RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Fgd5Q80UZ0 1219 aa18.33■□□□□ 0.53
Col17a1-202ENSMUST00000086923 Abhd8Q8R0P8 439 aa18.33■□□□□ 0.53
Col17a1-202ENSMUST00000086923 Dzip1lQ499E4 774 aa18.33■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Spag7Q7TNE3 227 aaKnown RBP18.33■□□□□ 0.52
Col17a1-202ENSMUST00000086923 D130040H23RikQ8BII3 405 aa18.33■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Fam228aQ8CDW1 299 aa18.33■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Gm5862K7N5V5 267 aa18.33■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Fchsd1Q6PFY1 688 aa18.33■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Jph4Q80WT0 628 aa18.33■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Serpinb13Q8CDC0 389 aa18.33■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Q8R1Y2 203 aa18.33■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Zcchc8Q9CYA6 709 aaKnown RBP18.33■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Brpf3B2KF05 1204 aaKnown RBP18.33■□□□□ 0.52
Col17a1-202ENSMUST00000086923 DgkiD3YWQ0 1071 aa18.33■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Cct6aP80317 531 aaKnown RBP18.33■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Tcerg1lQ3B807 590 aa18.33■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Ccdc113Q8C5T8 377 aa18.33■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Creld2Q9CYA0 350 aa18.33■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Cacna2d4Q5RJF7 1116 aa18.32■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Fbxo41Q6NS60 873 aa18.32■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Ccdc7Q9D541 371 aa18.32■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Kcnh3Q9WVJ0 1095 aa18.32■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Ccdc24E9PUW8 296 aa18.32■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Ppp1r1bQ60829 194 aa18.32■□□□□ 0.52
Col17a1-202ENSMUST00000086923 GopcQ8BH60 463 aa18.32■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Gsta4P24472 222 aa18.32■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Gm5935Q497S0 212 aa18.32■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Tsr1Q5SWD9 803 aa18.32■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Ckap2lQ7TS74 745 aa18.32■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Riok1Q922Q2 567 aa18.32■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Ccdc182Q9D9C6 152 aa18.32■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Angptl3Q9R182 455 aa18.32■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Ctnnd1P30999 938 aaKnown RBP18.32■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Ppp1r12bQ8BG95 976 aa18.32■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Irak4Q8R4K2 459 aa18.32■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Polr3aB2RXC6 1390 aa18.31■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Gas2l2Q5SSG4 860 aa18.31■□□□□ 0.52
Col17a1-202ENSMUST00000086923 BrapQ99MP8 591 aa18.31■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Q9D9H8 365 aa18.31■□□□□ 0.52
Col17a1-202ENSMUST00000086923 PsdQ5DTT2 1024 aa18.31■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Trim68Q8K243 485 aa18.31■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Acsbg1Q99PU5 721 aa18.31■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Pdzrn4E9PUZ9 1014 aa18.31■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Cnot10Q8BH15 744 aa18.31■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Rab11fip4Q8BQP8 635 aa18.31■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Ccdc130Q9D516 385 aa18.31■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Traf3ip1Q149C2 625 aa18.31■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Acnat2Q8BGG9 420 aa18.31■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Ttc13A0A1L1SSC7 844 aa18.3■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Eef1bO70251 225 aaKnown RBP18.3■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Ap1g2O88512 791 aa18.3■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Q66JV7 365 aa18.3■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Clec4gQ8BNX1 294 aa18.3■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Tcp11l1Q8BTG3 509 aa18.3■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Panx2Q6IMP4 677 aa18.3■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Rnf41Q8BH75 317 aa18.3■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Hirip3Q8BLH7 601 aa18.3■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Myo1eE9Q634 1107 aa18.3■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Myo1fP70248 1099 aa18.3■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Gm6588E9Q3K0 461 aa18.3■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Tbc1d1Q60949 1255 aa18.3■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Zrsr1Q64707 428 aa18.3■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Tmem266Q8BZB3 538 aa18.3■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Cbx8Q9QXV1 362 aa18.3■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Tbc1d4Q8BYJ6 1307 aa18.3■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Rprd2Q6NXI6 1469 aaKnown RBP18.3■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Haus2Q9CQS9 234 aa18.29■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Gm5934D3Z4U6 212 aa18.29■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Atp8b2P98199 1209 aa18.29■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Gm28047Q3US59 414 aa18.29■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Mei4Q8BRM6 389 aa18.29■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Zscan18E9PUD6 809 aa18.29■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Stk10O55098 966 aa18.29■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Ppp1r15aP17564 657 aa18.29■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Ccdc13D3YV10 709 aa18.29■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Tuft1O08970 390 aa18.29■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Slc12a5Q91V14 1138 aa18.29■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Rrp15Q9CYX7 281 aaKnown RBP18.29■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Arhgap42B2RQE8 841 aa18.29■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Mcmdc2E9Q956 681 aa18.29■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Btbd11Q6GQW0 1109 aa18.29■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Cdk19Q8BWD8 501 aa18.29■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Ccdc92Q8VDN4 314 aa18.29■□□□□ 0.52
Col17a1-202ENSMUST00000086923 PaskQ8CEE6 1383 aa18.28■□□□□ 0.52
Col17a1-202ENSMUST00000086923 FanccP50652 591 aa18.28■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Caprin2Q05A80 1031 aaKnown RBP18.28■□□□□ 0.52
Col17a1-202ENSMUST00000086923 CtcfQ61164 736 aaKnown RBP18.28■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Pde5aQ8CG03 865 aa18.28■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Ulbp1Q8HWA3 334 aa18.28■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Parp2O88554 559 aa18.28■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Krt14Q61781 484 aa18.28■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Fkbp5Q64378 456 aa18.28■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Kdm1aQ6ZQ88 853 aa18.28■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Ubac1Q8VDI7 409 aa18.28■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Krt79Q8VED5 531 aa18.28■□□□□ 0.52
Col17a1-202ENSMUST00000086923 MefvQ9JJ26 767 aa18.28■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Rbbp8nlA2ABX0 614 aa18.28■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Tdo2P48776 406 aa18.28■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Ero1aQ8R180 464 aa18.28■□□□□ 0.52
Col17a1-202ENSMUST00000086923 Tacc2Q9JJG0 1149 aa18.28■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms