RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 WDR19Q8NEZ3 1342 aa19.99■□□□□ 0.79
USB1-201ENST00000219281 RXRAP19793 462 aa19.99■□□□□ 0.79
USB1-201ENST00000219281 MCAMP43121 646 aa19.99■□□□□ 0.79
USB1-201ENST00000219281 TRDNQ13061 729 aa19.99■□□□□ 0.79
USB1-201ENST00000219281 CCDC150Q8NCX0 1101 aa19.99■□□□□ 0.79
USB1-201ENST00000219281 ALG1Q9BT22 464 aa19.99■□□□□ 0.79
USB1-201ENST00000219281 SPATA31A1Q5TZJ5 1347 aa19.99■□□□□ 0.79
USB1-201ENST00000219281 METTL24Q5JXM2 366 aa19.99■□□□□ 0.79
USB1-201ENST00000219281 CYB5R4Q7L1T6 521 aa19.99■□□□□ 0.79
USB1-201ENST00000219281 ZBTB38Q8NAP3 1195 aaPredicted RBP19.99■□□□□ 0.79
USB1-201ENST00000219281 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.99■□□□□ 0.79
USB1-201ENST00000219281 ZMYM6O95789 1325 aa19.98■□□□□ 0.79
USB1-201ENST00000219281 CSF1RP07333 972 aa19.98■□□□□ 0.79
USB1-201ENST00000219281 SFPQP23246 707 aaKnown RBP eCLIP19.98■□□□□ 0.79
USB1-201ENST00000219281 LMOD1P29536 600 aaPredicted RBP19.98■□□□□ 0.79
USB1-201ENST00000219281 METAP2P50579 478 aaKnown RBP eCLIP19.98■□□□□ 0.79
USB1-201ENST00000219281 TBC1D10CQ8IV04 446 aa19.98■□□□□ 0.79
USB1-201ENST00000219281 PLA2G12BQ9BX93 195 aa19.98■□□□□ 0.79
USB1-201ENST00000219281 DDX41Q9UJV9 622 aaKnown RBP19.98■□□□□ 0.79
USB1-201ENST00000219281 ANGEL1Q9UNK9 670 aaKnown RBP19.98■□□□□ 0.79
USB1-201ENST00000219281 KIF2AO00139 706 aaPredicted RBP19.97■□□□□ 0.79
USB1-201ENST00000219281 APPP05067 770 aa19.97■□□□□ 0.79
USB1-201ENST00000219281 GPTP24298 496 aa19.97■□□□□ 0.79
USB1-201ENST00000219281 SYKP43405 635 aa19.97■□□□□ 0.79
USB1-201ENST00000219281 SLC9C2Q5TAH2 1124 aa19.97■□□□□ 0.79
USB1-201ENST00000219281 ERO1AQ96HE7 468 aa19.97■□□□□ 0.79
USB1-201ENST00000219281 PPP1R13BQ96KQ4 1090 aa19.97■□□□□ 0.79
USB1-201ENST00000219281 ADD2P35612 726 aa19.97■□□□□ 0.79
USB1-201ENST00000219281 FANCCQ00597 558 aa19.97■□□□□ 0.79
USB1-201ENST00000219281 KRT40Q6A162 431 aa19.97■□□□□ 0.79
USB1-201ENST00000219281 NLRP10Q86W26 655 aa19.97■□□□□ 0.79
USB1-201ENST00000219281 VPS37DQ86XT2 251 aa19.97■□□□□ 0.79
USB1-201ENST00000219281 ABCC12Q96J65 1359 aa19.97■□□□□ 0.79
USB1-201ENST00000219281 LRP6O75581 1613 aa19.96■□□□□ 0.79
USB1-201ENST00000219281 GNL2Q13823 731 aaKnown RBP19.96■□□□□ 0.79
USB1-201ENST00000219281 ZNF397Q8NF99 534 aaPredicted RBP19.96■□□□□ 0.79
USB1-201ENST00000219281 PHKBQ93100 1093 aa19.96■□□□□ 0.79
USB1-201ENST00000219281 SENP2Q9HC62 589 aa19.96■□□□□ 0.79
USB1-201ENST00000219281 RIPOR2Q9Y4F9 1068 aa19.96■□□□□ 0.79
USB1-201ENST00000219281 PLCH1Q4KWH8 1693 aa19.96■□□□□ 0.79
USB1-201ENST00000219281 SH2B2O14492 632 aaPredicted RBP19.96■□□□□ 0.79
USB1-201ENST00000219281 SLU7O95391 586 aaKnown RBP19.96■□□□□ 0.79
USB1-201ENST00000219281 ATP1A3P13637 1013 aa19.96■□□□□ 0.79
USB1-201ENST00000219281 CDC27P30260 824 aa19.96■□□□□ 0.79
USB1-201ENST00000219281 ELF2Q15723 593 aa19.96■□□□□ 0.79
USB1-201ENST00000219281 KMT5BQ4FZB7 885 aa19.96■□□□□ 0.79
USB1-201ENST00000219281 LDHAL6AQ6ZMR3 332 aa19.96■□□□□ 0.79
USB1-201ENST00000219281 TIGD1Q96MW7 591 aa19.96■□□□□ 0.79
USB1-201ENST00000219281 RIC1Q4ADV7 1423 aa19.95■□□□□ 0.78
USB1-201ENST00000219281 IGSF3O75054 1194 aa19.95■□□□□ 0.78
USB1-201ENST00000219281 SHC4Q6S5L8 630 aa19.95■□□□□ 0.78
USB1-201ENST00000219281 IKBKBO14920 756 aa19.95■□□□□ 0.78
USB1-201ENST00000219281 DDB1Q16531 1140 aa19.95■□□□□ 0.78
USB1-201ENST00000219281 HSD3B7Q9H2F3 369 aa19.95■□□□□ 0.78
USB1-201ENST00000219281 PIH1D3Q9NQM4 214 aaKnown RBP19.95■□□□□ 0.78
USB1-201ENST00000219281 TBC1D2BQ9UPU7 963 aa19.95■□□□□ 0.78
USB1-201ENST00000219281 HPSEQ9Y251 543 aa19.95■□□□□ 0.78
USB1-201ENST00000219281 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.94■□□□□ 0.78
USB1-201ENST00000219281 PSDA5PKW4 1024 aaPredicted RBP19.94■□□□□ 0.78
USB1-201ENST00000219281 B4E1Z4 1266 aa19.94■□□□□ 0.78
USB1-201ENST00000219281 IDH1O75874 414 aaKnown RBP19.94■□□□□ 0.78
USB1-201ENST00000219281 CDKL5O76039 1030 aa19.94■□□□□ 0.78
USB1-201ENST00000219281 ITGA6P23229 1130 aa19.94■□□□□ 0.78
USB1-201ENST00000219281 PTPAQ15257 358 aa19.94■□□□□ 0.78
USB1-201ENST00000219281 SYT10Q6XYQ8 523 aa19.94■□□□□ 0.78
USB1-201ENST00000219281 MICU3Q86XE3 530 aa19.94■□□□□ 0.78
USB1-201ENST00000219281 MARCH10Q8NA82 808 aaPredicted RBP19.94■□□□□ 0.78
USB1-201ENST00000219281 CDCA7Q9BWT1 371 aaPredicted RBP19.94■□□□□ 0.78
USB1-201ENST00000219281 GREM2Q9H772 168 aa19.94■□□□□ 0.78
USB1-201ENST00000219281 TUBE1Q9UJT0 475 aa19.94■□□□□ 0.78
USB1-201ENST00000219281 THRAP3Q9Y2W1 955 aaKnown RBP19.94■□□□□ 0.78
USB1-201ENST00000219281 C4AP0C0L4 1744 aa19.94■□□□□ 0.78
USB1-201ENST00000219281 C4BP0C0L5 1744 aa19.94■□□□□ 0.78
USB1-201ENST00000219281 NUTM2BA6NNL0 878 aaPredicted RBP19.93■□□□□ 0.78
USB1-201ENST00000219281 NUTM2EB1AL46 878 aaPredicted RBP19.93■□□□□ 0.78
USB1-201ENST00000219281 PPP6R2O75170 966 aa19.93■□□□□ 0.78
USB1-201ENST00000219281 PNOCQ13519 176 aa19.93■□□□□ 0.78
USB1-201ENST00000219281 APOA5Q6Q788 366 aa19.93■□□□□ 0.78
USB1-201ENST00000219281 NUTM2AQ8IVF1 878 aaPredicted RBP19.93■□□□□ 0.78
USB1-201ENST00000219281 CLIC6Q96NY7 704 aa19.93■□□□□ 0.78
USB1-201ENST00000219281 CNNM1Q9NRU3 951 aa19.93■□□□□ 0.78
USB1-201ENST00000219281 MORC2Q9Y6X9 1032 aaPredicted RBP19.93■□□□□ 0.78
USB1-201ENST00000219281 NRDCO43847 1150 aa19.93■□□□□ 0.78
USB1-201ENST00000219281 JMYQ8N9B5 988 aa19.93■□□□□ 0.78
USB1-201ENST00000219281 ACSBG1Q96GR2 724 aa19.93■□□□□ 0.78
USB1-201ENST00000219281 MAP3K14Q99558 947 aa19.93■□□□□ 0.78
USB1-201ENST00000219281 DDX60Q8IY21 1712 aaKnown RBP19.92■□□□□ 0.78
USB1-201ENST00000219281 NPHP1O15259 732 aa19.92■□□□□ 0.78
USB1-201ENST00000219281 IL6STP40189 918 aaPredicted RBP19.92■□□□□ 0.78
USB1-201ENST00000219281 FBXO38Q6PIJ6 1188 aa19.92■□□□□ 0.78
USB1-201ENST00000219281 CPLX2Q6PUV4 134 aaKnown RBP19.92■□□□□ 0.78
USB1-201ENST00000219281 NFXL1Q6ZNB6 911 aa19.92■□□□□ 0.78
USB1-201ENST00000219281 RGS22Q8NE09 1264 aa19.92■□□□□ 0.78
USB1-201ENST00000219281 TTLL11Q8NHH1 800 aa19.92■□□□□ 0.78
USB1-201ENST00000219281 DPF2Q92785 391 aa19.92■□□□□ 0.78
USB1-201ENST00000219281 ZNF532Q9HCE3 1301 aa19.92■□□□□ 0.78
USB1-201ENST00000219281 DHX8Q14562 1220 aaKnown RBP19.92■□□□□ 0.78
USB1-201ENST00000219281 TTF1Q15361 905 aaPredicted RBP19.92■□□□□ 0.78
USB1-201ENST00000219281 MYL10Q9BUA6 226 aa19.92■□□□□ 0.78
USB1-201ENST00000219281 INCENPQ9NQS7 918 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms