RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 STOML3Q8TAV4 291 aa9.93□□□□□ -0.82
PHGDH-220ENST00000641570 DLX4Q92988 240 aaPredicted RBP9.93□□□□□ -0.82
PHGDH-220ENST00000641570 RCC1LQ96I51 464 aaKnown RBP9.93□□□□□ -0.82
PHGDH-220ENST00000641570 ARV1Q9H2C2 271 aa9.93□□□□□ -0.82
PHGDH-220ENST00000641570 SLC25A22Q9H936 323 aa9.93□□□□□ -0.82
PHGDH-220ENST00000641570 ADARB2-AS1A8MUL3 147 aa9.92□□□□□ -0.82
PHGDH-220ENST00000641570 A8MWP6 167 aa9.92□□□□□ -0.82
PHGDH-220ENST00000641570 TEX46H3BTG2 121 aa9.92□□□□□ -0.82
PHGDH-220ENST00000641570 CD5P06127 495 aa9.92□□□□□ -0.82
PHGDH-220ENST00000641570 M6PRP20645 277 aa9.92□□□□□ -0.82
PHGDH-220ENST00000641570 RAB2AP61019 212 aa9.92□□□□□ -0.82
PHGDH-220ENST00000641570 UNQ9165/PRO28630Q6UXU0 137 aa9.92□□□□□ -0.82
PHGDH-220ENST00000641570 RBPMS2Q6ZRY4 209 aaKnown RBP9.92□□□□□ -0.82
PHGDH-220ENST00000641570 LINC00305Q7Z4B0 112 aa9.92□□□□□ -0.82
PHGDH-220ENST00000641570 OR8I2Q8N0Y5 310 aa9.92□□□□□ -0.82
PHGDH-220ENST00000641570 OR10G4Q8NGN3 311 aa9.92□□□□□ -0.82
PHGDH-220ENST00000641570 OR10G9Q8NGN4 311 aa9.92□□□□□ -0.82
PHGDH-220ENST00000641570 OR10G7Q8NGN6 311 aa9.92□□□□□ -0.82
PHGDH-220ENST00000641570 GATAD1Q8WUU5 269 aa9.92□□□□□ -0.82
PHGDH-220ENST00000641570 ST8SIA2Q92186 375 aa9.92□□□□□ -0.82
PHGDH-220ENST00000641570 MRPL32Q9BYC8 188 aaKnown RBP9.92□□□□□ -0.82
PHGDH-220ENST00000641570 DNAJC4Q9NNZ3 241 aa9.92□□□□□ -0.82
PHGDH-220ENST00000641570 MRPL27Q9P0M9 148 aaKnown RBP9.92□□□□□ -0.82
PHGDH-220ENST00000641570 IGHV7-4-1A0A0J9YVY3 117 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 WI2-2373I1.2A0A1W2PRP0 233 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 HELTA6NFD8 242 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 UMAD1C9J7I0 102 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 SEC11BP0C7V7 166 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 ATF4P18848 351 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-220ENST00000641570 GALR1P47211 349 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 PAFAH1B2P68402 229 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 PRR20EP86478 221 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 PRR20CP86479 221 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 PRR20DP86480 221 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 PRR20BP86481 221 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 PRR20AP86496 221 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 TM4SF20Q53R12 229 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 TMEM41BQ5BJD5 291 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 C9orf66Q5T8R8 295 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 FAM78BQ5VT40 261 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 FAM122CQ6P4D5 195 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 IQCF2Q8IXL9 164 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 LINC00482Q8N8I6 264 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 GPR82Q96P67 336 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 ACTR3CQ9C0K3 210 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-220ENST00000641570 SH3BGRL3Q9H299 93 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 ZFAND3Q9H8U3 227 aa9.91□□□□□ -0.82
PHGDH-220ENST00000641570 ZMAT5Q9UDW3 170 aaKnown RBP9.91□□□□□ -0.82
PHGDH-220ENST00000641570 IGHV3-49A0A0A0MS15 119 aa9.9□□□□□ -0.82
PHGDH-220ENST00000641570 C2orf70A6NJV1 201 aa9.9□□□□□ -0.82
PHGDH-220ENST00000641570 FOLR2P14207 255 aa9.9□□□□□ -0.82
PHGDH-220ENST00000641570 CDC34P49427 236 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-220ENST00000641570 RAB5CP51148 216 aa9.9□□□□□ -0.82
PHGDH-220ENST00000641570 INSL3P51460 131 aa9.9□□□□□ -0.82
PHGDH-220ENST00000641570 PLP1P60201 277 aa9.9□□□□□ -0.82
PHGDH-220ENST00000641570 USF2Q15853 346 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-220ENST00000641570 KHDC3LQ587J8 217 aa9.9□□□□□ -0.82
PHGDH-220ENST00000641570 PRR31Q5SQ13 230 aa9.9□□□□□ -0.82
PHGDH-220ENST00000641570 STXBP6Q8NFX7 210 aa9.9□□□□□ -0.82
PHGDH-220ENST00000641570 LRRC20Q8TCA0 184 aa9.9□□□□□ -0.82
PHGDH-220ENST00000641570 PHYHIPLQ96FC7 376 aa9.9□□□□□ -0.82
PHGDH-220ENST00000641570 RHPN1-AS1Q9BWJ2 59 aa9.9□□□□□ -0.82
PHGDH-220ENST00000641570 SLC25A39Q9BZJ4 359 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-220ENST00000641570 CYTL1Q9NRR1 136 aa9.9□□□□□ -0.82
PHGDH-220ENST00000641570 TECRQ9NZ01 308 aaKnown RBP9.9□□□□□ -0.82
PHGDH-220ENST00000641570 IGHV3OR16-13A0A075B7E8 117 aa9.89□□□□□ -0.83
PHGDH-220ENST00000641570 IGHV3-74A0A0B4J1X5 117 aa9.89□□□□□ -0.83
PHGDH-220ENST00000641570 IGHV3-66A0A0C4DH42 116 aa9.89□□□□□ -0.83
PHGDH-220ENST00000641570 DNASE2O00115 360 aaPredicted RBP9.89□□□□□ -0.83
PHGDH-220ENST00000641570 OR7C2O60412 319 aa9.89□□□□□ -0.83
PHGDH-220ENST00000641570 IFNA7P01567 189 aa9.89□□□□□ -0.83
PHGDH-220ENST00000641570 SPP1P10451 314 aa9.89□□□□□ -0.83
PHGDH-220ENST00000641570 RPL7P18124 248 aaKnown RBP9.89□□□□□ -0.83
PHGDH-220ENST00000641570 CBLN1P23435 193 aa9.89□□□□□ -0.83
PHGDH-220ENST00000641570 BPIFA4PQ86YQ2 179 aa9.89□□□□□ -0.83
PHGDH-220ENST00000641570 TMED6Q8WW62 240 aa9.89□□□□□ -0.83
PHGDH-220ENST00000641570 FUT9Q9Y231 359 aa9.89□□□□□ -0.83
PHGDH-220ENST00000641570 TMEM213A2RRL7 107 aa9.88□□□□□ -0.83
PHGDH-220ENST00000641570 ZNF785A8K8V0 405 aa9.88□□□□□ -0.83
PHGDH-220ENST00000641570 CRYBB3P26998 211 aa9.88□□□□□ -0.83
PHGDH-220ENST00000641570 C1orf194Q5T5A4 169 aa9.88□□□□□ -0.83
PHGDH-220ENST00000641570 SAMD13Q5VXD3 122 aa9.88□□□□□ -0.83
PHGDH-220ENST00000641570 LCN12Q6JVE5 192 aa9.88□□□□□ -0.83
PHGDH-220ENST00000641570 DPPA3Q6W0C5 159 aa9.88□□□□□ -0.83
PHGDH-220ENST00000641570 SIGLEC15Q6ZMC9 328 aa9.88□□□□□ -0.83
PHGDH-220ENST00000641570 FAM213BQ8TBF2 198 aa9.88□□□□□ -0.83
PHGDH-220ENST00000641570 UHRF2Q96PU4 802 aa9.88□□□□□ -0.83
PHGDH-220ENST00000641570 SHANK2-AS3Q9BTD1 123 aa9.88□□□□□ -0.83
PHGDH-220ENST00000641570 SMPXQ9UHP9 88 aa9.88□□□□□ -0.83
PHGDH-220ENST00000641570 ZNF98A6NK75 572 aa9.87□□□□□ -0.83
PHGDH-220ENST00000641570 H3BRN7 92 aa9.87□□□□□ -0.83
PHGDH-220ENST00000641570 C8orf88P0DMB2 117 aa9.87□□□□□ -0.83
PHGDH-220ENST00000641570 MEOX2P50222 304 aa9.87□□□□□ -0.83
PHGDH-220ENST00000641570 TCF24Q7RTU0 167 aa9.87□□□□□ -0.83
PHGDH-220ENST00000641570 OR2K2Q8NGT1 345 aa9.87□□□□□ -0.83
PHGDH-220ENST00000641570 RNF141Q8WVD5 230 aa9.87□□□□□ -0.83
PHGDH-220ENST00000641570 BOLA1Q9Y3E2 137 aa9.87□□□□□ -0.83
PHGDH-220ENST00000641570 IGKV3-7A0A075B6H7 116 aa9.86□□□□□ -0.83
PHGDH-220ENST00000641570 CHEK1O14757 476 aa9.86□□□□□ -0.83
PHGDH-220ENST00000641570 CSN3P07498 182 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms