RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 CCDC87Q9NVE4 849 aa26.2■■□□□ 1.79
MCF2L-201ENST00000261963 ZBTB22O15209 634 aa26.2■■□□□ 1.78
MCF2L-201ENST00000261963 POLR3DP05423 398 aaPredicted RBP26.2■■□□□ 1.78
MCF2L-201ENST00000261963 RASGRF1Q13972 1273 aa26.2■■□□□ 1.78
MCF2L-201ENST00000261963 CLIC4Q9Y696 253 aa26.2■■□□□ 1.78
MCF2L-201ENST00000261963 COL22A1Q8NFW1 1626 aaPredicted RBP26.2■■□□□ 1.78
MCF2L-201ENST00000261963 KINO60870 393 aaKnown RBP26.19■■□□□ 1.78
MCF2L-201ENST00000261963 ARAP2Q8WZ64 1704 aa26.19■■□□□ 1.78
MCF2L-201ENST00000261963 KIF28PB7ZC32 967 aa26.19■■□□□ 1.78
MCF2L-201ENST00000261963 CRKLP46109 303 aaKnown RBP26.19■■□□□ 1.78
MCF2L-201ENST00000261963 SENP2Q9HC62 589 aa26.19■■□□□ 1.78
MCF2L-201ENST00000261963 ZMYM6O95789 1325 aa26.19■■□□□ 1.78
MCF2L-201ENST00000261963 SLC5A1P13866 664 aa26.18■■□□□ 1.78
MCF2L-201ENST00000261963 MYSM1Q5VVJ2 828 aa26.18■■□□□ 1.78
MCF2L-201ENST00000261963 ADALQ6DHV7 355 aa26.18■■□□□ 1.78
MCF2L-201ENST00000261963 FMR1NBQ8N0W7 255 aaPredicted RBP26.18■■□□□ 1.78
MCF2L-201ENST00000261963 ZNF592Q92610 1267 aa26.18■■□□□ 1.78
MCF2L-201ENST00000261963 AIDAQ96BJ3 306 aa26.18■■□□□ 1.78
MCF2L-201ENST00000261963 EPB41L4AQ9HCS5 686 aaPredicted RBP26.18■■□□□ 1.78
MCF2L-201ENST00000261963 NEDD4P46934 1319 aa26.18■■□□□ 1.78
MCF2L-201ENST00000261963 C4AP0C0L4 1744 aa26.18■■□□□ 1.78
MCF2L-201ENST00000261963 C4BP0C0L5 1744 aa26.18■■□□□ 1.78
MCF2L-201ENST00000261963 B4E1Z4 1266 aa26.18■■□□□ 1.78
MCF2L-201ENST00000261963 CAMTA2O94983 1202 aa26.18■■□□□ 1.78
MCF2L-201ENST00000261963 ALX1Q15699 326 aa26.18■■□□□ 1.78
MCF2L-201ENST00000261963 STX1AQ16623 288 aa26.18■■□□□ 1.78
MCF2L-201ENST00000261963 MRPS27Q92552 414 aaKnown RBP26.18■■□□□ 1.78
MCF2L-201ENST00000261963 UTP14AQ9BVJ6 771 aaKnown RBP26.18■■□□□ 1.78
MCF2L-201ENST00000261963 POLR3EQ9NVU0 708 aa26.18■■□□□ 1.78
MCF2L-201ENST00000261963 ROBO1Q9Y6N7 1651 aa26.17■■□□□ 1.78
MCF2L-201ENST00000261963 A0A1W2PQ27 194 aa26.17■■□□□ 1.78
MCF2L-201ENST00000261963 A0A1W2PQ64 194 aa26.17■■□□□ 1.78
MCF2L-201ENST00000261963 A0A1W2PQD8 194 aa26.17■■□□□ 1.78
MCF2L-201ENST00000261963 KIF23Q02241 960 aaPredicted RBP26.17■■□□□ 1.78
MCF2L-201ENST00000261963 BRAPQ7Z569 592 aa26.17■■□□□ 1.78
MCF2L-201ENST00000261963 IRX5P78411 483 aaPredicted RBP26.17■■□□□ 1.78
MCF2L-201ENST00000261963 KMT5BQ4FZB7 885 aa26.17■■□□□ 1.78
MCF2L-201ENST00000261963 TIGD1Q96MW7 591 aa26.17■■□□□ 1.78
MCF2L-201ENST00000261963 ATP6V1AP38606 617 aa26.16■■□□□ 1.78
MCF2L-201ENST00000261963 APOA5Q6Q788 366 aa26.16■■□□□ 1.78
MCF2L-201ENST00000261963 CACTINQ8WUQ7 758 aaKnown RBP26.16■■□□□ 1.78
MCF2L-201ENST00000261963 ACSBG1Q96GR2 724 aa26.16■■□□□ 1.78
MCF2L-201ENST00000261963 CLIP2Q9UDT6 1046 aa26.16■■□□□ 1.78
MCF2L-201ENST00000261963 A0A087WWV3 80 aa26.16■■□□□ 1.78
MCF2L-201ENST00000261963 YEATS4O95619 227 aa26.16■■□□□ 1.78
MCF2L-201ENST00000261963 MAGEB6Q8N7X4 407 aa26.16■■□□□ 1.78
MCF2L-201ENST00000261963 AIFM3Q96NN9 605 aa26.16■■□□□ 1.78
MCF2L-201ENST00000261963 MPHOSPH8Q99549 860 aa26.16■■□□□ 1.78
MCF2L-201ENST00000261963 INCENPQ9NQS7 918 aa26.16■■□□□ 1.78
MCF2L-201ENST00000261963 AHDC1Q5TGY3 1603 aaPredicted RBP26.15■■□□□ 1.78
MCF2L-201ENST00000261963 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.15■■□□□ 1.78
MCF2L-201ENST00000261963 RXRAP19793 462 aa26.15■■□□□ 1.78
MCF2L-201ENST00000261963 METAP2P50579 478 aaKnown RBP eCLIP26.15■■□□□ 1.78
MCF2L-201ENST00000261963 ITPK1Q13572 414 aa26.15■■□□□ 1.78
MCF2L-201ENST00000261963 STK38Q15208 465 aa26.15■■□□□ 1.78
MCF2L-201ENST00000261963 IGDCC4Q8TDY8 1250 aa26.15■■□□□ 1.78
MCF2L-201ENST00000261963 SPATA31A1Q5TZJ5 1347 aa26.15■■□□□ 1.78
MCF2L-201ENST00000261963 A0A1B0GVL5 298 aa26.15■■□□□ 1.78
MCF2L-201ENST00000261963 PATL2C9JE40 543 aaKnown RBP26.15■■□□□ 1.78
MCF2L-201ENST00000261963 MBD4O95243 580 aa26.15■■□□□ 1.78
MCF2L-201ENST00000261963 CDC27P30260 824 aa26.15■■□□□ 1.78
MCF2L-201ENST00000261963 KCNG4Q8TDN1 519 aa26.15■■□□□ 1.78
MCF2L-201ENST00000261963 CDCA7Q9BWT1 371 aaPredicted RBP26.15■■□□□ 1.78
MCF2L-201ENST00000261963 FAM53CQ9NYF3 392 aa26.15■■□□□ 1.78
MCF2L-201ENST00000261963 TACC3Q9Y6A5 838 aa26.15■■□□□ 1.78
MCF2L-201ENST00000261963 LOC102724428A0A0B4J2F2 783 aa26.14■■□□□ 1.78
MCF2L-201ENST00000261963 NDUFA8P51970 172 aa26.14■■□□□ 1.78
MCF2L-201ENST00000261963 SIK1P57059 783 aa26.14■■□□□ 1.78
MCF2L-201ENST00000261963 DDB1Q16531 1140 aa26.14■■□□□ 1.78
MCF2L-201ENST00000261963 IFNL3Q8IZI9 196 aa26.14■■□□□ 1.78
MCF2L-201ENST00000261963 A0A0G2JS52 829 aa26.14■■□□□ 1.77
MCF2L-201ENST00000261963 FAM193AP78312 1265 aa26.14■■□□□ 1.77
MCF2L-201ENST00000261963 MAP3K12Q12852 859 aa26.14■■□□□ 1.77
MCF2L-201ENST00000261963 RGS22Q8NE09 1264 aa26.14■■□□□ 1.77
MCF2L-201ENST00000261963 ERCC4Q92889 916 aaPredicted RBP26.14■■□□□ 1.77
MCF2L-201ENST00000261963 TMEM87BQ96K49 555 aa26.14■■□□□ 1.77
MCF2L-201ENST00000261963 SPTLC2O15270 562 aa26.13■■□□□ 1.77
MCF2L-201ENST00000261963 PARP10Q53GL7 1025 aa26.13■■□□□ 1.77
MCF2L-201ENST00000261963 MARCH10Q8NA82 808 aaPredicted RBP26.13■■□□□ 1.77
MCF2L-201ENST00000261963 ARMT1Q9H993 441 aa26.13■■□□□ 1.77
MCF2L-201ENST00000261963 LY9Q9HBG7 655 aa26.13■■□□□ 1.77
MCF2L-201ENST00000261963 NTSR2O95665 410 aa26.13■■□□□ 1.77
MCF2L-201ENST00000261963 ZNF215Q9UL58 517 aaPredicted RBP26.13■■□□□ 1.77
MCF2L-201ENST00000261963 BCAMP50895 628 aa26.12■■□□□ 1.77
MCF2L-201ENST00000261963 SF3A1Q15459 793 aaKnown RBP26.12■■□□□ 1.77
MCF2L-201ENST00000261963 SARM1Q6SZW1 724 aa26.12■■□□□ 1.77
MCF2L-201ENST00000261963 ALG1Q9BT22 464 aa26.12■■□□□ 1.77
MCF2L-201ENST00000261963 DOCK2Q92608 1830 aa26.12■■□□□ 1.77
MCF2L-201ENST00000261963 CCDC152Q4G0S7 254 aa26.12■■□□□ 1.77
MCF2L-201ENST00000261963 SGMS1Q86VZ5 419 aa26.12■■□□□ 1.77
MCF2L-201ENST00000261963 MICU3Q86XE3 530 aa26.12■■□□□ 1.77
MCF2L-201ENST00000261963 FAM217BQ9NTX9 383 aaPredicted RBP26.12■■□□□ 1.77
MCF2L-201ENST00000261963 CALCOCO1Q9P1Z2 691 aa26.12■■□□□ 1.77
MCF2L-201ENST00000261963 GSG1L2A8MUP6 293 aa26.11■■□□□ 1.77
MCF2L-201ENST00000261963 CDC25BP30305 580 aa26.11■■□□□ 1.77
MCF2L-201ENST00000261963 CTDSPL2Q05D32 466 aa26.11■■□□□ 1.77
MCF2L-201ENST00000261963 NTRK3Q16288 839 aa26.11■■□□□ 1.77
MCF2L-201ENST00000261963 ANO1Q5XXA6 986 aa26.11■■□□□ 1.77
MCF2L-201ENST00000261963 DHX40Q8IX18 779 aaKnown RBP26.11■■□□□ 1.77
MCF2L-201ENST00000261963 PHKBQ93100 1093 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms