RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 KIAA1958Q8N8K9 716 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 PRPF38AQ8NAV1 312 aaKnown RBP5.44□□□□□ -1.54
ZNF560-201ENST00000301480 SLC4A9Q96Q91 983 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 YIPF2Q9BWQ6 316 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 NUDCQ9Y266 331 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 KIF3AQ9Y496 699 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 ANKRD18BA2A2Z9 1011 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 CCDC66A2RUB6 948 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 GOLGA6L22H0YM25 854 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 ENPP1P22413 925 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 STIP1P31948 543 aaKnown RBP5.44□□□□□ -1.54
ZNF560-201ENST00000301480 FAM160A1Q05DH4 1040 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 COL19A1Q14993 1142 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 PLEKHG6Q3KR16 790 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 ALKBH2Q6NS38 261 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 INTS5Q6P9B9 1019 aaKnown RBP5.44□□□□□ -1.54
ZNF560-201ENST00000301480 CTR9Q6PD62 1173 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 NFATC2IPQ8NCF5 419 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 CENPOQ9BU64 300 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 SPC25Q9HBM1 224 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 TMOD4Q9NZQ9 345 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 ARFGEF1Q9Y6D6 1849 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 KIAA1551Q9HCM1 1747 aa5.44□□□□□ -1.54
ZNF560-201ENST00000301480 KIF7Q2M1P5 1343 aa5.43□□□□□ -1.54
ZNF560-201ENST00000301480 FCHSD2O94868 740 aa5.43□□□□□ -1.54
ZNF560-201ENST00000301480 CYP19A1P11511 503 aaPredicted RBP5.43□□□□□ -1.54
ZNF560-201ENST00000301480 IL6STP40189 918 aaPredicted RBP5.43□□□□□ -1.54
ZNF560-201ENST00000301480 TOMM20Q15388 145 aa5.43□□□□□ -1.54
ZNF560-201ENST00000301480 SUGP1Q8IWZ8 645 aaKnown RBP5.43□□□□□ -1.54
ZNF560-201ENST00000301480 CCAR1Q8IX12 1150 aaKnown RBP5.43□□□□□ -1.54
ZNF560-201ENST00000301480 VMP1Q96GC9 406 aa5.43□□□□□ -1.54
ZNF560-201ENST00000301480 PICK1Q9NRD5 415 aa5.43□□□□□ -1.54
ZNF560-201ENST00000301480 TRMT1Q9NXH9 659 aaKnown RBP5.43□□□□□ -1.54
ZNF560-201ENST00000301480 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.43□□□□□ -1.54
ZNF560-201ENST00000301480 LTBP3Q9NS15 1303 aa5.43□□□□□ -1.54
ZNF560-201ENST00000301480 TLDC2A0PJX2 215 aa5.43□□□□□ -1.54
ZNF560-201ENST00000301480 KINO60870 393 aaKnown RBP5.43□□□□□ -1.54
ZNF560-201ENST00000301480 DPEP1P16444 411 aa5.43□□□□□ -1.54
ZNF560-201ENST00000301480 SMARCA1P28370 1054 aa5.43□□□□□ -1.54
ZNF560-201ENST00000301480 CBX1P83916 185 aa5.43□□□□□ -1.54
ZNF560-201ENST00000301480 SIM2Q14190 667 aaPredicted RBP5.43□□□□□ -1.54
ZNF560-201ENST00000301480 CCDC93Q567U6 631 aa5.43□□□□□ -1.54
ZNF560-201ENST00000301480 LMNTD2Q8IXW0 634 aa5.43□□□□□ -1.54
ZNF560-201ENST00000301480 TTC5Q8N0Z6 440 aa5.43□□□□□ -1.54
ZNF560-201ENST00000301480 SAMD3Q8N6K7 520 aa5.43□□□□□ -1.54
ZNF560-201ENST00000301480 C17orf50Q8WW18 174 aa5.43□□□□□ -1.54
ZNF560-201ENST00000301480 CHST12Q9NRB3 414 aa5.43□□□□□ -1.54
ZNF560-201ENST00000301480 NRXN2Q9P2S2 1712 aa5.43□□□□□ -1.54
ZNF560-201ENST00000301480 RSPH14Q9UHP6 348 aa5.43□□□□□ -1.54
ZNF560-201ENST00000301480 TJP1Q07157 1748 aa5.43□□□□□ -1.54
ZNF560-201ENST00000301480 GNAT3A8MTJ3 354 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 POLRMTO00411 1230 aaKnown RBP5.42□□□□□ -1.54
ZNF560-201ENST00000301480 SLC34A2O95436 690 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 KCNA3P22001 575 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 PDE4DQ08499 809 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 SDE2Q6IQ49 451 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 ZNF771Q7L3S4 317 aaPredicted RBP5.42□□□□□ -1.54
ZNF560-201ENST00000301480 AMIGO3Q86WK7 504 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 TBC1D2Q9BYX2 928 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 TOMM22Q9NS69 142 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 BLOC1S6Q9UL45 172 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 NOL7Q9UMY1 257 aaKnown RBP5.42□□□□□ -1.54
ZNF560-201ENST00000301480 BCS1LQ9Y276 419 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 AKAP2Q9Y2D5 859 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 KCPQ6ZWJ8 1503 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 COL15A1P39059 1388 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 CEMIPQ8WUJ3 1361 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 COL3A1P02461 1466 aaPredicted RBP5.42□□□□□ -1.54
ZNF560-201ENST00000301480 MYCLP1P12525 358 aaPredicted RBP5.42□□□□□ -1.54
ZNF560-201ENST00000301480 ALDH1B1P30837 517 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 TEFQ10587 303 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 ENOX2Q16206 610 aaKnown RBP5.42□□□□□ -1.54
ZNF560-201ENST00000301480 GJC2Q5T442 439 aaPredicted RBP5.42□□□□□ -1.54
ZNF560-201ENST00000301480 ARHGAP27Q6ZUM4 889 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 RELL1Q8IUW5 271 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 C16orf71Q8IYS4 520 aaPredicted RBP5.42□□□□□ -1.54
ZNF560-201ENST00000301480 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.42□□□□□ -1.54
ZNF560-201ENST00000301480 GIPC2Q8TF65 315 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 TEKT1Q969V4 418 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 BRIP1Q9BX63 1249 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 ZHX3Q9H4I2 956 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 AS3MTQ9HBK9 375 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 HEG1Q9ULI3 1381 aa5.42□□□□□ -1.54
ZNF560-201ENST00000301480 PRSS47A8MTI9 375 aa5.41□□□□□ -1.54
ZNF560-201ENST00000301480 H0YIN7 160 aa5.41□□□□□ -1.54
ZNF560-201ENST00000301480 LDHAP00338 332 aaKnown RBP5.41□□□□□ -1.54
ZNF560-201ENST00000301480 TAGLNQ01995 201 aaKnown RBP5.41□□□□□ -1.54
ZNF560-201ENST00000301480 NFKBIBQ15653 356 aa5.41□□□□□ -1.54
ZNF560-201ENST00000301480 CCDC144BQ3MJ40 725 aa5.41□□□□□ -1.54
ZNF560-201ENST00000301480 CCDC174Q6PII3 467 aa5.41□□□□□ -1.54
ZNF560-201ENST00000301480 CCDC73Q6ZRK6 1079 aa5.41□□□□□ -1.54
ZNF560-201ENST00000301480 TSR2Q969E8 191 aaKnown RBP5.41□□□□□ -1.54
ZNF560-201ENST00000301480 SLC7A5P2Q9GIP4 190 aa5.41□□□□□ -1.54
ZNF560-201ENST00000301480 TMX1Q9H3N1 280 aa5.41□□□□□ -1.54
ZNF560-201ENST00000301480 BABAM1Q9NWV8 329 aa5.41□□□□□ -1.54
ZNF560-201ENST00000301480 ZNF652Q9Y2D9 606 aa5.41□□□□□ -1.54
ZNF560-201ENST00000301480 UBR2Q8IWV8 1755 aa5.41□□□□□ -1.54
ZNF560-201ENST00000301480 BRCA1P38398 1863 aaKnown RBP5.41□□□□□ -1.54
ZNF560-201ENST00000301480 CCDC196A0A1B0GTZ2 297 aa5.41□□□□□ -1.54
ZNF560-201ENST00000301480 PTCD1O75127 700 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms