RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 SYT10Q6XYQ8 523 aa17.1■□□□□ 0.33
CCT3-201ENST00000295688 VPS37DQ86XT2 251 aa17.1■□□□□ 0.33
CCT3-201ENST00000295688 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.1■□□□□ 0.33
CCT3-201ENST00000295688 SH2B2O14492 632 aaPredicted RBP17.09■□□□□ 0.33
CCT3-201ENST00000295688 SERPINC1P01008 464 aa17.09■□□□□ 0.33
CCT3-201ENST00000295688 ADD2P35612 726 aa17.09■□□□□ 0.33
CCT3-201ENST00000295688 BMS1Q14692 1282 aaKnown RBP17.09■□□□□ 0.33
CCT3-201ENST00000295688 RESP18Q5W5W9 173 aa17.09■□□□□ 0.33
CCT3-201ENST00000295688 HOMER1Q86YM7 354 aa17.09■□□□□ 0.33
CCT3-201ENST00000295688 CABLES1Q8TDN4 633 aa17.09■□□□□ 0.33
CCT3-201ENST00000295688 ATRNO75882 1429 aa17.09■□□□□ 0.33
CCT3-201ENST00000295688 MARCKSP29966 332 aaPredicted RBP17.09■□□□□ 0.33
CCT3-201ENST00000295688 UBE3CQ15386 1083 aa17.09■□□□□ 0.33
CCT3-201ENST00000295688 CCDC102BQ68D86 513 aa17.09■□□□□ 0.33
CCT3-201ENST00000295688 TEX13AQ9BXU3 409 aaPredicted RBP17.09■□□□□ 0.33
CCT3-201ENST00000295688 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.09■□□□□ 0.333e-8■■■□□ 14.7
CCT3-201ENST00000295688 ZSCAN12O43309 604 aa17.08■□□□□ 0.33
CCT3-201ENST00000295688 SCARF1Q14162 830 aa17.08■□□□□ 0.33
CCT3-201ENST00000295688 PTPAQ15257 358 aa17.08■□□□□ 0.33
CCT3-201ENST00000295688 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.08■□□□□ 0.339e-7■□□□□ 10.3
CCT3-201ENST00000295688 V9GYY5 206 aaPredicted RBP17.08■□□□□ 0.33
CCT3-201ENST00000295688 MROH7-TTC4A0A0A0MT08 1334 aa17.08■□□□□ 0.32
CCT3-201ENST00000295688 TPM1P09493 284 aa17.08■□□□□ 0.32
CCT3-201ENST00000295688 IARSP41252 1262 aaKnown RBP17.08■□□□□ 0.32
CCT3-201ENST00000295688 KIF6Q6ZMV9 814 aa17.08■□□□□ 0.32
CCT3-201ENST00000295688 ZBTB38Q8NAP3 1195 aaPredicted RBP17.08■□□□□ 0.32
CCT3-201ENST00000295688 WASF1Q92558 559 aa17.08■□□□□ 0.32
CCT3-201ENST00000295688 NOL10Q9BSC4 688 aaKnown RBP17.08■□□□□ 0.32
CCT3-201ENST00000295688 TMX1Q9H3N1 280 aa17.08■□□□□ 0.32
CCT3-201ENST00000295688 GJB4Q9NTQ9 266 aa17.08■□□□□ 0.32
CCT3-201ENST00000295688 MAP3K15Q6ZN16 1313 aa17.07■□□□□ 0.32
CCT3-201ENST00000295688 TNS2Q63HR2 1409 aa17.07■□□□□ 0.32
CCT3-201ENST00000295688 ZBTB43O43298 467 aa17.07■□□□□ 0.32
CCT3-201ENST00000295688 H2AFXP16104 143 aaPredicted RBP17.07■□□□□ 0.32
CCT3-201ENST00000295688 METTL24Q5JXM2 366 aa17.07■□□□□ 0.32
CCT3-201ENST00000295688 SHC4Q6S5L8 630 aa17.07■□□□□ 0.32
CCT3-201ENST00000295688 ARGLU1Q9NWB6 273 aaPredicted RBP17.07■□□□□ 0.32
CCT3-201ENST00000295688 SPATA31A3Q5VYP0 1347 aa17.07■□□□□ 0.32
CCT3-201ENST00000295688 WDR17Q8IZU2 1322 aa17.07■□□□□ 0.32
CCT3-201ENST00000295688 CDHR2Q9BYE9 1310 aa17.07■□□□□ 0.32
CCT3-201ENST00000295688 STK36Q9NRP7 1315 aa17.07■□□□□ 0.32
CCT3-201ENST00000295688 GOLGA6L9A6NEM1 432 aa17.06■□□□□ 0.32
CCT3-201ENST00000295688 TOP1P11387 765 aaKnown RBP17.06■□□□□ 0.32
CCT3-201ENST00000295688 CFAP100Q494V2 611 aa17.06■□□□□ 0.32
CCT3-201ENST00000295688 APOA5Q6Q788 366 aa17.06■□□□□ 0.32
CCT3-201ENST00000295688 RAB11FIP4Q86YS3 637 aa17.06■□□□□ 0.32
CCT3-201ENST00000295688 VSTM4Q8IW00 320 aa17.06■□□□□ 0.32
CCT3-201ENST00000295688 MAP3K14Q99558 947 aa17.06■□□□□ 0.32
CCT3-201ENST00000295688 AKAP11Q9UKA4 1901 aa17.06■□□□□ 0.32
CCT3-201ENST00000295688 ALX1Q15699 326 aa17.06■□□□□ 0.32
CCT3-201ENST00000295688 SLC9C2Q5TAH2 1124 aa17.06■□□□□ 0.32
CCT3-201ENST00000295688 SGMS1Q86VZ5 419 aa17.06■□□□□ 0.32
CCT3-201ENST00000295688 CNNM3Q8NE01 707 aa17.06■□□□□ 0.32
CCT3-201ENST00000295688 HSD3B7Q9H2F3 369 aa17.06■□□□□ 0.32
CCT3-201ENST00000295688 DACH1Q9UI36 760 aa17.06■□□□□ 0.32
CCT3-201ENST00000295688 TBC1D2BQ9UPU7 963 aa17.06■□□□□ 0.32
CCT3-201ENST00000295688 RIPOR2Q9Y4F9 1068 aa17.06■□□□□ 0.32
CCT3-201ENST00000295688 APPP05067 770 aa17.05■□□□□ 0.32
CCT3-201ENST00000295688 MCAMP43121 646 aa17.05■□□□□ 0.32
CCT3-201ENST00000295688 KRBA2Q6ZNG9 492 aa17.05■□□□□ 0.32
CCT3-201ENST00000295688 CYB5R4Q7L1T6 521 aa17.05■□□□□ 0.32
CCT3-201ENST00000295688 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCT3-201ENST00000295688 GOLGA8AA7E2F4 631 aa17.05■□□□□ 0.32
CCT3-201ENST00000295688 ARHGAP6O43182 974 aa17.05■□□□□ 0.32
CCT3-201ENST00000295688 UQCRFS1P1P0C7P4 283 aa17.05■□□□□ 0.32
CCT3-201ENST00000295688 ATP1A3P13637 1013 aa17.05■□□□□ 0.32
CCT3-201ENST00000295688 LIFRP42702 1097 aa17.05■□□□□ 0.32
CCT3-201ENST00000295688 SSRP1Q08945 709 aaKnown RBP17.05■□□□□ 0.32
CCT3-201ENST00000295688 ERCC6LQ2NKX8 1250 aa17.05■□□□□ 0.32
CCT3-201ENST00000295688 LDHAL6AQ6ZMR3 332 aa17.05■□□□□ 0.32
CCT3-201ENST00000295688 NFXL1Q6ZNB6 911 aa17.05■□□□□ 0.32
CCT3-201ENST00000295688 TOM1L2Q6ZVM7 507 aa17.05■□□□□ 0.32
CCT3-201ENST00000295688 CADPS2Q86UW7 1296 aa17.05■□□□□ 0.32
CCT3-201ENST00000295688 DDX17Q92841 729 aaKnown RBP17.05■□□□□ 0.32
CCT3-201ENST00000295688 NBPF3Q9H094 633 aa17.05■□□□□ 0.32
CCT3-201ENST00000295688 KCNH3Q9ULD8 1083 aa17.05■□□□□ 0.32
CCT3-201ENST00000295688 PNOCQ13519 176 aa17.04■□□□□ 0.32
CCT3-201ENST00000295688 SAFBQ15424 915 aaKnown RBP eCLIP17.04■□□□□ 0.32
CCT3-201ENST00000295688 RIC1Q4ADV7 1423 aa17.04■□□□□ 0.32
CCT3-201ENST00000295688 HSP90AB3PQ58FF7 597 aa17.04■□□□□ 0.32
CCT3-201ENST00000295688 ISM2Q6H9L7 571 aa17.04■□□□□ 0.32
CCT3-201ENST00000295688 TBC1D10CQ8IV04 446 aa17.04■□□□□ 0.32
CCT3-201ENST00000295688 KRI1Q8N9T8 703 aaKnown RBP17.04■□□□□ 0.32
CCT3-201ENST00000295688 UBXN4Q92575 508 aa17.04■□□□□ 0.32
CCT3-201ENST00000295688 DNAI1Q9UI46 699 aa17.04■□□□□ 0.32
CCT3-201ENST00000295688 ANKRD18BA2A2Z9 1011 aa17.04■□□□□ 0.32
CCT3-201ENST00000295688 MNS1Q8NEH6 495 aa17.04■□□□□ 0.32
CCT3-201ENST00000295688 IGDCC4Q8TDY8 1250 aa17.04■□□□□ 0.32
CCT3-201ENST00000295688 FAM89AQ96GI7 184 aa17.04■□□□□ 0.32
CCT3-201ENST00000295688 AIFM3Q96NN9 605 aa17.04■□□□□ 0.32
CCT3-201ENST00000295688 CDC27P30260 824 aa17.03■□□□□ 0.32
CCT3-201ENST00000295688 NTRK3Q16288 839 aa17.03■□□□□ 0.32
CCT3-201ENST00000295688 MPHOSPH8Q99549 860 aa17.03■□□□□ 0.32
CCT3-201ENST00000295688 BCL11BQ9C0K0 894 aaPredicted RBP17.03■□□□□ 0.32
CCT3-201ENST00000295688 CNNM2Q9H8M5 875 aa17.03■□□□□ 0.32
CCT3-201ENST00000295688 CNNM1Q9NRU3 951 aa17.03■□□□□ 0.32
CCT3-201ENST00000295688 IL2RBP14784 551 aa17.02■□□□□ 0.32
CCT3-201ENST00000295688 TMEM67Q5HYA8 995 aa17.02■□□□□ 0.32
CCT3-201ENST00000295688 PI16Q6UXB8 463 aa17.02■□□□□ 0.32
CCT3-201ENST00000295688 METTL16Q86W50 562 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms