RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 DIXDC1Q155Q3 683 aa10.19□□□□□ -0.78
CALCOCO2-201ENST00000258947 TRIM44Q96DX7 344 aaPredicted RBP10.19□□□□□ -0.78
CALCOCO2-201ENST00000258947 GADD45BO75293 160 aaPredicted RBP10.19□□□□□ -0.78
CALCOCO2-201ENST00000258947 ATP2B1P20020 1258 aa10.19□□□□□ -0.78
CALCOCO2-201ENST00000258947 PDIA3P30101 505 aaKnown RBP10.19□□□□□ -0.78
CALCOCO2-201ENST00000258947 RBM5P52756 815 aaKnown RBP eCLIP10.19□□□□□ -0.78
CALCOCO2-201ENST00000258947 AKNAD1Q5T1N1 836 aa10.19□□□□□ -0.78
CALCOCO2-201ENST00000258947 CNNM2Q9H8M5 875 aa10.19□□□□□ -0.78
CALCOCO2-201ENST00000258947 STK32BQ9NY57 414 aa10.19□□□□□ -0.78
CALCOCO2-201ENST00000258947 TJP1Q07157 1748 aa10.19□□□□□ -0.78
CALCOCO2-201ENST00000258947 USP17L12C9JPN9 530 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 USP17L21D6R901 530 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 RAD21O60216 631 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 BAG3O95817 575 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 IQCA1Q86XH1 822 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 COL23A1Q86Y22 540 aaPredicted RBP10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 MKNK2Q9HBH9 465 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 GPSM2P81274 684 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 PPARAQ07869 468 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 ZNF827Q17R98 1081 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 WDR66Q8TBY9 1149 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 ESR2Q92731 530 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 LEMD3Q9Y2U8 911 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 TSPY2A6NKD2 308 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 GSG1L2A8MUP6 293 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 PFKFB2O60825 505 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 GTF2IP78347 998 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 DDR1Q08345 913 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 DOK7Q18PE1 504 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 MFSD14BQ5SR56 506 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 DPP8Q6V1X1 898 aaPredicted RBP10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 RTL9Q8NET4 1388 aa10.18□□□□□ -0.78
CALCOCO2-201ENST00000258947 PPEF1O14829 653 aaPredicted RBP10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 CDKL5O76039 1030 aa10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 ADD1P35611 737 aaKnown RBP10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 TICAM2Q86XR7 235 aa10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 PHKBQ93100 1093 aa10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 SLC26A6Q9BXS9 759 aa10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 GRPEL1Q9HAV7 217 aa10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 SAP30BPQ9UHR5 308 aaKnown RBP10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 NEDD4P46934 1319 aa10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 BBOX1O75936 387 aa10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 LDHCP07864 332 aa10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 ADGRA1Q86SQ6 560 aa10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 TRIM22Q8IYM9 498 aa10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 EPB41L4AQ9HCS5 686 aaPredicted RBP10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 IARSP41252 1262 aaKnown RBP10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 ME1P48163 572 aa10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 MRE11P49959 708 aa10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 PICALMQ13492 652 aa10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 ZSCAN23Q3MJ62 389 aa10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 OLFM4Q6UX06 510 aa10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 MPNDQ8N594 471 aa10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 FLAD1Q8NFF5 587 aa10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 ZSWIM5Q9P217 1185 aa10.17□□□□□ -0.78
CALCOCO2-201ENST00000258947 ATP2B4P23634 1241 aa10.16□□□□□ -0.78
CALCOCO2-201ENST00000258947 ST3GAL1Q11201 340 aa10.16□□□□□ -0.78
CALCOCO2-201ENST00000258947 ZRSR1Q15695 479 aaKnown RBP10.16□□□□□ -0.78
CALCOCO2-201ENST00000258947 CYB5R4Q7L1T6 521 aa10.16□□□□□ -0.78
CALCOCO2-201ENST00000258947 CMTR1Q8N1G2 835 aaKnown RBP10.16□□□□□ -0.78
CALCOCO2-201ENST00000258947 PROM2Q8N271 834 aa10.16□□□□□ -0.78
CALCOCO2-201ENST00000258947 SEMA3EO15041 775 aa10.16□□□□□ -0.78
CALCOCO2-201ENST00000258947 EXOSC10Q01780 885 aaKnown RBP10.16□□□□□ -0.78
CALCOCO2-201ENST00000258947 CAMK4Q16566 473 aa10.16□□□□□ -0.78
CALCOCO2-201ENST00000258947 FBXO33Q7Z6M2 555 aa10.16□□□□□ -0.78
CALCOCO2-201ENST00000258947 MAPKAPK5Q8IW41 473 aa10.16□□□□□ -0.78
CALCOCO2-201ENST00000258947 MB21D2Q8IYB1 491 aaPredicted RBP10.16□□□□□ -0.78
CALCOCO2-201ENST00000258947 NSUN7Q8NE18 718 aaKnown RBP10.16□□□□□ -0.78
CALCOCO2-201ENST00000258947 GPT2Q8TD30 523 aa10.16□□□□□ -0.78
CALCOCO2-201ENST00000258947 ZNF274Q96GC6 653 aaPredicted RBP10.16□□□□□ -0.78
CALCOCO2-201ENST00000258947 TCRBV5S4A2TA0A5A2 114 aa10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 H0YIN7 160 aa10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 PDE6BP35913 854 aa10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 GSTO1P78417 241 aa10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 PDE4BQ07343 736 aa10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 SAFBQ15424 915 aaKnown RBP eCLIP10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 EZH2Q15910 746 aaKnown RBP10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 IFIT1BQ5T764 474 aaKnown RBP10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 C2CD5Q86YS7 1000 aa10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 TGFBRAP1Q8WUH2 860 aa10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 TMEM87BQ96K49 555 aa10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 PDIA4P13667 645 aaKnown RBP10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 NASPP49321 788 aaPredicted RBP10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 STK38Q15208 465 aa10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 FAM47AQ5JRC9 791 aa10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 ALG1Q9BT22 464 aa10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 PANK2Q9BZ23 570 aa10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 SCAND2PQ9GZW5 306 aaPredicted RBP10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 CFAP45Q9UL16 551 aa10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 STX8Q9UNK0 236 aa10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 BTAF1O14981 1849 aa10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 POLRMTO00411 1230 aaKnown RBP10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 ALDH1B1P30837 517 aa10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 RTN1Q16799 776 aa10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 NSUN4Q96CB9 384 aaKnown RBP10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 IL17RAQ96F46 866 aa10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 ZNF396Q96N95 335 aaPredicted RBP10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 LLPHQ9BRT6 129 aaKnown RBP10.15□□□□□ -0.78
CALCOCO2-201ENST00000258947 UBE2HP62256 183 aa10.14□□□□□ -0.79
CALCOCO2-201ENST00000258947 ATP2B2Q01814 1243 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms