RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 NCBP1Q09161 790 aaKnown RBP17.54■□□□□ 0.4
CSDC2-201ENST00000306149 KRT40Q6A162 431 aa17.54■□□□□ 0.4
CSDC2-201ENST00000306149 APOA5Q6Q788 366 aa17.54■□□□□ 0.4
CSDC2-201ENST00000306149 NFXL1Q6ZNB6 911 aa17.54■□□□□ 0.4
CSDC2-201ENST00000306149 VPS37DQ86XT2 251 aa17.54■□□□□ 0.4
CSDC2-201ENST00000306149 A0A0G2JS52 829 aa17.54■□□□□ 0.4
CSDC2-201ENST00000306149 SH2B2O14492 632 aaPredicted RBP17.54■□□□□ 0.4
CSDC2-201ENST00000306149 SMC2O95347 1197 aa17.54■□□□□ 0.4
CSDC2-201ENST00000306149 CYP19A1P11511 503 aaPredicted RBP17.54■□□□□ 0.4
CSDC2-201ENST00000306149 CCZ1BP86790 482 aa17.54■□□□□ 0.4
CSDC2-201ENST00000306149 CCZ1P86791 482 aaPredicted RBP17.54■□□□□ 0.4
CSDC2-201ENST00000306149 GNL2Q13823 731 aaKnown RBP17.54■□□□□ 0.4
CSDC2-201ENST00000306149 UTP14CQ5TAP6 766 aaKnown RBP17.54■□□□□ 0.4
CSDC2-201ENST00000306149 CLIC6Q96NY7 704 aa17.54■□□□□ 0.4
CSDC2-201ENST00000306149 C4AP0C0L4 1744 aa17.54■□□□□ 0.4
CSDC2-201ENST00000306149 C4BP0C0L5 1744 aa17.54■□□□□ 0.4
CSDC2-201ENST00000306149 SPDYE4A6NLX3 237 aa17.53■□□□□ 0.4
CSDC2-201ENST00000306149 AIDAQ96BJ3 306 aa17.53■□□□□ 0.4
CSDC2-201ENST00000306149 XPO4Q9C0E2 1151 aaKnown RBP17.53■□□□□ 0.4
CSDC2-201ENST00000306149 IFNKQ9P0W0 207 aa17.53■□□□□ 0.4
CSDC2-201ENST00000306149 ZMYM6O95789 1325 aa17.53■□□□□ 0.4
CSDC2-201ENST00000306149 CDHR2Q9BYE9 1310 aa17.53■□□□□ 0.4
CSDC2-201ENST00000306149 DMTNQ08495 405 aa17.53■□□□□ 0.4
CSDC2-201ENST00000306149 CEP135Q66GS9 1140 aa17.53■□□□□ 0.4
CSDC2-201ENST00000306149 STRBPQ96SI9 672 aaKnown RBP17.52■□□□□ 0.4
CSDC2-201ENST00000306149 TACC3Q9Y6A5 838 aa17.52■□□□□ 0.4
CSDC2-201ENST00000306149 UBN2Q6ZU65 1347 aa17.52■□□□□ 0.4
CSDC2-201ENST00000306149 RANBP6O60518 1105 aaKnown RBP17.52■□□□□ 0.4
CSDC2-201ENST00000306149 ZSCAN20P17040 1043 aaPredicted RBP17.52■□□□□ 0.4
CSDC2-201ENST00000306149 SLC39A14Q15043 492 aa17.52■□□□□ 0.4
CSDC2-201ENST00000306149 TTF1Q15361 905 aaPredicted RBP17.52■□□□□ 0.4
CSDC2-201ENST00000306149 UBE3CQ15386 1083 aa17.52■□□□□ 0.4
CSDC2-201ENST00000306149 CCDC82Q8N4S0 544 aa17.52■□□□□ 0.4
CSDC2-201ENST00000306149 ZNF335Q9H4Z2 1342 aaPredicted RBP17.52■□□□□ 0.39
CSDC2-201ENST00000306149 XIRP1Q702N8 1843 aaKnown RBP17.52■□□□□ 0.39
CSDC2-201ENST00000306149 TCRBV5S4A2TA0A5A2 114 aa17.51■□□□□ 0.39
CSDC2-201ENST00000306149 CMA1P23946 247 aa17.51■□□□□ 0.39
CSDC2-201ENST00000306149 U2AF2P26368 475 aaKnown RBP eCLIP17.51■□□□□ 0.39
CSDC2-201ENST00000306149 LMOD1P29536 600 aaPredicted RBP17.51■□□□□ 0.39
CSDC2-201ENST00000306149 TMEM67Q5HYA8 995 aa17.51■□□□□ 0.39
CSDC2-201ENST00000306149 DZIP3Q86Y13 1208 aaKnown RBP17.51■□□□□ 0.39
CSDC2-201ENST00000306149 MAGEB6Q8N7X4 407 aa17.51■□□□□ 0.39
CSDC2-201ENST00000306149 CCDC112Q8NEF3 446 aa17.51■□□□□ 0.39
CSDC2-201ENST00000306149 IGDCC4Q8TDY8 1250 aa17.51■□□□□ 0.39
CSDC2-201ENST00000306149 ZKSCAN3Q9BRR0 538 aa17.51■□□□□ 0.39
CSDC2-201ENST00000306149 ARMT1Q9H993 441 aa17.51■□□□□ 0.39
CSDC2-201ENST00000306149 ZBTB43O43298 467 aa17.51■□□□□ 0.39
CSDC2-201ENST00000306149 PRKAB2O43741 272 aa17.51■□□□□ 0.39
CSDC2-201ENST00000306149 PDE8AO60658 829 aa17.51■□□□□ 0.39
CSDC2-201ENST00000306149 TMC6Q7Z403 805 aa17.51■□□□□ 0.39
CSDC2-201ENST00000306149 EPB41L4AQ9HCS5 686 aaPredicted RBP17.51■□□□□ 0.39
CSDC2-201ENST00000306149 ZSWIM5Q9P217 1185 aa17.51■□□□□ 0.39
CSDC2-201ENST00000306149 ABCC12Q96J65 1359 aa17.51■□□□□ 0.39
CSDC2-201ENST00000306149 MBD4O95243 580 aa17.51■□□□□ 0.39
CSDC2-201ENST00000306149 PTPN21Q16825 1174 aa17.51■□□□□ 0.39
CSDC2-201ENST00000306149 RRP12Q5JTH9 1297 aaKnown RBP17.51■□□□□ 0.39
CSDC2-201ENST00000306149 SHC4Q6S5L8 630 aa17.51■□□□□ 0.39
CSDC2-201ENST00000306149 SEC31BQ9NQW1 1179 aa17.51■□□□□ 0.39
CSDC2-201ENST00000306149 FAM217BQ9NTX9 383 aaPredicted RBP17.51■□□□□ 0.39
CSDC2-201ENST00000306149 GOLGA8AA7E2F4 631 aa17.5■□□□□ 0.39
CSDC2-201ENST00000306149 ATP1A3P13637 1013 aa17.5■□□□□ 0.39
CSDC2-201ENST00000306149 IARSP41252 1262 aaKnown RBP17.5■□□□□ 0.39
CSDC2-201ENST00000306149 SYKP43405 635 aa17.5■□□□□ 0.39
CSDC2-201ENST00000306149 PTPN14Q15678 1187 aa17.5■□□□□ 0.39
CSDC2-201ENST00000306149 SPECC1Q5M775 1068 aa17.5■□□□□ 0.39
CSDC2-201ENST00000306149 CMTR1Q8N1G2 835 aaKnown RBP17.5■□□□□ 0.39
CSDC2-201ENST00000306149 SLC26A6Q9BXS9 759 aa17.5■□□□□ 0.39
CSDC2-201ENST00000306149 LY9Q9HBG7 655 aa17.5■□□□□ 0.39
CSDC2-201ENST00000306149 TOMM22Q9NS69 142 aa17.5■□□□□ 0.39
CSDC2-201ENST00000306149 KCND1Q9NSA2 647 aa17.5■□□□□ 0.39
CSDC2-201ENST00000306149 ECM29Q5VYK3 1845 aa17.5■□□□□ 0.39
CSDC2-201ENST00000306149 NLRP12P59046 1061 aa17.5■□□□□ 0.39
CSDC2-201ENST00000306149 PNOCQ13519 176 aa17.5■□□□□ 0.39
CSDC2-201ENST00000306149 RASGRF1Q13972 1273 aa17.5■□□□□ 0.39
CSDC2-201ENST00000306149 NYAP1Q6ZVC0 841 aa17.5■□□□□ 0.39
CSDC2-201ENST00000306149 IFNL3Q8IZI9 196 aa17.5■□□□□ 0.39
CSDC2-201ENST00000306149 SPATA5Q8NB90 893 aa17.5■□□□□ 0.39
CSDC2-201ENST00000306149 FEZ1Q99689 392 aa17.5■□□□□ 0.39
CSDC2-201ENST00000306149 WDR19Q8NEZ3 1342 aa17.49■□□□□ 0.39
CSDC2-201ENST00000306149 IFIT3O14879 490 aaKnown RBP17.49■□□□□ 0.39
CSDC2-201ENST00000306149 NCAPHQ15003 741 aa17.49■□□□□ 0.39
CSDC2-201ENST00000306149 NTRK3Q16288 839 aa17.49■□□□□ 0.39
CSDC2-201ENST00000306149 NAPBQ9H115 298 aa17.49■□□□□ 0.39
CSDC2-201ENST00000306149 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.49■□□□□ 0.39
CSDC2-201ENST00000306149 V9GYY5 206 aaPredicted RBP17.49■□□□□ 0.39
CSDC2-201ENST00000306149 ARID4AP29374 1257 aaPredicted RBP17.49■□□□□ 0.39
CSDC2-201ENST00000306149 GUCY1A2P33402 732 aa17.49■□□□□ 0.39
CSDC2-201ENST00000306149 PUM3Q15397 648 aaKnown RBP17.49■□□□□ 0.39
CSDC2-201ENST00000306149 ZNF512BQ96KM6 892 aaPredicted RBP17.49■□□□□ 0.39
CSDC2-201ENST00000306149 BPIFA3Q9BQP9 254 aa17.49■□□□□ 0.39
CSDC2-201ENST00000306149 PTPAQ15257 358 aa17.48■□□□□ 0.39
CSDC2-201ENST00000306149 LPIN2Q92539 896 aa17.48■□□□□ 0.39
CSDC2-201ENST00000306149 CDKL5O76039 1030 aa17.48■□□□□ 0.39
CSDC2-201ENST00000306149 GSDMDP57764 484 aa17.48■□□□□ 0.39
CSDC2-201ENST00000306149 ARMCX5Q6P1M9 558 aa17.48■□□□□ 0.39
CSDC2-201ENST00000306149 CPLX2Q6PUV4 134 aaKnown RBP17.48■□□□□ 0.39
CSDC2-201ENST00000306149 CCAR2Q8N163 923 aaKnown RBP17.48■□□□□ 0.39
CSDC2-201ENST00000306149 IQSEC3Q9UPP2 1182 aaPredicted RBP17.48■□□□□ 0.39
CSDC2-201ENST00000306149 MIGA1Q8NAN2 632 aa17.47■□□□□ 0.39
CSDC2-201ENST00000306149 MAP3K14Q99558 947 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms