RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 ZNF609O15014 1411 aa15.35■□□□□ 0.05
SCAF4-201ENST00000286835 EYA2O00167 538 aa15.35■□□□□ 0.05
SCAF4-201ENST00000286835 GPAA1O43292 621 aa15.35■□□□□ 0.05
SCAF4-201ENST00000286835 SSRP1Q08945 709 aaKnown RBP15.35■□□□□ 0.05
SCAF4-201ENST00000286835 DACH1Q9UI36 760 aa15.35■□□□□ 0.05
SCAF4-201ENST00000286835 YEATS4O95619 227 aa15.34■□□□□ 0.05
SCAF4-201ENST00000286835 ADORA1P30542 326 aa15.34■□□□□ 0.05
SCAF4-201ENST00000286835 HELBQ8NG08 1087 aaPredicted RBP15.34■□□□□ 0.05
SCAF4-201ENST00000286835 SMARCC2Q8TAQ2 1214 aa15.34■□□□□ 0.05
SCAF4-201ENST00000286835 IL17RAQ96F46 866 aa15.34■□□□□ 0.05
SCAF4-201ENST00000286835 FAM89AQ96GI7 184 aa15.34■□□□□ 0.05
SCAF4-201ENST00000286835 POLR2DO15514 142 aaKnown RBP15.34■□□□□ 0.05
SCAF4-201ENST00000286835 SART3Q15020 963 aaKnown RBP15.34■□□□□ 0.05
SCAF4-201ENST00000286835 NYAP1Q6ZVC0 841 aa15.34■□□□□ 0.05
SCAF4-201ENST00000286835 DPF2Q92785 391 aa15.34■□□□□ 0.05
SCAF4-201ENST00000286835 AKAP2Q9Y2D5 859 aa15.34■□□□□ 0.05
SCAF4-201ENST00000286835 MINDY4BA8MYZ0 360 aa15.34■□□□□ 0.05
SCAF4-201ENST00000286835 CCDC191Q8NCU4 936 aa15.34■□□□□ 0.05
SCAF4-201ENST00000286835 ANKRD20A12PQ8NF67 263 aa15.34■□□□□ 0.05
SCAF4-201ENST00000286835 DHX58Q96C10 678 aa15.34■□□□□ 0.05
SCAF4-201ENST00000286835 VPS18Q9P253 973 aa15.34■□□□□ 0.05
SCAF4-201ENST00000286835 PCDHA5Q9Y5H7 936 aa15.34■□□□□ 0.05
SCAF4-201ENST00000286835 RBM43Q6ZSC3 357 aaKnown RBP15.33■□□□□ 0.05
SCAF4-201ENST00000286835 KCNJ14Q9UNX9 436 aa15.33■□□□□ 0.05
SCAF4-201ENST00000286835 CAGE1Q8TC20 777 aa15.33■□□□□ 0.04
SCAF4-201ENST00000286835 XAGE2Q96GT9 111 aa15.33■□□□□ 0.04
SCAF4-201ENST00000286835 PPP2R2CQ9Y2T4 447 aa15.33■□□□□ 0.04
SCAF4-201ENST00000286835 PSDA5PKW4 1024 aaPredicted RBP15.33■□□□□ 0.04
SCAF4-201ENST00000286835 COBLO75128 1261 aa15.33■□□□□ 0.04
SCAF4-201ENST00000286835 LONRF3Q496Y0 759 aa15.33■□□□□ 0.04
SCAF4-201ENST00000286835 ZMYM1Q5SVZ6 1142 aa15.33■□□□□ 0.04
SCAF4-201ENST00000286835 STAMQ92783 540 aa15.33■□□□□ 0.04
SCAF4-201ENST00000286835 AXIN2Q9Y2T1 843 aa15.33■□□□□ 0.04
SCAF4-201ENST00000286835 SMC1AQ14683 1233 aaKnown RBP15.32■□□□□ 0.04
SCAF4-201ENST00000286835 ZNF569Q5MCW4 686 aa15.32■□□□□ 0.04
SCAF4-201ENST00000286835 GRAMD1CQ8IYS0 662 aa15.32■□□□□ 0.04
SCAF4-201ENST00000286835 SRRTQ9BXP5 876 aaKnown RBP15.32■□□□□ 0.04
SCAF4-201ENST00000286835 RAI14Q9P0K7 980 aa15.32■□□□□ 0.04
SCAF4-201ENST00000286835 ERLIN1O75477 346 aa15.32■□□□□ 0.04
SCAF4-201ENST00000286835 HNRNPH2P55795 449 aaKnown RBP15.32■□□□□ 0.04
SCAF4-201ENST00000286835 GOLGA1Q92805 767 aa15.32■□□□□ 0.04
SCAF4-201ENST00000286835 A0A1W2PQ27 194 aa15.32■□□□□ 0.04
SCAF4-201ENST00000286835 A0A1W2PQ64 194 aa15.32■□□□□ 0.04
SCAF4-201ENST00000286835 A0A1W2PQD8 194 aa15.32■□□□□ 0.04
SCAF4-201ENST00000286835 CMA1P23946 247 aa15.32■□□□□ 0.04
SCAF4-201ENST00000286835 ATP6V1AP38606 617 aa15.32■□□□□ 0.04
SCAF4-201ENST00000286835 TSGA10IPQ3SY00 556 aa15.32■□□□□ 0.04
SCAF4-201ENST00000286835 NUP88Q99567 741 aaPredicted RBP15.32■□□□□ 0.04
SCAF4-201ENST00000286835 ARHGAP6O43182 974 aa15.31■□□□□ 0.04
SCAF4-201ENST00000286835 ENGASEQ8NFI3 743 aa15.31■□□□□ 0.04
SCAF4-201ENST00000286835 hCG_1642624A0A1W2PR95 340 aa15.31■□□□□ 0.04
SCAF4-201ENST00000286835 KIF28PB7ZC32 967 aa15.31■□□□□ 0.04
SCAF4-201ENST00000286835 USPL1Q5W0Q7 1092 aa15.31■□□□□ 0.04
SCAF4-201ENST00000286835 ANGEL1Q9UNK9 670 aaKnown RBP15.31■□□□□ 0.04
SCAF4-201ENST00000286835 IPO7O95373 1038 aaKnown RBP15.31■□□□□ 0.04
SCAF4-201ENST00000286835 CCT6AP40227 531 aaKnown RBP15.31■□□□□ 0.04
SCAF4-201ENST00000286835 PLBD2Q8NHP8 589 aa15.31■□□□□ 0.04
SCAF4-201ENST00000286835 OSBPL5Q9H0X9 879 aaPredicted RBP15.31■□□□□ 0.04
SCAF4-201ENST00000286835 IQSEC3Q9UPP2 1182 aaPredicted RBP15.31■□□□□ 0.04
SCAF4-201ENST00000286835 EIF3JO75822 258 aaKnown RBP15.3■□□□□ 0.04
SCAF4-201ENST00000286835 CCDC175P0C221 793 aa15.3■□□□□ 0.04
SCAF4-201ENST00000286835 KIF23Q02241 960 aaPredicted RBP15.3■□□□□ 0.04
SCAF4-201ENST00000286835 TXLNBQ8N3L3 684 aa15.3■□□□□ 0.04
SCAF4-201ENST00000286835 UBAC1Q9BSL1 405 aa15.3■□□□□ 0.04
SCAF4-201ENST00000286835 PPP1R1BQ9UD71 204 aaPredicted RBP15.3■□□□□ 0.04
SCAF4-201ENST00000286835 ABCF2Q9UG63 623 aa15.3■□□□□ 0.04
SCAF4-201ENST00000286835 PXDNLA1KZ92 1463 aa15.3■□□□□ 0.04
SCAF4-201ENST00000286835 ITSN1Q15811 1721 aa15.3■□□□□ 0.04
SCAF4-201ENST00000286835 FDPSP14324 419 aaKnown RBP15.3■□□□□ 0.04
SCAF4-201ENST00000286835 CAPN2P17655 700 aa15.3■□□□□ 0.04
SCAF4-201ENST00000286835 AXDND1Q5T1B0 1012 aaPredicted RBP15.3■□□□□ 0.04
SCAF4-201ENST00000286835 BRINP3Q76B58 766 aa15.3■□□□□ 0.04
SCAF4-201ENST00000286835 KRI1Q8N9T8 703 aaKnown RBP15.3■□□□□ 0.04
SCAF4-201ENST00000286835 PUS7LQ9H0K6 701 aaKnown RBP15.3■□□□□ 0.04
SCAF4-201ENST00000286835 PCDH11XQ9BZA7 1347 aa15.3■□□□□ 0.04
SCAF4-201ENST00000286835 PCDH11YQ9BZA8 1340 aa15.3■□□□□ 0.04
SCAF4-201ENST00000286835 ZPR1O75312 459 aa15.3■□□□□ 0.04
SCAF4-201ENST00000286835 NBPF11Q86T75 865 aa15.3■□□□□ 0.04
SCAF4-201ENST00000286835 POLR3EQ9NVU0 708 aa15.3■□□□□ 0.04
SCAF4-201ENST00000286835 AGLP35573 1532 aa15.3■□□□□ 0.04
SCAF4-201ENST00000286835 RAD21O60216 631 aa15.29■□□□□ 0.04
SCAF4-201ENST00000286835 WDHD1O75717 1129 aaPredicted RBP15.29■□□□□ 0.04
SCAF4-201ENST00000286835 INCENPQ9NQS7 918 aa15.29■□□□□ 0.04
SCAF4-201ENST00000286835 SERTAD1Q9UHV2 236 aa15.29■□□□□ 0.04
SCAF4-201ENST00000286835 GOLGA6L9A6NEM1 432 aa15.29■□□□□ 0.04
SCAF4-201ENST00000286835 FOXN1O15353 648 aa15.29■□□□□ 0.04
SCAF4-201ENST00000286835 ZFYP08048 801 aaPredicted RBP15.29■□□□□ 0.04
SCAF4-201ENST00000286835 FAM98CQ17RN3 349 aaKnown RBP15.29■□□□□ 0.04
SCAF4-201ENST00000286835 ALDH8A1Q9H2A2 487 aaPredicted RBP15.29■□□□□ 0.04
SCAF4-201ENST00000286835 BTBD18B2RXH4 712 aa15.29■□□□□ 0.04
SCAF4-201ENST00000286835 XBP1P17861 261 aa15.29■□□□□ 0.04
SCAF4-201ENST00000286835 APPBP2Q92624 585 aa15.29■□□□□ 0.04
SCAF4-201ENST00000286835 N4BP3O15049 544 aa15.28■□□□□ 0.04
SCAF4-201ENST00000286835 SLC39A14Q15043 492 aa15.28■□□□□ 0.04
SCAF4-201ENST00000286835 DIS3L2Q8IYB7 885 aaKnown RBP15.28■□□□□ 0.04
SCAF4-201ENST00000286835 TEX13AQ9BXU3 409 aaPredicted RBP15.28■□□□□ 0.04
SCAF4-201ENST00000286835 IRX2Q9BZI1 471 aaPredicted RBP15.28■□□□□ 0.04
SCAF4-201ENST00000286835 CABP5Q9NP86 173 aa15.28■□□□□ 0.04
SCAF4-201ENST00000286835 MAPK8IP1Q9UQF2 711 aa15.28■□□□□ 0.04
SCAF4-201ENST00000286835 CEMIPQ8WUJ3 1361 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms