RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 USH1CQ9Y6N9 552 aa16.62■□□□□ 0.25
SCN3B-201ENST00000299333 SLC4A4Q9Y6R1 1079 aa16.62■□□□□ 0.25
SCN3B-201ENST00000299333 ELP1O95163 1332 aa16.62■□□□□ 0.25
SCN3B-201ENST00000299333 MYCNP04198 464 aaPredicted RBP16.62■□□□□ 0.25
SCN3B-201ENST00000299333 VPS41P49754 854 aa16.62■□□□□ 0.25
SCN3B-201ENST00000299333 GNGT1P63211 74 aa16.62■□□□□ 0.25
SCN3B-201ENST00000299333 SECISBP2LQ93073 1101 aaKnown RBP16.62■□□□□ 0.25
SCN3B-201ENST00000299333 SH3BP5O60239 455 aa16.62■□□□□ 0.25
SCN3B-201ENST00000299333 TBC1D8BQ0IIM8 1120 aa16.62■□□□□ 0.25
SCN3B-201ENST00000299333 BRAPQ7Z569 592 aa16.62■□□□□ 0.25
SCN3B-201ENST00000299333 TOPBP1Q92547 1522 aa16.61■□□□□ 0.25
SCN3B-201ENST00000299333 COG7P83436 770 aa16.61■□□□□ 0.25
SCN3B-201ENST00000299333 CYB5RLQ6IPT4 315 aa16.61■□□□□ 0.25
SCN3B-201ENST00000299333 PIK3R4Q99570 1358 aa16.61■□□□□ 0.25
SCN3B-201ENST00000299333 BAG3O95817 575 aa16.61■□□□□ 0.25
SCN3B-201ENST00000299333 CREB3L3Q68CJ9 461 aa16.61■□□□□ 0.25
SCN3B-201ENST00000299333 IQUBQ8NA54 791 aa16.61■□□□□ 0.25
SCN3B-201ENST00000299333 ANKRD44Q8N8A2 993 aa16.61■□□□□ 0.25
SCN3B-201ENST00000299333 MGARPQ8TDB4 240 aa16.61■□□□□ 0.25
SCN3B-201ENST00000299333 CRNKL1Q9BZJ0 848 aaKnown RBP16.61■□□□□ 0.25
SCN3B-201ENST00000299333 ZRANB1Q9UGI0 708 aa16.61■□□□□ 0.25
SCN3B-201ENST00000299333 CALM1P0DP23 149 aa16.6■□□□□ 0.25
SCN3B-201ENST00000299333 CALM2P0DP24 149 aa16.6■□□□□ 0.25
SCN3B-201ENST00000299333 CALM3P0DP25 149 aa16.6■□□□□ 0.25
SCN3B-201ENST00000299333 PAK2Q13177 524 aa16.6■□□□□ 0.25
SCN3B-201ENST00000299333 RASA3Q14644 834 aa16.6■□□□□ 0.25
SCN3B-201ENST00000299333 PLS1Q14651 629 aa16.6■□□□□ 0.25
SCN3B-201ENST00000299333 MAK16Q9BXY0 300 aaKnown RBP16.6■□□□□ 0.25
SCN3B-201ENST00000299333 CRCPO75575 148 aa16.6■□□□□ 0.25
SCN3B-201ENST00000299333 SH3BGRP55822 239 aaPredicted RBP16.6■□□□□ 0.25
SCN3B-201ENST00000299333 TRIM14Q14142 442 aa16.6■□□□□ 0.25
SCN3B-201ENST00000299333 LRRC23Q53EV4 343 aaPredicted RBP16.6■□□□□ 0.25
SCN3B-201ENST00000299333 PLEKHA4Q9H4M7 779 aa16.6■□□□□ 0.25
SCN3B-201ENST00000299333 OPHN1O60890 802 aa16.6■□□□□ 0.25
SCN3B-201ENST00000299333 CCT6BQ92526 530 aa16.6■□□□□ 0.25
SCN3B-201ENST00000299333 HS2ST1Q7LGA3 356 aa16.6■□□□□ 0.25
SCN3B-201ENST00000299333 NOX5Q96PH1 765 aa16.6■□□□□ 0.25
SCN3B-201ENST00000299333 CCDC61Q9Y6R9 512 aa16.6■□□□□ 0.25
SCN3B-201ENST00000299333 NUTM2BA6NNL0 878 aaPredicted RBP16.59■□□□□ 0.25
SCN3B-201ENST00000299333 NUTM2EB1AL46 878 aaPredicted RBP16.59■□□□□ 0.25
SCN3B-201ENST00000299333 ANXA1P04083 346 aa16.59■□□□□ 0.25
SCN3B-201ENST00000299333 RXRAP19793 462 aa16.59■□□□□ 0.25
SCN3B-201ENST00000299333 FAF1Q9UNN5 650 aaPredicted RBP16.59■□□□□ 0.25
SCN3B-201ENST00000299333 ZPR1O75312 459 aa16.59■□□□□ 0.25
SCN3B-201ENST00000299333 PPFIA4O75335 1185 aa16.59■□□□□ 0.25
SCN3B-201ENST00000299333 SATB1Q01826 763 aa16.59■□□□□ 0.25
SCN3B-201ENST00000299333 ABTB1Q969K4 478 aaPredicted RBP16.59■□□□□ 0.25
SCN3B-201ENST00000299333 FAM212AQ96EL1 285 aa16.59■□□□□ 0.25
SCN3B-201ENST00000299333 XAB2Q9HCS7 855 aaKnown RBP16.59■□□□□ 0.25
SCN3B-201ENST00000299333 CLSTN2Q9H4D0 955 aa16.59■□□□□ 0.25
SCN3B-201ENST00000299333 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.59■□□□□ 0.25
SCN3B-201ENST00000299333 LDHCP07864 332 aa16.59■□□□□ 0.25
SCN3B-201ENST00000299333 ZNF445P59923 1031 aa16.59■□□□□ 0.25
SCN3B-201ENST00000299333 AMOTQ4VCS5 1084 aa16.59■□□□□ 0.25
SCN3B-201ENST00000299333 DNMBPQ6XZF7 1577 aa16.59■□□□□ 0.25
SCN3B-201ENST00000299333 MRC2Q9UBG0 1479 aa16.59■□□□□ 0.25
SCN3B-201ENST00000299333 CEP104O60308 925 aa16.59■□□□□ 0.25
SCN3B-201ENST00000299333 CHMP2AO43633 222 aa16.58■□□□□ 0.25
SCN3B-201ENST00000299333 KRT71Q3SY84 523 aa16.58■□□□□ 0.25
SCN3B-201ENST00000299333 SEPT8Q92599 483 aa16.58■□□□□ 0.25
SCN3B-201ENST00000299333 ARHGAP45Q92619 1136 aa16.58■□□□□ 0.25
SCN3B-201ENST00000299333 USP26Q9BXU7 913 aa16.58■□□□□ 0.25
SCN3B-201ENST00000299333 CSRNP2Q9H175 543 aa16.58■□□□□ 0.25
SCN3B-201ENST00000299333 CABP5Q9NP86 173 aa16.58■□□□□ 0.25
SCN3B-201ENST00000299333 IMPACTQ9P2X3 320 aa16.58■□□□□ 0.25
SCN3B-201ENST00000299333 AGTPBP1Q9UPW5 1226 aa16.58■□□□□ 0.25
SCN3B-201ENST00000299333 HIP1RO75146 1068 aa16.58■□□□□ 0.24
SCN3B-201ENST00000299333 CPA1P15085 419 aa16.58■□□□□ 0.24
SCN3B-201ENST00000299333 DTHD1Q6ZMT9 781 aa16.58■□□□□ 0.24
SCN3B-201ENST00000299333 GPIHBP1Q8IV16 184 aa16.58■□□□□ 0.24
SCN3B-201ENST00000299333 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.24
SCN3B-201ENST00000299333 VWA3AA6NCI4 1184 aa16.58■□□□□ 0.24
SCN3B-201ENST00000299333 CYP7A1P22680 504 aa16.58■□□□□ 0.24
SCN3B-201ENST00000299333 TRAF5O00463 557 aa16.58■□□□□ 0.24
SCN3B-201ENST00000299333 ARHGAP6O43182 974 aa16.58■□□□□ 0.24
SCN3B-201ENST00000299333 ANKRD20A3Q5VUR7 823 aa16.58■□□□□ 0.24
SCN3B-201ENST00000299333 ANKRD42Q8N9B4 389 aa16.58■□□□□ 0.24
SCN3B-201ENST00000299333 UQCRFS1P1P0C7P4 283 aa16.57■□□□□ 0.24
SCN3B-201ENST00000299333 FAM69CQ0P6D2 419 aa16.57■□□□□ 0.24
SCN3B-201ENST00000299333 STAG1Q8WVM7 1258 aa16.57■□□□□ 0.24
SCN3B-201ENST00000299333 C6orf50Q9HD87 102 aa16.57■□□□□ 0.24
SCN3B-201ENST00000299333 MAPK8IP1Q9UQF2 711 aa16.57■□□□□ 0.24
SCN3B-201ENST00000299333 TBC1D31Q96DN5 1066 aa16.57■□□□□ 0.24
SCN3B-201ENST00000299333 NUCKS1Q9H1E3 243 aaKnown RBP16.57■□□□□ 0.24
SCN3B-201ENST00000299333 ASIC3Q9UHC3 531 aa16.57■□□□□ 0.24
SCN3B-201ENST00000299333 SMIM24O75264 130 aa16.57■□□□□ 0.24
SCN3B-201ENST00000299333 TNFAIP3P21580 790 aa16.57■□□□□ 0.24
SCN3B-201ENST00000299333 SESN3P58005 492 aa16.57■□□□□ 0.24
SCN3B-201ENST00000299333 FAM204AQ9H8W3 233 aa16.57■□□□□ 0.24
SCN3B-201ENST00000299333 HLA-DOAP06340 250 aa16.57■□□□□ 0.24
SCN3B-201ENST00000299333 BEND3Q5T5X7 828 aa16.57■□□□□ 0.24
SCN3B-201ENST00000299333 CAMSAP2Q08AD1 1489 aa16.57■□□□□ 0.24
SCN3B-201ENST00000299333 GNAQP50148 359 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 CROCCP2Q86T23 111 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 TNNQ9UQP3 1299 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 KRT15P19012 456 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 ATP1A2P50993 1020 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 MTX1Q13505 466 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 NAA16Q6N069 864 aaPredicted RBP16.56■□□□□ 0.24
SCN3B-201ENST00000299333 KCNH5Q8NCM2 988 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms