RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 NKX2-3Q8TAU0 364 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 RABGGTAQ92696 567 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 TBC1D31Q96DN5 1066 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 ERO1AQ96HE7 468 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 PARK7Q99497 189 aaKnown RBP4.55□□□□□ -1.68
RNF38-201ENST00000259605 ANO3Q9BYT9 981 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 ANGEL1Q9UNK9 670 aaKnown RBP4.55□□□□□ -1.68
RNF38-201ENST00000259605 TTF2Q9UNY4 1162 aaKnown RBP4.55□□□□□ -1.68
RNF38-201ENST00000259605 FAN1Q9Y2M0 1017 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 SOS1Q07889 1333 aaPredicted RBP4.55□□□□□ -1.68
RNF38-201ENST00000259605 ZNF233A6NK53 670 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 ERVV-2B6SEH9 535 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 PPEF1O14829 653 aaPredicted RBP4.55□□□□□ -1.68
RNF38-201ENST00000259605 EIF3JO75822 258 aaKnown RBP4.55□□□□□ -1.68
RNF38-201ENST00000259605 PRPF6O94906 941 aaKnown RBP4.55□□□□□ -1.68
RNF38-201ENST00000259605 VEGFAP15692 232 aaPredicted RBP4.55□□□□□ -1.68
RNF38-201ENST00000259605 SSTR3P32745 418 aaPredicted RBP4.55□□□□□ -1.68
RNF38-201ENST00000259605 FOXD4L6Q3SYB3 417 aaPredicted RBP4.55□□□□□ -1.68
RNF38-201ENST00000259605 FOXD4L3Q6VB84 417 aaPredicted RBP4.55□□□□□ -1.68
RNF38-201ENST00000259605 KRT26Q7Z3Y9 468 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 HEATR3Q7Z4Q2 680 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 SRGAP1Q7Z6B7 1085 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 TMEM57Q8N5G2 664 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 PPP1R14CQ8TAE6 165 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 KIFC2Q96AC6 838 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 MASTLQ96GX5 879 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 C8orf76Q96K31 380 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 NUP62CLQ9H1M0 184 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 DONSONQ9NYP3 566 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 MSRAQ9UJ68 235 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 FNDC3AQ9Y2H6 1198 aaKnown RBP4.55□□□□□ -1.68
RNF38-201ENST00000259605 MAP3K2Q9Y2U5 619 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 YTHDC2Q9H6S0 1430 aaKnown RBP4.55□□□□□ -1.68
RNF38-201ENST00000259605 SPDYE16A6NNV3 312 aaPredicted RBP4.55□□□□□ -1.68
RNF38-201ENST00000259605 POTEB2H3BUK9 544 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 MBD3O95983 291 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 PDE6AP16499 860 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 ABCD1P33897 745 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 BCAMP50895 628 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 NEK4P51957 841 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 RPS8P62241 208 aaKnown RBP4.55□□□□□ -1.68
RNF38-201ENST00000259605 SPDYE2Q495Y8 402 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 ARHGEF16Q5VV41 709 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 PGBD3Q8N328 593 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 RBM46Q8TBY0 533 aaKnown RBP4.55□□□□□ -1.68
RNF38-201ENST00000259605 LZTS2Q9BRK4 669 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 MAK16Q9BXY0 300 aaKnown RBP4.55□□□□□ -1.68
RNF38-201ENST00000259605 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.55□□□□□ -1.68
RNF38-201ENST00000259605 V9GYY5 206 aaPredicted RBP4.55□□□□□ -1.68
RNF38-201ENST00000259605 A2MP01023 1474 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 NCOA1Q15788 1441 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 PRPF38AQ8NAV1 312 aaKnown RBP4.55□□□□□ -1.68
RNF38-201ENST00000259605 IP6K1Q92551 441 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 KIFAP3Q92845 792 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 PDRG1Q9NUG6 133 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 EXOC1Q9NV70 894 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 DOLKQ9UPQ8 538 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 FLT4P35916 1363 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 KIF14Q15058 1648 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 TRAPPC8Q9Y2L5 1435 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 ARHGEF35A5YM69 484 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 WDR64B1ANS9 1081 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 HEXIM1O94992 359 aaKnown RBP4.54□□□□□ -1.68
RNF38-201ENST00000259605 ATP2A2P16615 1042 aaKnown RBP4.54□□□□□ -1.68
RNF38-201ENST00000259605 MTIF2P46199 727 aaKnown RBP4.54□□□□□ -1.68
RNF38-201ENST00000259605 ARL4DP49703 201 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 MAP7Q14244 749 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 KRT33BQ14525 404 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 VEPH1Q14D04 833 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 TTLL5Q6EMB2 1281 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 XAGE3Q8WTP9 111 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 ZBTB21Q9ULJ3 1066 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 EHBP1L1Q8N3D4 1523 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 PHLPP2Q6ZVD8 1323 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 BLMP54132 1417 aaPredicted RBP4.54□□□□□ -1.68
RNF38-201ENST00000259605 POLA1P09884 1462 aaPredicted RBP4.54□□□□□ -1.68
RNF38-201ENST00000259605 FLOT1O75955 427 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 SERPINB2P05120 415 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 FCGRTP55899 365 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 ZYXQ15942 572 aaKnown RBP4.54□□□□□ -1.68
RNF38-201ENST00000259605 TDRD12Q587J7 1177 aaKnown RBP4.54□□□□□ -1.68
RNF38-201ENST00000259605 LARP1BQ659C4 914 aaKnown RBP4.54□□□□□ -1.68
RNF38-201ENST00000259605 METTL13Q8N6R0 699 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 ARRDC4Q8NCT1 418 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 DEPTORQ8TB45 409 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 CCDC17Q96LX7 622 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 CFAP57Q96MR6 1250 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 SPAG5Q96R06 1193 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 MED10Q9BTT4 135 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 KIF9Q9HAQ2 790 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 USP40Q9NVE5 1235 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 USP25Q9UHP3 1055 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 POLIQ9UNA4 740 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 ITM2BQ9Y287 266 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 MRVI1Q9Y6F6 885 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 ARHGEF11O15085 1522 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 ERCC6L2Q5T890 1561 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 HUNKP57058 714 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 RC3H1Q5TC82 1133 aaKnown RBP4.54□□□□□ -1.68
RNF38-201ENST00000259605 SPATA24Q86W54 205 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms