RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 ADALQ6DHV7 355 aa9.09□□□□□ -0.95
SCG3-201ENST00000220478 LINC00301Q8NCQ3 95 aa9.09□□□□□ -0.95
SCG3-201ENST00000220478 IL17REQ8NFR9 667 aa9.09□□□□□ -0.95
SCG3-201ENST00000220478 MED15Q96RN5 788 aa9.09□□□□□ -0.95
SCG3-201ENST00000220478 CLIC4Q9Y696 253 aa9.09□□□□□ -0.95
SCG3-201ENST00000220478 BIN1O00499 593 aa9.09□□□□□ -0.95
SCG3-201ENST00000220478 KINO60870 393 aaKnown RBP9.09□□□□□ -0.95
SCG3-201ENST00000220478 ABL1P00519 1130 aa9.09□□□□□ -0.95
SCG3-201ENST00000220478 MYBPC2Q14324 1141 aa9.09□□□□□ -0.95
SCG3-201ENST00000220478 MTF1Q14872 753 aa9.09□□□□□ -0.95
SCG3-201ENST00000220478 SMYD5Q6GMV2 418 aa9.09□□□□□ -0.95
SCG3-201ENST00000220478 LRRC2Q9BYS8 371 aa9.09□□□□□ -0.95
SCG3-201ENST00000220478 RTEL1Q9NZ71 1219 aa9.09□□□□□ -0.95
SCG3-201ENST00000220478 TUBE1Q9UJT0 475 aa9.09□□□□□ -0.95
SCG3-201ENST00000220478 METP08581 1390 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 IGSF1Q8N6C5 1336 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 CCDC194A0A1B0GVG4 234 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 CCDC189A1A4V9 331 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 CYP21A2P08686 494 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 VSNL1P62760 191 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 MRPS27Q92552 414 aaKnown RBP9.08□□□□□ -0.96
SCG3-201ENST00000220478 NUDT16Q96DE0 195 aaKnown RBP9.08□□□□□ -0.96
SCG3-201ENST00000220478 EDC3Q96F86 508 aaKnown RBP9.08□□□□□ -0.96
SCG3-201ENST00000220478 STK31Q9BXU1 1019 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 A2ML1A8K2U0 1454 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 CEMIPQ8WUJ3 1361 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 PALLDQ8WX93 1383 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 NUTM2FA1L443 756 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 PPFIA3O75145 1194 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 PDE4BQ07343 736 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 NUTM2GQ5VZR2 741 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 FOXP4Q8IVH2 680 aaPredicted RBP9.08□□□□□ -0.96
SCG3-201ENST00000220478 GOLGA1Q92805 767 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 CXorf56Q9H5V9 222 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 SIPA1L3O60292 1781 aaPredicted RBP9.08□□□□□ -0.96
SCG3-201ENST00000220478 SHOX2O60902 331 aaPredicted RBP9.08□□□□□ -0.96
SCG3-201ENST00000220478 MCTP2Q6DN12 878 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 MMS22LQ6ZRQ5 1243 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 TSHZ1Q6ZSZ6 1077 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 ERC1Q8IUD2 1116 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 CNNM3Q8NE01 707 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 PPM1EQ8WY54 764 aa9.08□□□□□ -0.96
SCG3-201ENST00000220478 NAT10Q9H0A0 1025 aaKnown RBP9.08□□□□□ -0.96
SCG3-201ENST00000220478 USP54Q70EL1 1684 aa9.07□□□□□ -0.96
SCG3-201ENST00000220478 PTPDC1A2A3K4 754 aa9.07□□□□□ -0.96
SCG3-201ENST00000220478 EXOC5O00471 708 aa9.07□□□□□ -0.96
SCG3-201ENST00000220478 ARHGAP6O43182 974 aa9.07□□□□□ -0.96
SCG3-201ENST00000220478 WDHD1O75717 1129 aaPredicted RBP9.07□□□□□ -0.96
SCG3-201ENST00000220478 CCDC172P0C7W6 258 aa9.07□□□□□ -0.96
SCG3-201ENST00000220478 RFX1P22670 979 aa9.07□□□□□ -0.96
SCG3-201ENST00000220478 TADA2BQ86TJ2 420 aa9.07□□□□□ -0.96
SCG3-201ENST00000220478 CEP89Q96ST8 783 aa9.07□□□□□ -0.96
SCG3-201ENST00000220478 DESI2Q9BSY9 194 aa9.07□□□□□ -0.96
SCG3-201ENST00000220478 TEX13AQ9BXU3 409 aaPredicted RBP9.07□□□□□ -0.96
SCG3-201ENST00000220478 SIL1Q9H173 461 aa9.07□□□□□ -0.96
SCG3-201ENST00000220478 RYDENQ9NUL5 291 aaKnown RBP9.07□□□□□ -0.96
SCG3-201ENST00000220478 TECPR2O15040 1411 aa9.07□□□□□ -0.96
SCG3-201ENST00000220478 SBNO1A3KN83 1393 aa9.07□□□□□ -0.96
SCG3-201ENST00000220478 CARMIL3Q8ND23 1372 aa9.07□□□□□ -0.96
SCG3-201ENST00000220478 RGPD2P0DJD1 1756 aa9.07□□□□□ -0.96
SCG3-201ENST00000220478 LMO7Q8WWI1 1683 aa9.07□□□□□ -0.96
SCG3-201ENST00000220478 GNG11P61952 73 aa9.07□□□□□ -0.96
SCG3-201ENST00000220478 EXOSC10Q01780 885 aaKnown RBP9.07□□□□□ -0.96
SCG3-201ENST00000220478 CCDC73Q6ZRK6 1079 aa9.07□□□□□ -0.96
SCG3-201ENST00000220478 SRGAP1Q7Z6B7 1085 aa9.07□□□□□ -0.96
SCG3-201ENST00000220478 LLPHQ9BRT6 129 aaKnown RBP9.07□□□□□ -0.96
SCG3-201ENST00000220478 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.07□□□□□ -0.96
SCG3-201ENST00000220478 KIF28PB7ZC32 967 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 CASP8Q14790 479 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 ATL3Q6DD88 541 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 ISM2Q6H9L7 571 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 PARP9Q8IXQ6 854 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 NCOA5Q9HCD5 579 aaKnown RBP9.06□□□□□ -0.96
SCG3-201ENST00000220478 DONSONQ9NYP3 566 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 HMG20BQ9P0W2 317 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 CEP83Q9Y592 693 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 FER1L4A9Z1Z3 1794 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 CCP110O43303 1012 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 ZNF202O95125 648 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 AARSP49588 968 aaKnown RBP eCLIP9.06□□□□□ -0.96
SCG3-201ENST00000220478 CHMP4BP1P59074 171 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 EFCAB13Q8IY85 973 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 XAGE2Q96GT9 111 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 FMNL2Q96PY5 1086 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 EYA1Q99502 592 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 ZSWIM4Q9H7M6 989 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 MKRN1Q9UHC7 482 aaKnown RBP9.06□□□□□ -0.96
SCG3-201ENST00000220478 PARP4Q9UKK3 1724 aaKnown RBP9.06□□□□□ -0.96
SCG3-201ENST00000220478 HPSEQ9Y251 543 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 USP6P35125 1406 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 ZNF18P17022 549 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 ME1P48163 572 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 UBASH3AP57075 661 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 LEKR1Q6ZMV7 388 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 CCDC129Q6ZRS4 1044 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 APTXQ7Z2E3 356 aaKnown RBP9.06□□□□□ -0.96
SCG3-201ENST00000220478 HDXQ7Z353 690 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 NEK1Q96PY6 1258 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 FAM204AQ9H8W3 233 aa9.06□□□□□ -0.96
SCG3-201ENST00000220478 GRIN2DO15399 1336 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms