPN7-201ENST00000309017 SAFBQ15424 915 aaKnown RBP eCLIP12.78□□□□□ -0.36
PTPN7-201ENST00000309017 KIF4BQ2VIQ3 1234 aa12.78□□□□□ -0.36
PTPN7-201ENST00000309017 TOGARAM2Q6ZUX3 1019 aa12.78□□□□□ -0.36
PTPN7-201ENST00000309017 CCDC82Q8N4S0 544 aa12.78□□□□□ -0.36
PTPN7-201ENST00000309017 DHX58Q96C10 678 aa12.78□□□□□ -0.36
PTPN7-201ENST00000309017 N4BP2Q86UW6 1770 aaPredicted RBP12.78□□□□□ -0.36
PTPN7-201ENST00000309017 VPS18Q9P253 973 aa12.78□□□□□ -0.36
PTPN7-201ENST00000309017 SASH3O75995 380 aa12.77□□□□□ -0.36
PTPN7-201ENST00000309017 TBC1D8O95759 1140 aa12.77□□□□□ -0.36
PTPN7-201ENST00000309017 IARSP41252 1262 aaKnown RBP12.77□□□□□ -0.36
PTPN7-201ENST00000309017 CCDC57Q2TAC2 916 aa12.77□□□□□ -0.36
PTPN7-201ENST00000309017 LONRF3Q496Y0 759 aa12.77□□□□□ -0.36
PTPN7-201ENST00000309017 SLIT1O75093 1534 aa12.77□□□□□ -0.36
PTPN7-201ENST00000309017 KIF5CO60282 957 aa12.77□□□□□ -0.37
PTPN7-201ENST00000309017 HSP90B2PQ58FF3 399 aa12.77□□□□□ -0.37
PTPN7-201ENST00000309017 SPECC1LQ69YQ0 1117 aa12.77□□□□□ -0.37
PTPN7-201ENST00000309017 SHC4Q6S5L8 630 aa12.77□□□□□ -0.37
PTPN7-201ENST00000309017 FCHSD1Q86WN1 690 aa12.77□□□□□ -0.37
PTPN7-201ENST00000309017 CCDC102AQ96A19 550 aa12.77□□□□□ -0.37
PTPN7-201ENST00000309017 CWC25Q9NXE8 425 aaPredicted RBP12.77□□□□□ -0.37
PTPN7-201ENST00000309017 EYA2O00167 538 aa12.77□□□□□ -0.37
PTPN7-201ENST00000309017 CCDC175P0C221 793 aa12.77□□□□□ -0.37
PTPN7-201ENST00000309017 CABP4P57796 275 aa12.77□□□□□ -0.37
PTPN7-201ENST00000309017 MYL10Q9BUA6 226 aa12.77□□□□□ -0.37
PTPN7-201ENST00000309017 SLC26A6Q9BXS9 759 aa12.77□□□□□ -0.37
PTPN7-201ENST00000309017 DACH1Q9UI36 760 aa12.77□□□□□ -0.37
PTPN7-201ENST00000309017 ATP8B1O43520 1251 aa12.76□□□□□ -0.37
PTPN7-201ENST00000309017 CAPN2P17655 700 aa12.76□□□□□ -0.37
PTPN7-201ENST00000309017 CHMP4BP1P59074 171 aa12.76□□□□□ -0.37
PTPN7-201ENST00000309017 LONRF2Q1L5Z9 754 aa12.76□□□□□ -0.37
PTPN7-201ENST00000309017 RABL6Q3YEC7 729 aaPredicted RBP12.76□□□□□ -0.37
PTPN7-201ENST00000309017 PUS3Q9BZE2 481 aaKnown RBP12.76□□□□□ -0.37
PTPN7-201ENST00000309017 PALLDQ8WX93 1383 aa12.76□□□□□ -0.37
PTPN7-201ENST00000309017 GOLGA8AA7E2F4 631 aa12.76□□□□□ -0.37
PTPN7-201ENST00000309017 FOXN1O15353 648 aa12.76□□□□□ -0.37
PTPN7-201ENST00000309017 IRX2Q9BZI1 471 aaPredicted RBP12.76□□□□□ -0.37
PTPN7-201ENST00000309017 ERLIN1O75477 346 aa12.76□□□□□ -0.37
PTPN7-201ENST00000309017 SKIDA1Q1XH10 827 aa12.76□□□□□ -0.37
PTPN7-201ENST00000309017 ARHGEF25Q86VW2 580 aa12.76□□□□□ -0.37
PTPN7-201ENST00000309017 RABGGTAQ92696 567 aa12.76□□□□□ -0.37
PTPN7-201ENST00000309017 C19orf44Q9H6X5 657 aa12.76□□□□□ -0.37
PTPN7-201ENST00000309017 GPAA1O43292 621 aa12.75□□□□□ -0.37
PTPN7-201ENST00000309017 STX10O60499 249 aa12.75□□□□□ -0.37
PTPN7-201ENST00000309017 PHACTR2O75167 634 aa12.75□□□□□ -0.37
PTPN7-201ENST00000309017 IDH1O75874 414 aaKnown RBP12.75□□□□□ -0.37
PTPN7-201ENST00000309017 RHOXF2BP0C7M4 288 aa12.75□□□□□ -0.37
PTPN7-201ENST00000309017 RHOXF2Q9BQY4 288 aa12.75□□□□□ -0.37
PTPN7-201ENST00000309017 TUBE1Q9UJT0 475 aa12.75□□□□□ -0.37
PTPN7-201ENST00000309017 AXIN2Q9Y2T1 843 aa12.75□□□□□ -0.37
PTPN7-201ENST00000309017 POLR2DO15514 142 aaKnown RBP12.75□□□□□ -0.37
PTPN7-201ENST00000309017 EIF3JO75822 258 aaKnown RBP12.75□□□□□ -0.37
PTPN7-201ENST00000309017 STX17P56962 302 aa12.75□□□□□ -0.37
PTPN7-201ENST00000309017 RRP12Q5JTH9 1297 aaKnown RBP12.75□□□□□ -0.37
PTPN7-201ENST00000309017 ATG9AQ7Z3C6 839 aa12.75□□□□□ -0.37
PTPN7-201ENST00000309017 METTL16Q86W50 562 aaKnown RBP12.75□□□□□ -0.37
PTPN7-201ENST00000309017 PLBD2Q8NHP8 589 aa12.75□□□□□ -0.37
PTPN7-201ENST00000309017 RASSF4Q9H2L5 321 aa12.75□□□□□ -0.37
PTPN7-201ENST00000309017 ANGEL1Q9UNK9 670 aaKnown RBP12.75□□□□□ -0.37
PTPN7-201ENST00000309017 HPS5Q9UPZ3 1129 aa12.75□□□□□ -0.37
PTPN7-201ENST00000309017 MRFAP1Q9Y605 127 aa12.75□□□□□ -0.37
PTPN7-201ENST00000309017 ZBTB43O43298 467 aa12.75□□□□□ -0.37
PTPN7-201ENST00000309017 CUTAO60888 179 aa12.75□□□□□ -0.37
PTPN7-201ENST00000309017 ZFYP08048 801 aaPredicted RBP12.75□□□□□ -0.37
PTPN7-201ENST00000309017 MAP3K9P80192 1104 aa12.75□□□□□ -0.37
PTPN7-201ENST00000309017 ZNF569Q5MCW4 686 aa12.75□□□□□ -0.37
PTPN7-201ENST00000309017 GOLGA6L1Q8N7Z2 621 aa12.75□□□□□ -0.37
PTPN7-201ENST00000309017 KRI1Q8N9T8 703 aaKnown RBP12.75□□□□□ -0.37
PTPN7-201ENST00000309017 ADAM21Q9UKJ8 722 aa12.75□□□□□ -0.37
PTPN7-201ENST00000309017 ADORA1P30542 326 aa12.74□□□□□ -0.37
PTPN7-201ENST00000309017 TXLNAP40222 546 aa12.74□□□□□ -0.37
PTPN7-201ENST00000309017 ZAP70P43403 619 aa12.74□□□□□ -0.37
PTPN7-201ENST00000309017 PDE4BQ07343 736 aa12.74□□□□□ -0.37
PTPN7-201ENST00000309017 MTF1Q14872 753 aa12.74□□□□□ -0.37
PTPN7-201ENST00000309017 PI16Q6UXB8 463 aa12.74□□□□□ -0.37
PTPN7-201ENST00000309017 PUS7LQ9H0K6 701 aaKnown RBP12.74□□□□□ -0.37
PTPN7-201ENST00000309017 RAI14Q9P0K7 980 aa12.74□□□□□ -0.37
PTPN7-201ENST00000309017 B4E1Z4 1266 aa12.74□□□□□ -0.37
PTPN7-201ENST00000309017 FANCGO15287 622 aa12.74□□□□□ -0.37
PTPN7-201ENST00000309017 POSTNQ15063 836 aa12.74□□□□□ -0.37
PTPN7-201ENST00000309017 MB21D2Q8IYB1 491 aaPredicted RBP12.74□□□□□ -0.37
PTPN7-201ENST00000309017 GRAMD1CQ8IYS0 662 aa12.74□□□□□ -0.37
PTPN7-201ENST00000309017 IFNL2Q8IZJ0 200 aa12.74□□□□□ -0.37
PTPN7-201ENST00000309017 ORAI2Q96SN7 254 aa12.74□□□□□ -0.37
PTPN7-201ENST00000309017 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.74□□□□□ -0.376e-7■■■■□ 19.6
PTPN7-201ENST00000309017 PDE11AQ9HCR9 933 aa12.74□□□□□ -0.37
PTPN7-201ENST00000309017 AKR1B15C9JRZ8 316 aaPredicted RBP12.74□□□□□ -0.37
PTPN7-201ENST00000309017 PPP6R2O75170 966 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms