RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 USPL1Q5W0Q7 1092 aa19.24■□□□□ 0.67
CTDP1-201ENST00000075430 LLPHQ9BRT6 129 aaKnown RBP19.24■□□□□ 0.67
CTDP1-201ENST00000075430 AKAP12Q02952 1782 aa19.24■□□□□ 0.67
CTDP1-201ENST00000075430 RNF113AO15541 343 aaKnown RBP19.24■□□□□ 0.67
CTDP1-201ENST00000075430 SCARF1Q14162 830 aa19.24■□□□□ 0.67
CTDP1-201ENST00000075430 SOWAHDA6NJG2 315 aa19.23■□□□□ 0.67
CTDP1-201ENST00000075430 CYP2C19P33261 490 aa19.23■□□□□ 0.67
CTDP1-201ENST00000075430 ZAP70P43403 619 aa19.23■□□□□ 0.67
CTDP1-201ENST00000075430 METAP2P50579 478 aaKnown RBP eCLIP19.23■□□□□ 0.67
CTDP1-201ENST00000075430 ZSCAN26Q16670 478 aa19.23■□□□□ 0.67
CTDP1-201ENST00000075430 HELBQ8NG08 1087 aaPredicted RBP19.23■□□□□ 0.67
CTDP1-201ENST00000075430 POLR2DO15514 142 aaKnown RBP19.23■□□□□ 0.67
CTDP1-201ENST00000075430 KRT40Q6A162 431 aa19.23■□□□□ 0.67
CTDP1-201ENST00000075430 NKX2-3Q8TAU0 364 aa19.23■□□□□ 0.67
CTDP1-201ENST00000075430 ANKARQ7Z5J8 1434 aa19.23■□□□□ 0.67
CTDP1-201ENST00000075430 PDE11AQ9HCR9 933 aa19.22■□□□□ 0.67
CTDP1-201ENST00000075430 IMPACTQ9P2X3 320 aa19.22■□□□□ 0.67
CTDP1-201ENST00000075430 MAPK8IP1Q9UQF2 711 aa19.22■□□□□ 0.67
CTDP1-201ENST00000075430 CYP27B1O15528 508 aa19.22■□□□□ 0.67
CTDP1-201ENST00000075430 N4BP1O75113 896 aaKnown RBP19.22■□□□□ 0.67
CTDP1-201ENST00000075430 CCDC102BQ68D86 513 aa19.22■□□□□ 0.67
CTDP1-201ENST00000075430 COPRSQ9NQ92 184 aa19.22■□□□□ 0.67
CTDP1-201ENST00000075430 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.22■□□□□ 0.67
CTDP1-201ENST00000075430 RSPH14Q9UHP6 348 aa19.22■□□□□ 0.67
CTDP1-201ENST00000075430 ZSCAN12O43309 604 aa19.22■□□□□ 0.67
CTDP1-201ENST00000075430 EXOSC10Q01780 885 aaKnown RBP19.22■□□□□ 0.67
CTDP1-201ENST00000075430 ZNF569Q5MCW4 686 aa19.22■□□□□ 0.67
CTDP1-201ENST00000075430 SYNE4Q8N205 404 aa19.22■□□□□ 0.67
CTDP1-201ENST00000075430 DHX16O60231 1041 aaKnown RBP19.21■□□□□ 0.67
CTDP1-201ENST00000075430 LRRFIP1Q32MZ4 808 aaKnown RBP19.21■□□□□ 0.67
CTDP1-201ENST00000075430 L2HGDHQ9H9P8 463 aa19.21■□□□□ 0.67
CTDP1-201ENST00000075430 PARP3Q9Y6F1 533 aa19.21■□□□□ 0.67
CTDP1-201ENST00000075430 PSDA5PKW4 1024 aaPredicted RBP19.21■□□□□ 0.67
CTDP1-201ENST00000075430 SNAP23O00161 211 aa19.21■□□□□ 0.67
CTDP1-201ENST00000075430 TADA3O75528 432 aa19.21■□□□□ 0.67
CTDP1-201ENST00000075430 CCT6AP40227 531 aaKnown RBP19.21■□□□□ 0.67
CTDP1-201ENST00000075430 CCDC158Q5M9N0 1113 aa19.21■□□□□ 0.67
CTDP1-201ENST00000075430 TRIM65Q6PJ69 517 aa19.21■□□□□ 0.67
CTDP1-201ENST00000075430 SHC4Q6S5L8 630 aa19.21■□□□□ 0.67
CTDP1-201ENST00000075430 KIF23Q02241 960 aaPredicted RBP19.21■□□□□ 0.67
CTDP1-201ENST00000075430 FOXP4Q8IVH2 680 aaPredicted RBP19.21■□□□□ 0.67
CTDP1-201ENST00000075430 KCNH3Q9ULD8 1083 aa19.21■□□□□ 0.67
CTDP1-201ENST00000075430 VWA3AA6NCI4 1184 aa19.2■□□□□ 0.66
CTDP1-201ENST00000075430 PRR29P0C7W0 189 aa19.2■□□□□ 0.66
CTDP1-201ENST00000075430 TSGA10IPQ3SY00 556 aa19.2■□□□□ 0.66
CTDP1-201ENST00000075430 FAM89AQ96GI7 184 aa19.2■□□□□ 0.66
CTDP1-201ENST00000075430 BTBD18B2RXH4 712 aa19.2■□□□□ 0.66
CTDP1-201ENST00000075430 ZMYND10O75800 440 aa19.2■□□□□ 0.66
CTDP1-201ENST00000075430 USP49Q70CQ1 688 aa19.2■□□□□ 0.66
CTDP1-201ENST00000075430 REXO1L1PQ8IX06 675 aa19.2■□□□□ 0.66
CTDP1-201ENST00000075430 CBFA2T2O43439 604 aa19.2■□□□□ 0.66
CTDP1-201ENST00000075430 AKAP17AQ02040 695 aaKnown RBP19.2■□□□□ 0.66
CTDP1-201ENST00000075430 CC2D1AQ6P1N0 951 aaPredicted RBP19.2■□□□□ 0.66
CTDP1-201ENST00000075430 NCOA7Q8NI08 942 aa19.2■□□□□ 0.66
CTDP1-201ENST00000075430 SERTAD1Q9UHV2 236 aa19.2■□□□□ 0.66
CTDP1-201ENST00000075430 MTMR7Q9Y216 660 aa19.2■□□□□ 0.66
CTDP1-201ENST00000075430 TEX33O43247 280 aa19.19■□□□□ 0.66
CTDP1-201ENST00000075430 TBC1D8O95759 1140 aa19.19■□□□□ 0.66
CTDP1-201ENST00000075430 CCDC57Q2TAC2 916 aa19.19■□□□□ 0.66
CTDP1-201ENST00000075430 ZMYM1Q5SVZ6 1142 aa19.19■□□□□ 0.66
CTDP1-201ENST00000075430 AXDND1Q5T1B0 1012 aaPredicted RBP19.19■□□□□ 0.66
CTDP1-201ENST00000075430 PIK3C2AO00443 1686 aa19.19■□□□□ 0.66
CTDP1-201ENST00000075430 RFX5P48382 616 aaPredicted RBP19.18■□□□□ 0.66
CTDP1-201ENST00000075430 FMR1Q06787 632 aaKnown RBP eCLIP19.18■□□□□ 0.66
CTDP1-201ENST00000075430 GPAA1O43292 621 aa19.18■□□□□ 0.66
CTDP1-201ENST00000075430 IARSP41252 1262 aaKnown RBP19.18■□□□□ 0.66
CTDP1-201ENST00000075430 SLC9C2Q5TAH2 1124 aa19.18■□□□□ 0.66
CTDP1-201ENST00000075430 CPLX2Q6PUV4 134 aaKnown RBP19.18■□□□□ 0.66
CTDP1-201ENST00000075430 MRPL44Q9H9J2 332 aaKnown RBP19.18■□□□□ 0.66
CTDP1-201ENST00000075430 RAI14Q9P0K7 980 aa19.18■□□□□ 0.66
CTDP1-201ENST00000075430 IQSEC3Q9UPP2 1182 aaPredicted RBP19.18■□□□□ 0.66
CTDP1-201ENST00000075430 GOLGA8AA7E2F4 631 aa19.18■□□□□ 0.66
CTDP1-201ENST00000075430 MRPS25P82663 173 aaKnown RBP19.18■□□□□ 0.66
CTDP1-201ENST00000075430 JAKMIP3Q5VZ66 844 aa19.18■□□□□ 0.66
CTDP1-201ENST00000075430 ZNF274Q96GC6 653 aaPredicted RBP19.18■□□□□ 0.66
CTDP1-201ENST00000075430 CDC5LQ99459 802 aaKnown RBP19.18■□□□□ 0.66
CTDP1-201ENST00000075430 LONRF2Q1L5Z9 754 aa19.17■□□□□ 0.66
CTDP1-201ENST00000075430 CCDC93Q567U6 631 aa19.17■□□□□ 0.66
CTDP1-201ENST00000075430 FOXR1Q6PIV2 292 aa19.17■□□□□ 0.66
CTDP1-201ENST00000075430 METTL16Q86W50 562 aaKnown RBP19.17■□□□□ 0.66
CTDP1-201ENST00000075430 ADAM21Q9UKJ8 722 aa19.17■□□□□ 0.66
CTDP1-201ENST00000075430 CMA1P23946 247 aa19.17■□□□□ 0.66
CTDP1-201ENST00000075430 CDC25AP30304 524 aa19.17■□□□□ 0.66
CTDP1-201ENST00000075430 CTDSPL2Q05D32 466 aa19.17■□□□□ 0.66
CTDP1-201ENST00000075430 NR5A1Q13285 461 aa19.17■□□□□ 0.66
CTDP1-201ENST00000075430 PPFIBP1Q86W92 1011 aa19.17■□□□□ 0.66
CTDP1-201ENST00000075430 DCAF5Q96JK2 942 aa19.17■□□□□ 0.66
CTDP1-201ENST00000075430 H3BQF6 201 aa19.17■□□□□ 0.66
CTDP1-201ENST00000075430 SLC4A8Q2Y0W8 1093 aa19.17■□□□□ 0.66
CTDP1-201ENST00000075430 TFR2Q9UP52 801 aa19.17■□□□□ 0.66
CTDP1-201ENST00000075430 XRN1Q8IZH2 1706 aaKnown RBP19.16■□□□□ 0.66
CTDP1-201ENST00000075430 ABL1P00519 1130 aa19.16■□□□□ 0.66
CTDP1-201ENST00000075430 RGS22Q8NE09 1264 aa19.16■□□□□ 0.66
CTDP1-201ENST00000075430 CAPZA3Q96KX2 299 aa19.16■□□□□ 0.66
CTDP1-201ENST00000075430 EFCAB8A8MWE9 144 aa19.16■□□□□ 0.66
CTDP1-201ENST00000075430 VSTM4Q8IW00 320 aa19.16■□□□□ 0.66
CTDP1-201ENST00000075430 ACRBPQ8NEB7 543 aa19.16■□□□□ 0.66
CTDP1-201ENST00000075430 XAGE2Q96GT9 111 aa19.16■□□□□ 0.66
CTDP1-201ENST00000075430 BAZ2BQ9UIF8 2168 aaKnown RBP19.16■□□□□ 0.66
CTDP1-201ENST00000075430 A0A1W2PQ27 194 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms