RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 SH2D4BQ5SQS7 431 aa16.62■□□□□ 0.25
SEC16A-202ENST00000290037 MSL1Q68DK7 614 aa16.62■□□□□ 0.25
SEC16A-202ENST00000290037 TPTE2Q6XPS3 522 aa16.62■□□□□ 0.25
SEC16A-202ENST00000290037 MICU3Q86XE3 530 aa16.62■□□□□ 0.25
SEC16A-202ENST00000290037 OGFOD1Q8N543 542 aa16.62■□□□□ 0.25
SEC16A-202ENST00000290037 USP48Q86UV5 1035 aa16.61■□□□□ 0.25
SEC16A-202ENST00000290037 PLBD2Q8NHP8 589 aa16.61■□□□□ 0.25
SEC16A-202ENST00000290037 USP26Q9BXU7 913 aa16.61■□□□□ 0.25
SEC16A-202ENST00000290037 VAMP4O75379 141 aa16.61■□□□□ 0.25
SEC16A-202ENST00000290037 CCDC121Q6ZUS5 278 aa16.61■□□□□ 0.25
SEC16A-202ENST00000290037 SETDB2Q96T68 719 aa16.61■□□□□ 0.25
SEC16A-202ENST00000290037 CHD1O14646 1710 aa16.61■□□□□ 0.25
SEC16A-202ENST00000290037 UGGT1Q9NYU2 1555 aa16.61■□□□□ 0.25
SEC16A-202ENST00000290037 NOP2P46087 812 aaKnown RBP16.61■□□□□ 0.25
SEC16A-202ENST00000290037 CALCOCO2Q13137 446 aa16.61■□□□□ 0.25
SEC16A-202ENST00000290037 WDR66Q8TBY9 1149 aa16.61■□□□□ 0.25
SEC16A-202ENST00000290037 MAGEB6P1A0A0J9YX57 407 aa16.61■□□□□ 0.25
SEC16A-202ENST00000290037 A0A1W2PRG0 241 aa16.61■□□□□ 0.25
SEC16A-202ENST00000290037 PUM3Q15397 648 aaKnown RBP16.61■□□□□ 0.25
SEC16A-202ENST00000290037 CREB3L3Q68CJ9 461 aa16.61■□□□□ 0.25
SEC16A-202ENST00000290037 MAATS1Q7Z4T9 603 aa16.61■□□□□ 0.25
SEC16A-202ENST00000290037 PLEKHM2Q8IWE5 1019 aa16.61■□□□□ 0.25
SEC16A-202ENST00000290037 EIF3CLB5ME19 914 aaKnown RBP16.61■□□□□ 0.25
SEC16A-202ENST00000290037 N4BP1O75113 896 aaKnown RBP16.61■□□□□ 0.25
SEC16A-202ENST00000290037 MAP3K21Q5TCX8 1036 aa16.61■□□□□ 0.25
SEC16A-202ENST00000290037 FAM76AQ8TAV0 307 aa16.61■□□□□ 0.25
SEC16A-202ENST00000290037 EIF3CQ99613 913 aaKnown RBP16.61■□□□□ 0.25
SEC16A-202ENST00000290037 ANGEL1Q9UNK9 670 aaKnown RBP16.61■□□□□ 0.25
SEC16A-202ENST00000290037 CHMLP26374 656 aa16.6■□□□□ 0.25
SEC16A-202ENST00000290037 CAMSAP1Q5T5Y3 1602 aa16.6■□□□□ 0.25
SEC16A-202ENST00000290037 PPP1R14CQ8TAE6 165 aa16.6■□□□□ 0.25
SEC16A-202ENST00000290037 RFX7Q2KHR2 1363 aa16.6■□□□□ 0.25
SEC16A-202ENST00000290037 GOLGA8QA0A0J9YX86 632 aa16.6■□□□□ 0.25
SEC16A-202ENST00000290037 GOLGA8OA6NCC3 632 aa16.6■□□□□ 0.25
SEC16A-202ENST00000290037 GOLGA8NF8WBI6 632 aa16.6■□□□□ 0.25
SEC16A-202ENST00000290037 EPB41P11171 864 aaKnown RBP16.6■□□□□ 0.25
SEC16A-202ENST00000290037 FERMT3Q86UX7 667 aa16.6■□□□□ 0.25
SEC16A-202ENST00000290037 NBPF5PQ86XG9 351 aaPredicted RBP16.6■□□□□ 0.25
SEC16A-202ENST00000290037 MED14O60244 1454 aa16.6■□□□□ 0.25
SEC16A-202ENST00000290037 TMCO5BA8MYB1 307 aa16.6■□□□□ 0.25
SEC16A-202ENST00000290037 CCDC38Q502W7 563 aa16.59■□□□□ 0.25
SEC16A-202ENST00000290037 GOPCQ9HD26 462 aa16.59■□□□□ 0.25
SEC16A-202ENST00000290037 SEL1L2Q5TEA6 688 aa16.59■□□□□ 0.25
SEC16A-202ENST00000290037 RPS6KB1P23443 525 aa16.59■□□□□ 0.25
SEC16A-202ENST00000290037 SPATA31E1Q6ZUB1 1445 aa16.59■□□□□ 0.25
SEC16A-202ENST00000290037 SLC8A3P57103 927 aa16.59■□□□□ 0.25
SEC16A-202ENST00000290037 ARMC9Q7Z3E5 817 aa16.59■□□□□ 0.25
SEC16A-202ENST00000290037 KRT25Q7Z3Z0 450 aa16.59■□□□□ 0.25
SEC16A-202ENST00000290037 TMC4Q7Z404 712 aa16.59■□□□□ 0.25
SEC16A-202ENST00000290037 SRGAP1Q7Z6B7 1085 aa16.59■□□□□ 0.25
SEC16A-202ENST00000290037 LGSNQ5TDP6 509 aa16.59■□□□□ 0.25
SEC16A-202ENST00000290037 BRD3Q15059 726 aa16.59■□□□□ 0.25
SEC16A-202ENST00000290037 ANAPC4Q9UJX5 808 aa16.59■□□□□ 0.25
SEC16A-202ENST00000290037 PRC1O43663 620 aa16.59■□□□□ 0.25
SEC16A-202ENST00000290037 CDC25BP30305 580 aa16.59■□□□□ 0.25
SEC16A-202ENST00000290037 MAN1A1P33908 653 aa16.59■□□□□ 0.25
SEC16A-202ENST00000290037 GBP6Q6ZN66 633 aa16.59■□□□□ 0.25
SEC16A-202ENST00000290037 STK10O94804 968 aaKnown RBP16.58■□□□□ 0.25
SEC16A-202ENST00000290037 CKAP2LQ8IYA6 745 aa16.58■□□□□ 0.25
SEC16A-202ENST00000290037 ZCCHC11Q5TAX3 1644 aaKnown RBP16.58■□□□□ 0.25
SEC16A-202ENST00000290037 FLOT1O75955 427 aa16.58■□□□□ 0.25
SEC16A-202ENST00000290037 Q6ZUG5 572 aa16.58■□□□□ 0.25
SEC16A-202ENST00000290037 DRC1Q96MC2 740 aa16.58■□□□□ 0.25
SEC16A-202ENST00000290037 KDM2BQ8NHM5 1336 aa16.58■□□□□ 0.25
SEC16A-202ENST00000290037 A0A1B0GVL5 298 aa16.58■□□□□ 0.24
SEC16A-202ENST00000290037 NOX5Q96PH1 765 aa16.58■□□□□ 0.24
SEC16A-202ENST00000290037 RSRC1Q96IZ7 334 aaKnown RBP16.58■□□□□ 0.24
SEC16A-202ENST00000290037 SV2BQ7L1I2 683 aa16.58■□□□□ 0.24
SEC16A-202ENST00000290037 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.58■□□□□ 0.241e-6■■■□□ 16.9
SEC16A-202ENST00000290037 METTL22Q9BUU2 404 aaPredicted RBP16.58■□□□□ 0.24
SEC16A-202ENST00000290037 HCLS1P14317 486 aaPredicted RBP16.58■□□□□ 0.24
SEC16A-202ENST00000290037 KIF11P52732 1056 aa16.58■□□□□ 0.24
SEC16A-202ENST00000290037 WAPLQ7Z5K2 1190 aa16.58■□□□□ 0.24
SEC16A-202ENST00000290037 USP19O94966 1318 aa16.57■□□□□ 0.24
SEC16A-202ENST00000290037 CLSTN2Q9H4D0 955 aa16.57■□□□□ 0.24
SEC16A-202ENST00000290037 MED4Q9NPJ6 270 aa16.57■□□□□ 0.24
SEC16A-202ENST00000290037 FRMPD1Q5SYB0 1578 aa16.57■□□□□ 0.24
SEC16A-202ENST00000290037 QRICH2Q9H0J4 1663 aa16.57■□□□□ 0.24
SEC16A-202ENST00000290037 RFC4P35249 363 aa16.57■□□□□ 0.24
SEC16A-202ENST00000290037 NAPAP54920 295 aa16.57■□□□□ 0.24
SEC16A-202ENST00000290037 LIN9Q5TKA1 542 aa16.57■□□□□ 0.24
SEC16A-202ENST00000290037 APPBP2Q92624 585 aa16.57■□□□□ 0.24
SEC16A-202ENST00000290037 BRF1Q92994 677 aa16.57■□□□□ 0.24
SEC16A-202ENST00000290037 ASIC1P78348 528 aa16.57■□□□□ 0.24
SEC16A-202ENST00000290037 LACTBP83111 547 aaPredicted RBP16.57■□□□□ 0.24
SEC16A-202ENST00000290037 SUPT20HQ8NEM7 779 aa16.57■□□□□ 0.24
SEC16A-202ENST00000290037 BAG1Q99933 345 aaPredicted RBP16.57■□□□□ 0.24
SEC16A-202ENST00000290037 CHPF2Q9P2E5 772 aa16.57■□□□□ 0.24
SEC16A-202ENST00000290037 RABGAP1Q9Y3P9 1069 aa16.57■□□□□ 0.24
SEC16A-202ENST00000290037 BZW2Q9Y6E2 419 aaKnown RBP16.57■□□□□ 0.24
SEC16A-202ENST00000290037 SYNCQ9H7C4 482 aa16.57■□□□□ 0.24
SEC16A-202ENST00000290037 POLKQ9UBT6 870 aa16.57■□□□□ 0.24
SEC16A-202ENST00000290037 TRAPPC10P48553 1259 aa16.57■□□□□ 0.24
SEC16A-202ENST00000290037 RGS12O14924 1447 aa16.56■□□□□ 0.24
SEC16A-202ENST00000290037 TCERG1LQ5VWI1 586 aa16.56■□□□□ 0.24
SEC16A-202ENST00000290037 MPRIPQ6WCQ1 1025 aa16.56■□□□□ 0.24
SEC16A-202ENST00000290037 KDRP35968 1356 aa16.56■□□□□ 0.24
SEC16A-202ENST00000290037 A0A1B0GUA9 196 aa16.56■□□□□ 0.24
SEC16A-202ENST00000290037 ZNF274Q96GC6 653 aaPredicted RBP16.56■□□□□ 0.24
SEC16A-202ENST00000290037 SCLT1Q96NL6 688 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms