RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 AATFQ9NY61 560 aaKnown RBP eCLIP18.56■□□□□ 0.56
HERPUD1-201ENST00000300302 C10orf71Q711Q0 1435 aa18.56■□□□□ 0.56
HERPUD1-201ENST00000300302 FAM205AQ6ZU69 1335 aa18.55■□□□□ 0.56
HERPUD1-201ENST00000300302 G3V3G9 751 aa18.55■□□□□ 0.56
HERPUD1-201ENST00000300302 PRC1O43663 620 aa18.55■□□□□ 0.56
HERPUD1-201ENST00000300302 MCM4P33991 863 aa18.55■□□□□ 0.56
HERPUD1-201ENST00000300302 DCAF8Q5TAQ9 597 aa18.55■□□□□ 0.56
HERPUD1-201ENST00000300302 OLFM4Q6UX06 510 aa18.55■□□□□ 0.56
HERPUD1-201ENST00000300302 CERS3Q8IU89 383 aa18.55■□□□□ 0.56
HERPUD1-201ENST00000300302 NECAB1Q8N987 351 aa18.55■□□□□ 0.56
HERPUD1-201ENST00000300302 CHMP4CQ96CF2 233 aa18.55■□□□□ 0.56
HERPUD1-201ENST00000300302 BAG3O95817 575 aa18.54■□□□□ 0.56
HERPUD1-201ENST00000300302 AKNAD1Q5T1N1 836 aa18.54■□□□□ 0.56
HERPUD1-201ENST00000300302 CC2D2BQ6DHV5 1058 aa18.54■□□□□ 0.56
HERPUD1-201ENST00000300302 MFSD6Q6ZSS7 791 aa18.54■□□□□ 0.56
HERPUD1-201ENST00000300302 CHST3Q7LGC8 479 aa18.54■□□□□ 0.56
HERPUD1-201ENST00000300302 SLF2Q8IX21 1173 aa18.54■□□□□ 0.56
HERPUD1-201ENST00000300302 KRT23Q9C075 422 aa18.54■□□□□ 0.56
HERPUD1-201ENST00000300302 RNF41Q9H4P4 317 aaPredicted RBP18.54■□□□□ 0.56
HERPUD1-201ENST00000300302 TIAM2Q8IVF5 1701 aa18.54■□□□□ 0.56
HERPUD1-201ENST00000300302 POLD1P28340 1107 aa18.54■□□□□ 0.56
HERPUD1-201ENST00000300302 STK3Q13188 491 aa18.54■□□□□ 0.56
HERPUD1-201ENST00000300302 PKP1Q13835 747 aa18.54■□□□□ 0.56
HERPUD1-201ENST00000300302 MFSD14BQ5SR56 506 aa18.54■□□□□ 0.56
HERPUD1-201ENST00000300302 STAG1Q8WVM7 1258 aa18.54■□□□□ 0.56
HERPUD1-201ENST00000300302 GTF3C6Q969F1 213 aa18.54■□□□□ 0.56
HERPUD1-201ENST00000300302 ATP8A2Q9NTI2 1148 aa18.54■□□□□ 0.56
HERPUD1-201ENST00000300302 SLX4Q8IY92 1834 aa18.53■□□□□ 0.56
HERPUD1-201ENST00000300302 DDX11L8A8MPP1 907 aa18.53■□□□□ 0.56
HERPUD1-201ENST00000300302 PDIA4P13667 645 aaKnown RBP18.53■□□□□ 0.56
HERPUD1-201ENST00000300302 CTDSPL2Q05D32 466 aa18.53■□□□□ 0.56
HERPUD1-201ENST00000300302 PPARAQ07869 468 aa18.53■□□□□ 0.56
HERPUD1-201ENST00000300302 ST3GAL1Q11201 340 aa18.53■□□□□ 0.56
HERPUD1-201ENST00000300302 CLEC17AQ6ZS10 378 aa18.53■□□□□ 0.56
HERPUD1-201ENST00000300302 ZNF274Q96GC6 653 aaPredicted RBP18.53■□□□□ 0.56
HERPUD1-201ENST00000300302 ANAPC4Q9UJX5 808 aa18.53■□□□□ 0.56
HERPUD1-201ENST00000300302 CHD4Q14839 1912 aa18.52■□□□□ 0.56
HERPUD1-201ENST00000300302 WDR33Q9C0J8 1336 aaKnown RBP18.52■□□□□ 0.56
HERPUD1-201ENST00000300302 GJB2P29033 226 aa18.52■□□□□ 0.56
HERPUD1-201ENST00000300302 APOBRQ0VD83 1088 aa18.52■□□□□ 0.56
HERPUD1-201ENST00000300302 SUGT1Q9Y2Z0 365 aa18.52■□□□□ 0.56
HERPUD1-201ENST00000300302 MROH7-TTC4A0A0A0MT08 1334 aa18.52■□□□□ 0.55
HERPUD1-201ENST00000300302 NEDD4P46934 1319 aa18.52■□□□□ 0.55
HERPUD1-201ENST00000300302 B4E1Z4 1266 aa18.52■□□□□ 0.55
HERPUD1-201ENST00000300302 PFKFB2O60825 505 aa18.52■□□□□ 0.55
HERPUD1-201ENST00000300302 BRD1O95696 1058 aa18.52■□□□□ 0.55
HERPUD1-201ENST00000300302 EVCP57679 992 aa18.52■□□□□ 0.55
HERPUD1-201ENST00000300302 GTF2IP78347 998 aa18.52■□□□□ 0.55
HERPUD1-201ENST00000300302 GRIPAP1Q4V328 841 aa18.52■□□□□ 0.55
HERPUD1-201ENST00000300302 TMEM87BQ96K49 555 aa18.52■□□□□ 0.55
HERPUD1-201ENST00000300302 MINDY4BA8MYZ0 360 aa18.51■□□□□ 0.55
HERPUD1-201ENST00000300302 GOLGA6L22H0YM25 854 aa18.51■□□□□ 0.55
HERPUD1-201ENST00000300302 PTMSP20962 102 aa18.51■□□□□ 0.55
HERPUD1-201ENST00000300302 ANTXR2P58335 489 aa18.51■□□□□ 0.55
HERPUD1-201ENST00000300302 RTFDC1Q9BY42 306 aaPredicted RBP18.51■□□□□ 0.55
HERPUD1-201ENST00000300302 ZNF219Q9P2Y4 722 aaPredicted RBP18.51■□□□□ 0.55
HERPUD1-201ENST00000300302 ZDHHC9Q9Y397 364 aa18.51■□□□□ 0.55
HERPUD1-201ENST00000300302 PCP11498 1178 aaKnown RBP18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 PPP4CP60510 307 aa18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 GRIK5Q16478 980 aa18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 PODNQ7Z5L7 613 aa18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 SUPT20HQ8NEM7 779 aa18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 C7orf43Q8WVR3 580 aa18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 LLPHQ9BRT6 129 aaKnown RBP18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 DLEC1Q9Y238 1755 aa18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 DPEP1P16444 411 aa18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 PDCP20941 246 aa18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 DIXDC1Q155Q3 683 aa18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 DOK7Q18PE1 504 aa18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 TTLL6Q8N841 843 aa18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 FBXW7Q969H0 707 aa18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 SGIP1Q9BQI5 828 aa18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 DCP1AQ9NPI6 582 aaPredicted RBP18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 TOMM22Q9NS69 142 aa18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 ARPP21Q9UBL0 812 aaPredicted RBP18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 NAP1L2Q9ULW6 460 aaPredicted RBP18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 ANGEL1Q9UNK9 670 aaKnown RBP18.5■□□□□ 0.55
HERPUD1-201ENST00000300302 STX6O43752 255 aa18.49■□□□□ 0.55
HERPUD1-201ENST00000300302 PLCG2P16885 1265 aa18.49■□□□□ 0.55
HERPUD1-201ENST00000300302 PDIA3P30101 505 aaKnown RBP18.49■□□□□ 0.55
HERPUD1-201ENST00000300302 SCRN1Q12765 414 aa18.49■□□□□ 0.55
HERPUD1-201ENST00000300302 CTR9Q6PD62 1173 aa18.49■□□□□ 0.55
HERPUD1-201ENST00000300302 CYB5R4Q7L1T6 521 aa18.49■□□□□ 0.55
HERPUD1-201ENST00000300302 FAM163AQ96GL9 167 aaPredicted RBP18.49■□□□□ 0.55
HERPUD1-201ENST00000300302 PPP1R1BQ9UD71 204 aaPredicted RBP18.49■□□□□ 0.55
HERPUD1-201ENST00000300302 MYH2Q9UKX2 1941 aa18.49■□□□□ 0.55
HERPUD1-201ENST00000300302 KDM4AO75164 1064 aa18.48■□□□□ 0.55
HERPUD1-201ENST00000300302 BAG4O95429 457 aaKnown RBP18.48■□□□□ 0.55
HERPUD1-201ENST00000300302 SLC3A2P08195 630 aaKnown RBP18.48■□□□□ 0.55
HERPUD1-201ENST00000300302 SYT1P21579 422 aa18.48■□□□□ 0.55
HERPUD1-201ENST00000300302 PTGER2P43116 358 aa18.48■□□□□ 0.55
HERPUD1-201ENST00000300302 USP5P45974 858 aa18.48■□□□□ 0.55
HERPUD1-201ENST00000300302 SART3Q15020 963 aaKnown RBP18.48■□□□□ 0.55
HERPUD1-201ENST00000300302 MTA3Q9BTC8 594 aa18.48■□□□□ 0.55
HERPUD1-201ENST00000300302 GPR75-ASB3A0A0A6YYF3 556 aa18.48■□□□□ 0.55
HERPUD1-201ENST00000300302 USP17L12C9JPN9 530 aa18.48■□□□□ 0.55
HERPUD1-201ENST00000300302 USP17L21D6R901 530 aa18.48■□□□□ 0.55
HERPUD1-201ENST00000300302 DHX16O60231 1041 aaKnown RBP18.48■□□□□ 0.55
HERPUD1-201ENST00000300302 KCNA3P22001 575 aa18.48■□□□□ 0.55
HERPUD1-201ENST00000300302 SBK1Q52WX2 424 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms