RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 H3BUX3 64 aa13.44□□□□□ -0.26
PHGDH-234ENST00000642041 NUPL2O15504 423 aaKnown RBP13.44□□□□□ -0.26
PHGDH-234ENST00000642041 NDUFB8O95169 186 aa13.44□□□□□ -0.26
PHGDH-234ENST00000642041 ARL14EPLP0DKL9 152 aa13.44□□□□□ -0.26
PHGDH-234ENST00000642041 EEF1AKMT3Q96AZ1 226 aa13.44□□□□□ -0.26
PHGDH-234ENST00000642041 HIGD1AQ9Y241 93 aa13.44□□□□□ -0.26
PHGDH-234ENST00000642041 TRAV41A0A0B4J266 112 aa13.43□□□□□ -0.26
PHGDH-234ENST00000642041 A0A0G2JLM5 398 aa13.43□□□□□ -0.26
PHGDH-234ENST00000642041 PAGE4O60829 102 aa13.43□□□□□ -0.26
PHGDH-234ENST00000642041 OR2C1O95371 312 aa13.43□□□□□ -0.26
PHGDH-234ENST00000642041 PRB2P02812 416 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-234ENST00000642041 EGR2P11161 476 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-234ENST00000642041 ADCYAP1P18509 176 aa13.43□□□□□ -0.26
PHGDH-234ENST00000642041 KRTAP10-3P60369 221 aa13.43□□□□□ -0.26
PHGDH-234ENST00000642041 SMCO4Q9NRQ5 59 aa13.43□□□□□ -0.26
PHGDH-234ENST00000642041 TMEM242Q9NWH2 141 aa13.43□□□□□ -0.26
PHGDH-234ENST00000642041 DOK5Q9P104 306 aa13.43□□□□□ -0.26
PHGDH-234ENST00000642041 NAT8Q9UHE5 227 aa13.43□□□□□ -0.26
PHGDH-234ENST00000642041 FBXL7Q9UJT9 491 aa13.43□□□□□ -0.26
PHGDH-234ENST00000642041 CLPSL1A2RUU4 121 aa13.42□□□□□ -0.26
PHGDH-234ENST00000642041 CXorf65A6NEN9 183 aa13.42□□□□□ -0.26
PHGDH-234ENST00000642041 ZNF727A8MUV8 499 aa13.42□□□□□ -0.26
PHGDH-234ENST00000642041 G3V4G9 280 aa13.42□□□□□ -0.26
PHGDH-234ENST00000642041 ATP6V0E1O15342 81 aa13.42□□□□□ -0.26
PHGDH-234ENST00000642041 OR7C2O60412 319 aa13.42□□□□□ -0.26
PHGDH-234ENST00000642041 PAX6P26367 422 aa13.42□□□□□ -0.26
PHGDH-234ENST00000642041 TMEM241Q24JQ0 296 aa13.42□□□□□ -0.26
PHGDH-234ENST00000642041 Q56UQ5 140 aa13.42□□□□□ -0.26
PHGDH-234ENST00000642041 ASPHD1Q5U4P2 390 aa13.42□□□□□ -0.26
PHGDH-234ENST00000642041 CST9LP1Q5W188 147 aa13.42□□□□□ -0.26
PHGDH-234ENST00000642041 SSX7Q7RTT5 188 aa13.42□□□□□ -0.26
PHGDH-234ENST00000642041 LINC00305Q7Z4B0 112 aa13.42□□□□□ -0.26
PHGDH-234ENST00000642041 TMEM37Q8WXS4 190 aa13.42□□□□□ -0.26
PHGDH-234ENST00000642041 OR4F4Q96R69 305 aa13.42□□□□□ -0.26
PHGDH-234ENST00000642041 FAM103A1Q9BTL3 118 aaKnown RBP13.42□□□□□ -0.26
PHGDH-234ENST00000642041 CTDSP1Q9GZU7 261 aa13.42□□□□□ -0.26
PHGDH-234ENST00000642041 OR51M1Q9H341 326 aa13.42□□□□□ -0.26
PHGDH-234ENST00000642041 TMEM14CQ9P0S9 112 aa13.42□□□□□ -0.26
PHGDH-234ENST00000642041 COL7A1Q02388 2944 aa13.42□□□□□ -0.26
PHGDH-234ENST00000642041 FAM181BA6NEQ2 426 aa13.41□□□□□ -0.26
PHGDH-234ENST00000642041 C9JQL5 133 aa13.41□□□□□ -0.26
PHGDH-234ENST00000642041 PLXNB1O43157 2135 aa13.41□□□□□ -0.26
PHGDH-234ENST00000642041 NDUFA7O95182 113 aa13.41□□□□□ -0.26
PHGDH-234ENST00000642041 S100A9P06702 114 aaKnown RBP13.41□□□□□ -0.26
PHGDH-234ENST00000642041 IER3P46695 156 aa13.41□□□□□ -0.26
PHGDH-234ENST00000642041 RELQ04864 619 aaPredicted RBP13.41□□□□□ -0.26
PHGDH-234ENST00000642041 DEFB112Q30KQ8 113 aa13.41□□□□□ -0.26
PHGDH-234ENST00000642041 GCSAMLQ5JQS6 135 aa13.41□□□□□ -0.26
PHGDH-234ENST00000642041 CYB561D1Q8N8Q1 229 aa13.41□□□□□ -0.26
PHGDH-234ENST00000642041 OR5T1Q8NG75 326 aa13.41□□□□□ -0.26
PHGDH-234ENST00000642041 MRAPQ8TCY5 172 aa13.41□□□□□ -0.26
PHGDH-234ENST00000642041 BTF3L4Q96K17 158 aa13.41□□□□□ -0.26
PHGDH-234ENST00000642041 PAXXQ9BUH6 204 aa13.41□□□□□ -0.26
PHGDH-234ENST00000642041 LY96Q9Y6Y9 160 aa13.41□□□□□ -0.26
PHGDH-234ENST00000642041 H3BQ15 152 aa13.4□□□□□ -0.26
PHGDH-234ENST00000642041 M0R036 132 aa13.4□□□□□ -0.26
PHGDH-234ENST00000642041 CRYBA1P05813 215 aa13.4□□□□□ -0.26
PHGDH-234ENST00000642041 PSG1P11464 419 aa13.4□□□□□ -0.26
PHGDH-234ENST00000642041 ORM2P19652 201 aa13.4□□□□□ -0.26
PHGDH-234ENST00000642041 CD81P60033 236 aa13.4□□□□□ -0.26
PHGDH-234ENST00000642041 ZNF90Q03938 601 aa13.4□□□□□ -0.26
PHGDH-234ENST00000642041 ATP5G2Q06055 141 aa13.4□□□□□ -0.26
PHGDH-234ENST00000642041 Q6YL49 198 aa13.4□□□□□ -0.26
PHGDH-234ENST00000642041 MIR17HGQ75NE6 70 aa13.4□□□□□ -0.26
PHGDH-234ENST00000642041 LYPD1Q8N2G4 141 aa13.4□□□□□ -0.26
PHGDH-234ENST00000642041 OR1B1Q8NGR6 318 aa13.4□□□□□ -0.26
PHGDH-234ENST00000642041 ZNF355PQ9NSJ1 428 aa13.4□□□□□ -0.26
PHGDH-234ENST00000642041 MRPL27Q9P0M9 148 aaKnown RBP13.4□□□□□ -0.26
PHGDH-234ENST00000642041 DMRT1Q9Y5R6 373 aa13.4□□□□□ -0.26
PHGDH-234ENST00000642041 NOTCH3Q9UM47 2321 aa13.39□□□□□ -0.27
PHGDH-234ENST00000642041 BMPR1BO00238 502 aa13.39□□□□□ -0.27
PHGDH-234ENST00000642041 APELAP0DMC3 54 aa13.39□□□□□ -0.27
PHGDH-234ENST00000642041 NDPQ00604 133 aa13.39□□□□□ -0.27
PHGDH-234ENST00000642041 GUCA2BQ16661 112 aa13.39□□□□□ -0.27
PHGDH-234ENST00000642041 ECSCRQ19T08 205 aa13.39□□□□□ -0.27
PHGDH-234ENST00000642041 SAMD5Q5TGI4 173 aa13.39□□□□□ -0.27
PHGDH-234ENST00000642041 ZNF600Q6ZNG1 722 aa13.39□□□□□ -0.27
PHGDH-234ENST00000642041 BPIFA4PQ86YQ2 179 aa13.39□□□□□ -0.27
PHGDH-234ENST00000642041 ARL6IP6Q8N6S5 226 aa13.39□□□□□ -0.27
PHGDH-234ENST00000642041 OR5AU1Q8NGC0 362 aa13.39□□□□□ -0.27
PHGDH-234ENST00000642041 C11orf52Q96A22 123 aa13.39□□□□□ -0.27
PHGDH-234ENST00000642041 GPR82Q96P67 336 aa13.39□□□□□ -0.27
PHGDH-234ENST00000642041 SMIM7Q9BQ49 75 aa13.39□□□□□ -0.27
PHGDH-234ENST00000642041 HSPB9Q9BQS6 159 aa13.39□□□□□ -0.27
PHGDH-234ENST00000642041 PRSS22Q9GZN4 317 aa13.39□□□□□ -0.27
PHGDH-234ENST00000642041 VPREB3Q9UKI3 123 aa13.39□□□□□ -0.27
PHGDH-234ENST00000642041 DNAH3Q8TD57 4116 aa13.38□□□□□ -0.27
PHGDH-234ENST00000642041 WI2-2373I1.2A0A1W2PRP0 233 aa13.38□□□□□ -0.27
PHGDH-234ENST00000642041 FAM74A7A6NL05 159 aa13.38□□□□□ -0.27
PHGDH-234ENST00000642041 PPP1R2P9O14990 202 aa13.38□□□□□ -0.27
PHGDH-234ENST00000642041 IGKV1-17P01599 117 aa13.38□□□□□ -0.27
PHGDH-234ENST00000642041 MT-ND4LP03901 98 aa13.38□□□□□ -0.27
PHGDH-234ENST00000642041 MEOX2P50222 304 aa13.38□□□□□ -0.27
PHGDH-234ENST00000642041 UBE2L3P68036 154 aaKnown RBP13.38□□□□□ -0.27
PHGDH-234ENST00000642041 RHOGP84095 191 aa13.38□□□□□ -0.27
PHGDH-234ENST00000642041 FAM90A2PQ658T7 463 aa13.38□□□□□ -0.27
PHGDH-234ENST00000642041 ZNF502Q8TBZ5 544 aa13.38□□□□□ -0.27
PHGDH-234ENST00000642041 HIST1H2BAQ96A08 127 aa13.38□□□□□ -0.27
PHGDH-234ENST00000642041 RNF125Q96EQ8 232 aa13.38□□□□□ -0.27
PHGDH-234ENST00000642041 NPFFR1Q9GZQ6 430 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms