RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 FAM160A1Q05DH4 1040 aa12.78□□□□□ -0.36
USP6NL-201ENST00000277575 GRM1Q13255 1194 aa12.78□□□□□ -0.36
USP6NL-201ENST00000277575 PROSER3Q2NL68 480 aa12.78□□□□□ -0.36
USP6NL-201ENST00000277575 EHBP1Q8NDI1 1231 aa12.78□□□□□ -0.36
USP6NL-201ENST00000277575 ATP7BP35670 1465 aa12.78□□□□□ -0.36
USP6NL-201ENST00000277575 ANO1Q5XXA6 986 aa12.78□□□□□ -0.36
USP6NL-201ENST00000277575 MAPKAPK5Q8IW41 473 aa12.78□□□□□ -0.36
USP6NL-201ENST00000277575 ZSWIM4Q9H7M6 989 aa12.78□□□□□ -0.36
USP6NL-201ENST00000277575 PHACTR2O75167 634 aa12.77□□□□□ -0.36
USP6NL-201ENST00000277575 FAM13AO94988 1023 aa12.77□□□□□ -0.36
USP6NL-201ENST00000277575 TBC1D5Q92609 795 aa12.77□□□□□ -0.36
USP6NL-201ENST00000277575 DSCC1Q9BVC3 393 aa12.77□□□□□ -0.36
USP6NL-201ENST00000277575 TM6SF1Q9BZW5 370 aa12.77□□□□□ -0.36
USP6NL-201ENST00000277575 DTNBO60941 627 aa12.77□□□□□ -0.37
USP6NL-201ENST00000277575 PTGS1P23219 599 aa12.77□□□□□ -0.37
USP6NL-201ENST00000277575 FCHSD1Q86WN1 690 aa12.77□□□□□ -0.37
USP6NL-201ENST00000277575 GTPBP4Q9BZE4 634 aaKnown RBP12.77□□□□□ -0.37
USP6NL-201ENST00000277575 ERBB3P21860 1342 aa12.77□□□□□ -0.37
USP6NL-201ENST00000277575 CEP135Q66GS9 1140 aa12.77□□□□□ -0.37
USP6NL-201ENST00000277575 FERMT2Q96AC1 680 aa12.77□□□□□ -0.37
USP6NL-201ENST00000277575 CCDC113Q9H0I3 377 aa12.77□□□□□ -0.37
USP6NL-201ENST00000277575 TTC12Q9H892 705 aaPredicted RBP12.77□□□□□ -0.37
USP6NL-201ENST00000277575 BICDL2A1A5D9 508 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 ALDH1B1P30837 517 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 PPP2R5BQ15173 497 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 SPECC1Q5M775 1068 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 ELP1O95163 1332 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 MAP3K15Q6ZN16 1313 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 GSPT1P15170 499 aaKnown RBP12.76□□□□□ -0.37
USP6NL-201ENST00000277575 IFFO1Q0D2I5 559 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 LRRC24Q50LG9 513 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 PIK3AP1Q6ZUJ8 805 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 TRMT2AQ8IZ69 625 aaKnown RBP12.76□□□□□ -0.37
USP6NL-201ENST00000277575 ARHGEF10LQ9HCE6 1279 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 SP4Q02446 784 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 IFI16Q16666 785 aaKnown RBP12.76□□□□□ -0.37
USP6NL-201ENST00000277575 AKNAD1Q5T1N1 836 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 PHKBQ93100 1093 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 COPRSQ9NQ92 184 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 E7EWF7 191 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 BACH1O14867 736 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 SLC1A4P43007 532 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 GYG1P46976 350 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 TFAP4Q01664 338 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 HOOK3Q86VS8 718 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 TGFBRAP1Q8WUH2 860 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 NAP1L4Q99733 375 aaKnown RBP12.76□□□□□ -0.37
USP6NL-201ENST00000277575 ZBTB21Q9ULJ3 1066 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 ZBTB1Q9Y2K1 713 aa12.76□□□□□ -0.37
USP6NL-201ENST00000277575 WDR17Q8IZU2 1322 aa12.75□□□□□ -0.37
USP6NL-201ENST00000277575 USP17L12C9JPN9 530 aa12.75□□□□□ -0.37
USP6NL-201ENST00000277575 USP17L21D6R901 530 aa12.75□□□□□ -0.37
USP6NL-201ENST00000277575 GTF2IP78347 998 aa12.75□□□□□ -0.37
USP6NL-201ENST00000277575 TCP10Q12799 353 aa12.75□□□□□ -0.37
USP6NL-201ENST00000277575 MFSD14BQ5SR56 506 aa12.75□□□□□ -0.37
USP6NL-201ENST00000277575 GIGYF2Q6Y7W6 1299 aaKnown RBP12.75□□□□□ -0.37
USP6NL-201ENST00000277575 A0A0D9SFI3 127 aa12.75□□□□□ -0.37
USP6NL-201ENST00000277575 TAOK3Q9H2K8 898 aa12.75□□□□□ -0.37
USP6NL-201ENST00000277575 GOPCQ9HD26 462 aa12.75□□□□□ -0.37
USP6NL-201ENST00000277575 IFNKQ9P0W0 207 aa12.75□□□□□ -0.37
USP6NL-201ENST00000277575 NOLC1Q14978 699 aaKnown RBP eCLIP12.75□□□□□ -0.37
USP6NL-201ENST00000277575 SUPT20HQ8NEM7 779 aa12.75□□□□□ -0.37
USP6NL-201ENST00000277575 DNAI1Q9UI46 699 aa12.75□□□□□ -0.37
USP6NL-201ENST00000277575 PRDM15P57071 1507 aaPredicted RBP12.75□□□□□ -0.37
USP6NL-201ENST00000277575 EZRP15311 586 aaKnown RBP12.74□□□□□ -0.37
USP6NL-201ENST00000277575 PDE6AP16499 860 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 BAG6P46379 1132 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 PLCD1P51178 756 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 ARID5AQ03989 594 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 ZYXQ15942 572 aaKnown RBP12.74□□□□□ -0.37
USP6NL-201ENST00000277575 KRT40Q6A162 431 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 DYDC1Q8WWB3 177 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 KCNH3Q9ULD8 1083 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 PLA2R1Q13018 1463 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 JAK2O60674 1132 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 MYL5Q02045 173 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 SEC62Q99442 399 aaKnown RBP12.74□□□□□ -0.37
USP6NL-201ENST00000277575 IMPG2Q9BZV3 1241 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 PAXBP1Q9Y5B6 917 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 IL6STP40189 918 aaPredicted RBP12.74□□□□□ -0.37
USP6NL-201ENST00000277575 BCAMP50895 628 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 SV2BQ7L1I2 683 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 PICK1Q9NRD5 415 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 GOLGA6L7A0A1B0GV03 622 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 CRKLP46109 303 aaKnown RBP12.74□□□□□ -0.37
USP6NL-201ENST00000277575 USPL1Q5W0Q7 1092 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 CCDC42Q96M95 316 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 GLT8D2Q9H1C3 349 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 GREM2Q9H772 168 aa12.74□□□□□ -0.37
USP6NL-201ENST00000277575 POTEB2H3BUK9 544 aa12.73□□□□□ -0.37
USP6NL-201ENST00000277575 HAUS7Q99871 368 aa12.73□□□□□ -0.37
USP6NL-201ENST00000277575 TTF2Q9UNY4 1162 aaKnown RBP12.73□□□□□ -0.37
USP6NL-201ENST00000277575 UBXN1Q04323 297 aa12.73□□□□□ -0.37
USP6NL-201ENST00000277575 PKD2L1Q9P0L9 805 aa12.73□□□□□ -0.37
USP6NL-201ENST00000277575 ZKSCAN5Q9Y2L8 839 aa12.73□□□□□ -0.37
USP6NL-201ENST00000277575 PPIP5K2O43314 1243 aa12.73□□□□□ -0.37
USP6NL-201ENST00000277575 ECM2O94769 699 aaPredicted RBP12.73□□□□□ -0.37
USP6NL-201ENST00000277575 PDE8BO95263 885 aa12.73□□□□□ -0.37
USP6NL-201ENST00000277575 PDE6BP35913 854 aa12.73□□□□□ -0.37
USP6NL-201ENST00000277575 PTH1RQ03431 593 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms