RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 TMEM87BQ96K49 555 aa12.87□□□□□ -0.35
NIN-201ENST00000245441 TNNI2P48788 182 aa12.87□□□□□ -0.35
NIN-201ENST00000245441 CWF19L2Q2TBE0 894 aaKnown RBP12.87□□□□□ -0.35
NIN-201ENST00000245441 KCNH3Q9ULD8 1083 aa12.87□□□□□ -0.35
NIN-201ENST00000245441 DEXIO95424 95 aa12.87□□□□□ -0.35
NIN-201ENST00000245441 IFT74Q96LB3 600 aa12.87□□□□□ -0.35
NIN-201ENST00000245441 EDC4Q6P2E9 1401 aaKnown RBP12.87□□□□□ -0.35
NIN-201ENST00000245441 SEL1L2Q5TEA6 688 aa12.87□□□□□ -0.35
NIN-201ENST00000245441 TSPYL6Q8N831 410 aa12.87□□□□□ -0.35
NIN-201ENST00000245441 ZRANB1Q9UGI0 708 aa12.87□□□□□ -0.35
NIN-201ENST00000245441 NIP7Q9Y221 180 aaKnown RBP eCLIP12.87□□□□□ -0.35
NIN-201ENST00000245441 ZMYM3Q14202 1370 aa12.87□□□□□ -0.35
NIN-201ENST00000245441 TERF1P54274 439 aa12.87□□□□□ -0.35
NIN-201ENST00000245441 DNAJC21Q5F1R6 531 aaKnown RBP12.87□□□□□ -0.35
NIN-201ENST00000245441 AFAP1L1Q8TED9 768 aa12.87□□□□□ -0.35
NIN-201ENST00000245441 CSRNP2Q9H175 543 aa12.87□□□□□ -0.35
NIN-201ENST00000245441 MAP3K9P80192 1104 aa12.86□□□□□ -0.35
NIN-201ENST00000245441 RAB3IL1Q8TBN0 382 aa12.86□□□□□ -0.35
NIN-201ENST00000245441 ANO1Q5XXA6 986 aa12.86□□□□□ -0.35
NIN-201ENST00000245441 SV2BQ7L1I2 683 aa12.86□□□□□ -0.35
NIN-201ENST00000245441 SMAP1Q8IYB5 467 aaPredicted RBP12.86□□□□□ -0.35
NIN-201ENST00000245441 CCDC63Q8NA47 563 aa12.86□□□□□ -0.35
NIN-201ENST00000245441 RASSF4Q9H2L5 321 aa12.86□□□□□ -0.35
NIN-201ENST00000245441 ASXL2Q76L83 1435 aa12.86□□□□□ -0.35
NIN-201ENST00000245441 ACTN4O43707 911 aaKnown RBP12.86□□□□□ -0.35
NIN-201ENST00000245441 RGS22Q8NE09 1264 aa12.86□□□□□ -0.35
NIN-201ENST00000245441 UBLCP1Q8WVY7 318 aaPredicted RBP12.86□□□□□ -0.35
NIN-201ENST00000245441 DCAF5Q96JK2 942 aa12.86□□□□□ -0.35
NIN-201ENST00000245441 PHACTR3Q96KR7 559 aa12.86□□□□□ -0.35
NIN-201ENST00000245441 NAP1L4Q99733 375 aaKnown RBP12.86□□□□□ -0.35
NIN-201ENST00000245441 CTNND2Q9UQB3 1225 aa12.86□□□□□ -0.35
NIN-201ENST00000245441 EPB41P11171 864 aaKnown RBP12.86□□□□□ -0.35
NIN-201ENST00000245441 CCDC25Q86WR0 208 aa12.86□□□□□ -0.35
NIN-201ENST00000245441 RSRC1Q96IZ7 334 aaKnown RBP12.86□□□□□ -0.35
NIN-201ENST00000245441 ABCA5Q8WWZ7 1642 aa12.86□□□□□ -0.35
NIN-201ENST00000245441 ZBTB7BO15156 539 aaPredicted RBP12.86□□□□□ -0.35
NIN-201ENST00000245441 CHRNA2Q15822 529 aa12.86□□□□□ -0.35
NIN-201ENST00000245441 TMEM87AQ8NBN3 555 aa12.86□□□□□ -0.35
NIN-201ENST00000245441 MYRIPQ8NFW9 859 aa12.86□□□□□ -0.35
NIN-201ENST00000245441 TMEM110-MUSTN1A8MSY1 372 aa12.86□□□□□ -0.35
NIN-201ENST00000245441 NCBP1Q09161 790 aaKnown RBP12.86□□□□□ -0.35
NIN-201ENST00000245441 KIFAP3Q92845 792 aa12.86□□□□□ -0.35
NIN-201ENST00000245441 NKIRAS1Q9NYS0 192 aa12.86□□□□□ -0.35
NIN-201ENST00000245441 UTP11Q9Y3A2 253 aaKnown RBP12.86□□□□□ -0.35
NIN-201ENST00000245441 CFAP74Q9C0B2 1584 aa12.85□□□□□ -0.35
NIN-201ENST00000245441 DAAM2Q86T65 1068 aa12.85□□□□□ -0.35
NIN-201ENST00000245441 TRIM7Q9C029 511 aa12.85□□□□□ -0.35
NIN-201ENST00000245441 HOXB7P09629 217 aa12.85□□□□□ -0.35
NIN-201ENST00000245441 PARP1P09874 1014 aaKnown RBP12.85□□□□□ -0.35
NIN-201ENST00000245441 LACTBP83111 547 aaPredicted RBP12.85□□□□□ -0.35
NIN-201ENST00000245441 ANKRD2Q9GZV1 360 aa12.85□□□□□ -0.35
NIN-201ENST00000245441 CLSTN2Q9H4D0 955 aa12.85□□□□□ -0.35
NIN-201ENST00000245441 YTHDC2Q9H6S0 1430 aaKnown RBP12.85□□□□□ -0.35
NIN-201ENST00000245441 LDHBP07195 334 aaKnown RBP12.85□□□□□ -0.35
NIN-201ENST00000245441 DCAF17Q5H9S7 520 aaPredicted RBP12.85□□□□□ -0.35
NIN-201ENST00000245441 C8orf74Q6P047 294 aa12.85□□□□□ -0.35
NIN-201ENST00000245441 CERS3Q8IU89 383 aa12.85□□□□□ -0.35
NIN-201ENST00000245441 TCHPQ9BT92 498 aa12.85□□□□□ -0.35
NIN-201ENST00000245441 GOLGA4Q13439 2230 aaKnown RBP12.85□□□□□ -0.35
NIN-201ENST00000245441 IBTKQ9P2D0 1353 aaPredicted RBP12.85□□□□□ -0.35
NIN-201ENST00000245441 MAP7D1Q3KQU3 841 aa12.85□□□□□ -0.35
NIN-201ENST00000245441 SERPINA10Q9UK55 444 aa12.85□□□□□ -0.35
NIN-201ENST00000245441 POLR2DO15514 142 aaKnown RBP12.85□□□□□ -0.35
NIN-201ENST00000245441 IFT20Q8IY31 132 aa12.85□□□□□ -0.35
NIN-201ENST00000245441 GLT8D2Q9H1C3 349 aa12.85□□□□□ -0.35
NIN-201ENST00000245441 KDM2BQ8NHM5 1336 aa12.85□□□□□ -0.35
NIN-201ENST00000245441 ARHGAP6O43182 974 aa12.85□□□□□ -0.35
NIN-201ENST00000245441 NOC4LQ9BVI4 516 aaKnown RBP12.85□□□□□ -0.35
NIN-201ENST00000245441 NUP58Q9BVL2 599 aa12.85□□□□□ -0.35
NIN-201ENST00000245441 SLC27A2O14975 620 aa12.85□□□□□ -0.35
NIN-201ENST00000245441 UBL4BQ8N7F7 174 aa12.85□□□□□ -0.35
NIN-201ENST00000245441 SBNO2Q9Y2G9 1366 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 PCDH11XQ9BZA7 1347 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 PCDH11YQ9BZA8 1340 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 ZNF75DP51815 510 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 PICALMQ13492 652 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 CLUL1Q15846 466 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 MIGA1Q8NAN2 632 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 DDX23Q9BUQ8 820 aaKnown RBP12.84□□□□□ -0.35
NIN-201ENST00000245441 RBSNQ9H1K0 784 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 ZNF202O95125 648 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 TBC1D8BQ0IIM8 1120 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 ZNF622Q969S3 477 aaKnown RBP eCLIP12.84□□□□□ -0.35
NIN-201ENST00000245441 SSH2Q76I76 1423 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 CUTAO60888 179 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 IL2RBP14784 551 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 MLKLQ8NB16 471 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 CCDC110Q8TBZ0 833 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 ATP7AQ04656 1500 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 TRAF5O00463 557 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 GBP6Q6ZN66 633 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 SIRT1Q96EB6 747 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 ANAPC4Q9UJX5 808 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 NOX5Q96PH1 765 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 IRS4O14654 1257 aaPredicted RBP12.84□□□□□ -0.35
NIN-201ENST00000245441 ARL1P40616 181 aaPredicted RBP12.84□□□□□ -0.35
NIN-201ENST00000245441 INF2Q27J81 1249 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 PSMD1Q99460 953 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 CCDC160A6NGH7 325 aa12.84□□□□□ -0.35
NIN-201ENST00000245441 PPP2R5BQ15173 497 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms