RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 IL4P05112 153 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 SPP1P10451 314 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 RPL29P47914 159 aaKnown RBP7.18□□□□□ -1.26
PHGDH-228ENST00000641847 LYZP61626 148 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 PRR20EP86478 221 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 PRR20CP86479 221 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 PRR20DP86480 221 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 PRR20BP86481 221 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 PRR20AP86496 221 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 FFAR4Q5NUL3 377 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 OR11H1Q8NG94 326 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 OR51G1Q8NGK1 321 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 OR1N2Q8NGR9 330 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 OR2G3Q8NGZ4 309 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 Q8WTZ3 238 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 TMED6Q8WW62 240 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 RNF125Q96EQ8 232 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 ZNF414Q96IQ9 312 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 DUX3Q96PT4 197 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 SLC39A9Q9NUM3 307 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 DOK5Q9P104 306 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 NDUFA4O00483 81 aa7.17□□□□□ -1.26
PHGDH-228ENST00000641847 CFDP00746 253 aaPredicted RBP7.17□□□□□ -1.26
PHGDH-228ENST00000641847 SEC11BP0C7V7 166 aa7.17□□□□□ -1.26
PHGDH-228ENST00000641847 ZP3P21754 424 aa7.17□□□□□ -1.26
PHGDH-228ENST00000641847 SLURP1P55000 103 aa7.17□□□□□ -1.26
PHGDH-228ENST00000641847 FHL3Q13643 280 aa7.17□□□□□ -1.26
PHGDH-228ENST00000641847 GCSAMLQ5JQS6 135 aa7.17□□□□□ -1.26
PHGDH-228ENST00000641847 TOMM20LQ6UXN7 152 aa7.17□□□□□ -1.26
PHGDH-228ENST00000641847 OR1B1Q8NGR6 318 aa7.17□□□□□ -1.26
PHGDH-228ENST00000641847 TMEM190Q8WZ59 177 aa7.17□□□□□ -1.26
PHGDH-228ENST00000641847 RAX2Q96IS3 184 aa7.17□□□□□ -1.26
PHGDH-228ENST00000641847 PBDC1Q9BVG4 233 aa7.17□□□□□ -1.26
PHGDH-228ENST00000641847 ZFAND3Q9H8U3 227 aa7.17□□□□□ -1.26
PHGDH-228ENST00000641847 IGHV3OR16-8A0A075B7F1 116 aa7.16□□□□□ -1.26
PHGDH-228ENST00000641847 CCL24O00175 119 aa7.16□□□□□ -1.26
PHGDH-228ENST00000641847 COX7A2P2O60397 106 aa7.16□□□□□ -1.26
PHGDH-228ENST00000641847 ORM2P19652 201 aa7.16□□□□□ -1.26
PHGDH-228ENST00000641847 RAB2AP61019 212 aa7.16□□□□□ -1.26
PHGDH-228ENST00000641847 USF2Q15853 346 aaPredicted RBP7.16□□□□□ -1.26
PHGDH-228ENST00000641847 AKR1C8PQ5T2L2 129 aa7.16□□□□□ -1.26
PHGDH-228ENST00000641847 EIF5AL1Q6IS14 154 aaKnown RBP7.16□□□□□ -1.26
PHGDH-228ENST00000641847 ALKAL2Q6UX46 152 aa7.16□□□□□ -1.26
PHGDH-228ENST00000641847 UNQ9165/PRO28630Q6UXU0 137 aa7.16□□□□□ -1.26
PHGDH-228ENST00000641847 Q6ZRG5 221 aa7.16□□□□□ -1.26
PHGDH-228ENST00000641847 OR1L4Q8NGR5 311 aa7.16□□□□□ -1.26
PHGDH-228ENST00000641847 PHYHIPLQ96FC7 376 aa7.16□□□□□ -1.26
PHGDH-228ENST00000641847 C20orf24Q9BUV8 137 aa7.16□□□□□ -1.26
PHGDH-228ENST00000641847 VSIRQ9H7M9 311 aa7.16□□□□□ -1.26
PHGDH-228ENST00000641847 STARD9Q9P2P6 4700 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 ZNF320A2RRD8 509 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 ZNF207O43670 478 aaKnown RBP7.15□□□□□ -1.26
PHGDH-228ENST00000641847 HYPMO75409 117 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 MBP02144 154 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 OR5G3P0C626 314 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 M6PRP20645 277 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 SYNJ2BPP57105 145 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 PLP1P60201 277 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 SERF2P84101 59 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 ACOT6Q3I5F7 207 aaPredicted RBP7.15□□□□□ -1.26
PHGDH-228ENST00000641847 FAM106AQ4KMX7 169 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 TMEM41BQ5BJD5 291 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 FAM74A1Q5RGS3 127 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 PXDC1Q5TGL8 231 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 C10orf113Q5VZT2 155 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 GPHB5Q86YW7 130 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 PFDN5Q99471 154 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 ASCL2Q99929 193 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 PLA2G2EQ9NZK7 142 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 RABAC1Q9UI14 185 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 HIGD1AQ9Y241 93 aa7.15□□□□□ -1.26
PHGDH-228ENST00000641847 HERC2O95714 4834 aa7.15□□□□□ -1.27
PHGDH-228ENST00000641847 A8MWP6 167 aa7.14□□□□□ -1.27
PHGDH-228ENST00000641847 UMAD1C9J7I0 102 aa7.14□□□□□ -1.27
PHGDH-228ENST00000641847 MYCNOSP40205 109 aa7.14□□□□□ -1.27
PHGDH-228ENST00000641847 KLF5Q13887 457 aaPredicted RBP7.14□□□□□ -1.27
PHGDH-228ENST00000641847 LINC01559Q495D7 138 aa7.14□□□□□ -1.27
PHGDH-228ENST00000641847 C4orf48Q5BLP8 95 aa7.14□□□□□ -1.27
PHGDH-228ENST00000641847 SPATA31B1PQ5VZV4 182 aa7.14□□□□□ -1.27
PHGDH-228ENST00000641847 FAM122CQ6P4D5 195 aa7.14□□□□□ -1.27
PHGDH-228ENST00000641847 TEX261Q6UWH6 196 aa7.14□□□□□ -1.27
PHGDH-228ENST00000641847 PATE2Q6UY27 113 aa7.14□□□□□ -1.27
PHGDH-228ENST00000641847 HUWE1Q7Z6Z7 4374 aaKnown RBP7.14□□□□□ -1.27
PHGDH-228ENST00000641847 OR10G4Q8NGN3 311 aa7.14□□□□□ -1.27
PHGDH-228ENST00000641847 OR10G9Q8NGN4 311 aa7.14□□□□□ -1.27
PHGDH-228ENST00000641847 OR10G7Q8NGN6 311 aa7.14□□□□□ -1.27
PHGDH-228ENST00000641847 TMEM37Q8WXS4 190 aa7.14□□□□□ -1.27
PHGDH-228ENST00000641847 UHRF2Q96PU4 802 aa7.14□□□□□ -1.27
PHGDH-228ENST00000641847 METTL26Q96S19 204 aa7.14□□□□□ -1.27
PHGDH-228ENST00000641847 SLC25A22Q9H936 323 aa7.14□□□□□ -1.27
PHGDH-228ENST00000641847 UFC1Q9Y3C8 167 aa7.14□□□□□ -1.27
PHGDH-228ENST00000641847 ELOA3CA0A087WX78 387 aaPredicted RBP7.13□□□□□ -1.27
PHGDH-228ENST00000641847 IGHV3-49A0A0A0MS15 119 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 TMEM213A2RRL7 107 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 LGALS9O00182 355 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 EIF3GO75821 320 aaKnown RBP eCLIP7.13□□□□□ -1.27
PHGDH-228ENST00000641847 IFNA7P01567 189 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 SULT1A2P50226 295 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 RHOBP62745 196 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 TM4SF20Q53R12 229 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms