RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 RIPOR2Q9Y4F9 1068 aa25.62■■□□□ 1.69
CDR2-201ENST00000268383 RIC1Q4ADV7 1423 aa25.62■■□□□ 1.69
CDR2-201ENST00000268383 WDR17Q8IZU2 1322 aa25.62■■□□□ 1.69
CDR2-201ENST00000268383 ZNF532Q9HCE3 1301 aa25.62■■□□□ 1.69
CDR2-201ENST00000268383 PHKA1P46020 1223 aa25.62■■□□□ 1.69
CDR2-201ENST00000268383 APOA5Q6Q788 366 aa25.62■■□□□ 1.69
CDR2-201ENST00000268383 SPEF2Q9C093 1822 aa25.61■■□□□ 1.69
CDR2-201ENST00000268383 RANBP6O60518 1105 aaKnown RBP25.61■■□□□ 1.69
CDR2-201ENST00000268383 CCDC82Q8N4S0 544 aa25.61■■□□□ 1.69
CDR2-201ENST00000268383 BPIFA3Q9BQP9 254 aa25.61■■□□□ 1.69
CDR2-201ENST00000268383 CPDO75976 1380 aa25.61■■□□□ 1.69
CDR2-201ENST00000268383 ZMYM6O95789 1325 aa25.61■■□□□ 1.69
CDR2-201ENST00000268383 TMEM232C9JQI7 657 aa25.61■■□□□ 1.69
CDR2-201ENST00000268383 SH2B2O14492 632 aaPredicted RBP25.61■■□□□ 1.69
CDR2-201ENST00000268383 NFXL1Q6ZNB6 911 aa25.61■■□□□ 1.69
CDR2-201ENST00000268383 CHMP4CQ96CF2 233 aa25.61■■□□□ 1.69
CDR2-201ENST00000268383 IMPACTQ9P2X3 320 aa25.61■■□□□ 1.69
CDR2-201ENST00000268383 PCCAP05165 728 aaPredicted RBP25.6■■□□□ 1.69
CDR2-201ENST00000268383 CSF1RP07333 972 aa25.6■■□□□ 1.69
CDR2-201ENST00000268383 ERCC6LQ2NKX8 1250 aa25.6■■□□□ 1.69
CDR2-201ENST00000268383 AKAP11Q9UKA4 1901 aa25.6■■□□□ 1.69
CDR2-201ENST00000268383 C4AP0C0L4 1744 aa25.6■■□□□ 1.69
CDR2-201ENST00000268383 C4BP0C0L5 1744 aa25.6■■□□□ 1.69
CDR2-201ENST00000268383 CTDSPL2Q05D32 466 aa25.6■■□□□ 1.69
CDR2-201ENST00000268383 PTPAQ15257 358 aa25.6■■□□□ 1.69
CDR2-201ENST00000268383 FOXP4Q8IVH2 680 aaPredicted RBP25.6■■□□□ 1.69
CDR2-201ENST00000268383 MYH7P12883 1935 aa25.59■■□□□ 1.69
CDR2-201ENST00000268383 SLU7O95391 586 aaKnown RBP25.59■■□□□ 1.69
CDR2-201ENST00000268383 LONRF3Q496Y0 759 aa25.59■■□□□ 1.69
CDR2-201ENST00000268383 ZBTB38Q8NAP3 1195 aaPredicted RBP25.59■■□□□ 1.69
CDR2-201ENST00000268383 TTLL11Q8NHH1 800 aa25.59■■□□□ 1.69
CDR2-201ENST00000268383 GTPBP4Q9BZE4 634 aaKnown RBP25.59■■□□□ 1.69
CDR2-201ENST00000268383 UBR2Q8IWV8 1755 aa25.59■■□□□ 1.69
CDR2-201ENST00000268383 IL2RBP14784 551 aa25.59■■□□□ 1.69
CDR2-201ENST00000268383 KIF6Q6ZMV9 814 aa25.59■■□□□ 1.69
CDR2-201ENST00000268383 CMTR1Q8N1G2 835 aaKnown RBP25.59■■□□□ 1.69
CDR2-201ENST00000268383 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.59■■□□□ 1.69
CDR2-201ENST00000268383 TACC3Q9Y6A5 838 aa25.59■■□□□ 1.69
CDR2-201ENST00000268383 SERPINC1P01008 464 aa25.58■■□□□ 1.69
CDR2-201ENST00000268383 GUCY1A2P33402 732 aa25.58■■□□□ 1.69
CDR2-201ENST00000268383 UBASH3AP57075 661 aa25.58■■□□□ 1.69
CDR2-201ENST00000268383 GRIN1Q05586 938 aa25.58■■□□□ 1.69
CDR2-201ENST00000268383 METTL16Q86W50 562 aaKnown RBP25.58■■□□□ 1.69
CDR2-201ENST00000268383 TICAM2Q86XR7 235 aa25.58■■□□□ 1.69
CDR2-201ENST00000268383 CCDC150Q8NCX0 1101 aa25.58■■□□□ 1.69
CDR2-201ENST00000268383 ERO1AQ96HE7 468 aa25.58■■□□□ 1.69
CDR2-201ENST00000268383 MAP3K14Q99558 947 aa25.58■■□□□ 1.69
CDR2-201ENST00000268383 ZKSCAN3Q9BRR0 538 aa25.58■■□□□ 1.69
CDR2-201ENST00000268383 ST7Q9NRC1 585 aa25.58■■□□□ 1.69
CDR2-201ENST00000268383 CFAP100Q494V2 611 aa25.57■■□□□ 1.68
CDR2-201ENST00000268383 HOMER1Q86YM7 354 aa25.57■■□□□ 1.68
CDR2-201ENST00000268383 ZNF397Q8NF99 534 aaPredicted RBP25.57■■□□□ 1.68
CDR2-201ENST00000268383 FAM217BQ9NTX9 383 aaPredicted RBP25.57■■□□□ 1.68
CDR2-201ENST00000268383 TMOD3Q9NYL9 352 aa25.57■■□□□ 1.68
CDR2-201ENST00000268383 PDE4BQ07343 736 aa25.57■■□□□ 1.68
CDR2-201ENST00000268383 SLC26A6Q9BXS9 759 aa25.57■■□□□ 1.68
CDR2-201ENST00000268383 TPM4P67936 248 aa25.57■■□□□ 1.68
CDR2-201ENST00000268383 FANCLQ9NW38 375 aa25.57■■□□□ 1.68
CDR2-201ENST00000268383 HPSEQ9Y251 543 aa25.57■■□□□ 1.68
CDR2-201ENST00000268383 ZBTB43O43298 467 aa25.56■■□□□ 1.68
CDR2-201ENST00000268383 PDE6AP16499 860 aa25.56■■□□□ 1.68
CDR2-201ENST00000268383 NTRK3Q16288 839 aa25.56■■□□□ 1.68
CDR2-201ENST00000268383 IGDCC4Q8TDY8 1250 aa25.56■■□□□ 1.68
CDR2-201ENST00000268383 UBN2Q6ZU65 1347 aa25.56■■□□□ 1.68
CDR2-201ENST00000268383 GOLGA8AA7E2F4 631 aa25.56■■□□□ 1.68
CDR2-201ENST00000268383 CCDC102BQ68D86 513 aa25.56■■□□□ 1.68
CDR2-201ENST00000268383 FAM177A1Q8N128 213 aaPredicted RBP25.56■■□□□ 1.68
CDR2-201ENST00000268383 KCNJ14Q9UNX9 436 aa25.56■■□□□ 1.68
CDR2-201ENST00000268383 FANCGO15287 622 aa25.55■■□□□ 1.68
CDR2-201ENST00000268383 BMP6P22004 513 aa25.55■■□□□ 1.68
CDR2-201ENST00000268383 IARSP41252 1262 aaKnown RBP25.55■■□□□ 1.68
CDR2-201ENST00000268383 TMEM67Q5HYA8 995 aa25.55■■□□□ 1.68
CDR2-201ENST00000268383 RRP12Q5JTH9 1297 aaKnown RBP25.55■■□□□ 1.68
CDR2-201ENST00000268383 TMX1Q9H3N1 280 aa25.55■■□□□ 1.68
CDR2-201ENST00000268383 LY9Q9HBG7 655 aa25.55■■□□□ 1.68
CDR2-201ENST00000268383 DNAI1Q9UI46 699 aa25.55■■□□□ 1.68
CDR2-201ENST00000268383 TUBE1Q9UJT0 475 aa25.55■■□□□ 1.68
CDR2-201ENST00000268383 PIGBQ92521 554 aa25.55■■□□□ 1.68
CDR2-201ENST00000268383 UTP14AQ9BVJ6 771 aaKnown RBP25.55■■□□□ 1.68
CDR2-201ENST00000268383 ZNF446Q9NWS9 450 aa25.55■■□□□ 1.68
CDR2-201ENST00000268383 PCDHA5Q9Y5H7 936 aa25.55■■□□□ 1.68
CDR2-201ENST00000268383 STRCP1A6NGW2 1772 aa25.55■■□□□ 1.68
CDR2-201ENST00000268383 NKX1-1Q15270 411 aaPredicted RBP25.54■■□□□ 1.68
CDR2-201ENST00000268383 ZNF827Q17R98 1081 aa25.54■■□□□ 1.68
CDR2-201ENST00000268383 CADPS2Q86UW7 1296 aa25.54■■□□□ 1.68
CDR2-201ENST00000268383 NLRP10Q86W26 655 aa25.54■■□□□ 1.68
CDR2-201ENST00000268383 DDX60Q8IY21 1712 aaKnown RBP25.54■■□□□ 1.68
CDR2-201ENST00000268383 PARP4Q9UKK3 1724 aaKnown RBP25.54■■□□□ 1.68
CDR2-201ENST00000268383 BTBD18B2RXH4 712 aa25.54■■□□□ 1.68
CDR2-201ENST00000268383 ATP2B1P20020 1258 aa25.54■■□□□ 1.68
CDR2-201ENST00000268383 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.54■■□□□ 1.68
CDR2-201ENST00000268383 EPB41L4AQ9HCS5 686 aaPredicted RBP25.54■■□□□ 1.68
CDR2-201ENST00000268383 KCND1Q9NSA2 647 aa25.54■■□□□ 1.68
CDR2-201ENST00000268383 ZSWIM5Q9P217 1185 aa25.54■■□□□ 1.68
CDR2-201ENST00000268383 MORC2Q9Y6X9 1032 aaPredicted RBP25.54■■□□□ 1.68
CDR2-201ENST00000268383 GRAMD1CQ8IYS0 662 aa25.53■■□□□ 1.68
CDR2-201ENST00000268383 CNNM3Q8NE01 707 aa25.53■■□□□ 1.68
CDR2-201ENST00000268383 AIDAQ96BJ3 306 aa25.53■■□□□ 1.68
CDR2-201ENST00000268383 TOMM22Q9NS69 142 aa25.53■■□□□ 1.68
CDR2-201ENST00000268383 ANKRD18BA2A2Z9 1011 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 339.7 ms