RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 Nap1l4Q78ZA7 375 aaKnown RBP17.27■□□□□ 0.36
Usp38-201ENSMUST00000042724 Stac3Q8BZ71 360 aa17.27■□□□□ 0.36
Usp38-201ENSMUST00000042724 PtprmP28828 1452 aa17.27■□□□□ 0.35
Usp38-201ENSMUST00000042724 Ccdc85cE9Q6B2 420 aa17.27■□□□□ 0.35
Usp38-201ENSMUST00000042724 Plcb3P51432 1234 aaKnown RBP17.27■□□□□ 0.35
Usp38-201ENSMUST00000042724 Mdh1bQ5F204 500 aa17.27■□□□□ 0.35
Usp38-201ENSMUST00000042724 Paxbp1P58501 919 aa17.26■□□□□ 0.35
Usp38-201ENSMUST00000042724 Col4a3bpQ9EQG9 624 aa17.26■□□□□ 0.35
Usp38-201ENSMUST00000042724 AmfrQ9R049 643 aa17.26■□□□□ 0.35
Usp38-201ENSMUST00000042724 Ankrd40Q5SUE8 363 aa17.26■□□□□ 0.35
Usp38-201ENSMUST00000042724 Exoc8Q6PGF7 716 aa17.26■□□□□ 0.35
Usp38-201ENSMUST00000042724 Calml3Q9D6P8 149 aa17.26■□□□□ 0.35
Usp38-201ENSMUST00000042724 Vwa3bJ9JI28 736 aa17.26■□□□□ 0.35
Usp38-201ENSMUST00000042724 Gng11P61953 73 aa17.26■□□□□ 0.35
Usp38-201ENSMUST00000042724 Gse1Q3U3C9 1213 aa17.26■□□□□ 0.35
Usp38-201ENSMUST00000042724 Matr3Q8K310 846 aaKnown RBP17.26■□□□□ 0.35
Usp38-201ENSMUST00000042724 Cetn1P41209 172 aa17.26■□□□□ 0.35
Usp38-201ENSMUST00000042724 Spata18Q0P557 537 aa17.26■□□□□ 0.35
Usp38-201ENSMUST00000042724 Pex1Q5BL07 1284 aa17.26■□□□□ 0.35
Usp38-201ENSMUST00000042724 Znf428Q8C1M2 176 aa17.26■□□□□ 0.35
Usp38-201ENSMUST00000042724 Atad2Q8CDM1 1040 aa17.26■□□□□ 0.35
Usp38-201ENSMUST00000042724 Usp37Q8C0R0 979 aa17.25■□□□□ 0.35
Usp38-201ENSMUST00000042724 Cetn2Q9R1K9 172 aa17.25■□□□□ 0.35
Usp38-201ENSMUST00000042724 Abca9Q8K449 1623 aa17.25■□□□□ 0.35
Usp38-201ENSMUST00000042724 Slc4a8Q8JZR6 1089 aa17.25■□□□□ 0.35
Usp38-201ENSMUST00000042724 Ubac1Q8VDI7 409 aa17.25■□□□□ 0.35
Usp38-201ENSMUST00000042724 SnrkQ8VDU5 748 aa17.25■□□□□ 0.35
Usp38-201ENSMUST00000042724 Lonrf3Q9D4H7 753 aa17.25■□□□□ 0.35
Usp38-201ENSMUST00000042724 Cabp5Q9JLK3 173 aa17.25■□□□□ 0.35
Usp38-201ENSMUST00000042724 Chaf1aQ9QWF0 911 aa17.25■□□□□ 0.35
Usp38-201ENSMUST00000042724 Ugt1a5B2RT14 529 aa17.25■□□□□ 0.35
Usp38-201ENSMUST00000042724 AbraQ8BUZ1 375 aa17.25■□□□□ 0.35
Usp38-201ENSMUST00000042724 Tbc1d8Q9Z1A9 1134 aa17.25■□□□□ 0.35
Usp38-201ENSMUST00000042724 Tbc1d2B1AVH7 922 aa17.24■□□□□ 0.35
Usp38-201ENSMUST00000042724 Hmgb1P63158 215 aaKnown RBP17.24■□□□□ 0.35
Usp38-201ENSMUST00000042724 Sass6Q80UK7 654 aa17.24■□□□□ 0.35
Usp38-201ENSMUST00000042724 Cyp2d12Q8BVD2 504 aa17.24■□□□□ 0.35
Usp38-201ENSMUST00000042724 Lzts2Q91YU6 671 aa17.24■□□□□ 0.35
Usp38-201ENSMUST00000042724 Fbxo3Q9DC63 480 aa17.24■□□□□ 0.35
Usp38-201ENSMUST00000042724 Kcnh3Q9WVJ0 1095 aa17.24■□□□□ 0.35
Usp38-201ENSMUST00000042724 Rrp1P56183 494 aaKnown RBP17.24■□□□□ 0.35
Usp38-201ENSMUST00000042724 Plagl1Q9JLQ4 704 aa17.24■□□□□ 0.35
Usp38-201ENSMUST00000042724 Topbp1Q6ZQF0 1515 aa17.24■□□□□ 0.35
Usp38-201ENSMUST00000042724 Zfp853A0A1D5RM95 733 aa17.24■□□□□ 0.35
Usp38-201ENSMUST00000042724 Fam186bD3Z420 943 aa17.24■□□□□ 0.35
Usp38-201ENSMUST00000042724 Tspyl3Q3UYP3 334 aa17.24■□□□□ 0.35
Usp38-201ENSMUST00000042724 Pim2Q62070 370 aa17.24■□□□□ 0.35
Usp38-201ENSMUST00000042724 Stn1Q8K2X3 378 aa17.24■□□□□ 0.35
Usp38-201ENSMUST00000042724 Spocd1B1ASB6 936 aa17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 PparaP23204 468 aa17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 Jakmip3Q5DTN8 844 aa17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 Hook2Q7TMK6 716 aa17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 Ripor2Q80U16 1078 aa17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 Bst2Q8R2Q8 172 aa17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 Ccdc94Q9D6J3 314 aa17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 Fbf1A2A870 1173 aa17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 Eif6O55135 245 aa17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 Clca2Q8BG22 942 aa17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 Me3Q8BMF3 604 aa17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 Hook3Q8BUK6 718 aa17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 Kiaa1024Q8K3V7 917 aa17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 Syce1Q9D495 329 aa17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 2310002L09RikQ9D7L5 217 aa17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 Atp12aQ9Z1W8 1035 aa17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 Parp1P11103 1013 aaKnown RBP17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 Haus6Q6NV99 933 aaKnown RBP17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 Ccdc12Q8R344 166 aaKnown RBP17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 AdpgkQ8VDL4 496 aa17.23■□□□□ 0.35
Usp38-201ENSMUST00000042724 Dok7Q18PE0 504 aa17.22■□□□□ 0.35
Usp38-201ENSMUST00000042724 TxlnaQ6PAM1 554 aaKnown RBP17.22■□□□□ 0.35
Usp38-201ENSMUST00000042724 Cyp4f39Q8BGU0 532 aa17.22■□□□□ 0.35
Usp38-201ENSMUST00000042724 Nop2Q922K7 793 aaKnown RBP17.22■□□□□ 0.35
Usp38-201ENSMUST00000042724 Gtf2iQ9ESZ8 998 aaKnown RBP17.22■□□□□ 0.35
Usp38-201ENSMUST00000042724 Arid3aQ62431 601 aa17.22■□□□□ 0.35
Usp38-201ENSMUST00000042724 Yeats4Q9CR11 227 aaKnown RBP17.22■□□□□ 0.35
Usp38-201ENSMUST00000042724 Dip2bQ3UH60 1574 aa17.22■□□□□ 0.35
Usp38-201ENSMUST00000042724 Ano6Q6P9J9 911 aa17.22■□□□□ 0.35
Usp38-201ENSMUST00000042724 Vps18Q8R307 973 aa17.22■□□□□ 0.35
Usp38-201ENSMUST00000042724 Tut1Q8R3F9 869 aa17.22■□□□□ 0.35
Usp38-201ENSMUST00000042724 Ccdc105Q9D4K7 499 aa17.22■□□□□ 0.35
Usp38-201ENSMUST00000042724 Oas2E9Q9A9 742 aa17.22■□□□□ 0.35
Usp38-201ENSMUST00000042724 Aox2Q5SGK3 1345 aa17.22■□□□□ 0.35
Usp38-201ENSMUST00000042724 Kiaa1524Q8BWY9 907 aa17.21■□□□□ 0.35
Usp38-201ENSMUST00000042724 Serpina10Q8R121 448 aa17.21■□□□□ 0.35
Usp38-201ENSMUST00000042724 Gdf11Q9Z1W4 405 aa17.21■□□□□ 0.35
Usp38-201ENSMUST00000042724 Myo5cE9Q1F5 1742 aa17.21■□□□□ 0.35
Usp38-201ENSMUST00000042724 Ccdc93Q7TQK5 629 aa17.21■□□□□ 0.35
Usp38-201ENSMUST00000042724 Pold4Q9CWP8 107 aa17.21■□□□□ 0.35
Usp38-201ENSMUST00000042724 Stag1Q9D3E6 1258 aa17.21■□□□□ 0.35
Usp38-201ENSMUST00000042724 Pde11aP0C1Q2 933 aa17.21■□□□□ 0.34
Usp38-201ENSMUST00000042724 Kif5bQ61768 963 aa17.21■□□□□ 0.34
Usp38-201ENSMUST00000042724 LarsQ8BMJ2 1178 aa17.21■□□□□ 0.34
Usp38-201ENSMUST00000042724 Dnajc5gQ8C632 165 aa17.21■□□□□ 0.34
Usp38-201ENSMUST00000042724 Stat5bP42232 786 aa17.2■□□□□ 0.34
Usp38-201ENSMUST00000042724 Vps33bP59016 617 aa17.2■□□□□ 0.34
Usp38-201ENSMUST00000042724 Pkp1P97350 728 aaKnown RBP17.2■□□□□ 0.34
Usp38-201ENSMUST00000042724 Ddx31Q6NZQ2 687 aaKnown RBP17.2■□□□□ 0.34
Usp38-201ENSMUST00000042724 PaoxQ8C0L6 504 aa17.2■□□□□ 0.34
Usp38-201ENSMUST00000042724 Efhd1Q9D4J1 240 aa17.2■□□□□ 0.34
Usp38-201ENSMUST00000042724 Cyp26a1O55127 497 aa17.2■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms