RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 JTBO76095 146 aa12.94□□□□□ -0.34
PTPN11-207ENST00000639857 SCGB1D2O95969 90 aa12.94□□□□□ -0.34
PTPN11-207ENST00000639857 ID1P41134 155 aa12.94□□□□□ -0.34
PTPN11-207ENST00000639857 PSMB3P49720 205 aa12.94□□□□□ -0.34
PTPN11-207ENST00000639857 MEOX2P50222 304 aa12.94□□□□□ -0.34
PTPN11-207ENST00000639857 OR8I2Q8N0Y5 310 aa12.94□□□□□ -0.34
PTPN11-207ENST00000639857 OR10P1Q8NGE3 313 aa12.94□□□□□ -0.34
PTPN11-207ENST00000639857 PTTG2Q9NZH5 202 aa12.94□□□□□ -0.34
PTPN11-207ENST00000639857 KNCNA6PVL3 124 aa12.93□□□□□ -0.34
PTPN11-207ENST00000639857 H2AFB2P0C5Z0 115 aa12.93□□□□□ -0.34
PTPN11-207ENST00000639857 NUTF2P61970 127 aaKnown RBP12.93□□□□□ -0.34
PTPN11-207ENST00000639857 SELENOTP62341 195 aa12.93□□□□□ -0.34
PTPN11-207ENST00000639857 GPR82Q96P67 336 aa12.93□□□□□ -0.34
PTPN11-207ENST00000639857 GGACTQ9BVM4 153 aa12.93□□□□□ -0.34
PTPN11-207ENST00000639857 GSKIPQ9P0R6 139 aa12.93□□□□□ -0.34
PTPN11-207ENST00000639857 TBC1D24Q9ULP9 559 aa12.93□□□□□ -0.34
PTPN11-207ENST00000639857 CXorf65A6NEN9 183 aa12.92□□□□□ -0.34
PTPN11-207ENST00000639857 K7EPK0 472 aa12.92□□□□□ -0.34
PTPN11-207ENST00000639857 ISLRO14498 428 aa12.92□□□□□ -0.34
PTPN11-207ENST00000639857 SOCS3O14543 225 aa12.92□□□□□ -0.34
PTPN11-207ENST00000639857 MBPP02686 304 aaPredicted RBP12.92□□□□□ -0.34
PTPN11-207ENST00000639857 GIG44P09565 113 aaPredicted RBP12.92□□□□□ -0.34
PTPN11-207ENST00000639857 HLA-DRB4P13762 266 aa12.92□□□□□ -0.34
PTPN11-207ENST00000639857 GALR1P47211 349 aa12.92□□□□□ -0.34
PTPN11-207ENST00000639857 PLP1P60201 277 aa12.92□□□□□ -0.34
PTPN11-207ENST00000639857 CYP2G1PQ6ZSU1 146 aa12.92□□□□□ -0.34
PTPN11-207ENST00000639857 S100A7AQ86SG5 101 aa12.92□□□□□ -0.34
PTPN11-207ENST00000639857 C12orf45Q8N5I9 185 aaPredicted RBP12.92□□□□□ -0.34
PTPN11-207ENST00000639857 TMEM147Q9BVK8 224 aa12.92□□□□□ -0.34
PTPN11-207ENST00000639857 C1QTNF4Q9BXJ3 329 aa12.92□□□□□ -0.34
PTPN11-207ENST00000639857 NPVFQ9HCQ7 196 aa12.92□□□□□ -0.34
PTPN11-207ENST00000639857 MGAT4CQ9UBM8 478 aa12.92□□□□□ -0.34
PTPN11-207ENST00000639857 HLA-DRB4X5D2U9 266 aa12.92□□□□□ -0.34
PTPN11-207ENST00000639857 SACSQ9NZJ4 4579 aa12.92□□□□□ -0.34
PTPN11-207ENST00000639857 SMCO3A2RU48 225 aa12.91□□□□□ -0.34
PTPN11-207ENST00000639857 ZNF98A6NK75 572 aa12.91□□□□□ -0.34
PTPN11-207ENST00000639857 METTL15P1P0C7V9 234 aa12.91□□□□□ -0.34
PTPN11-207ENST00000639857 C4BPBP20851 252 aa12.91□□□□□ -0.34
PTPN11-207ENST00000639857 EWSR1Q01844 656 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTPN11-207ENST00000639857 SPATA31B1PQ5VZV4 182 aa12.91□□□□□ -0.34
PTPN11-207ENST00000639857 CLUHP3Q96NS8 147 aa12.91□□□□□ -0.34
PTPN11-207ENST00000639857 SEC22CQ9BRL7 303 aa12.91□□□□□ -0.34
PTPN11-207ENST00000639857 MFFQ9GZY8 342 aa12.91□□□□□ -0.34
PTPN11-207ENST00000639857 RNF24Q9Y225 148 aa12.91□□□□□ -0.34
PTPN11-207ENST00000639857 C7orf66A4D0T2 115 aa12.9□□□□□ -0.34
PTPN11-207ENST00000639857 ZNF705EA8MWA4 302 aaPredicted RBP12.9□□□□□ -0.34
PTPN11-207ENST00000639857 H3BMM0 161 aa12.9□□□□□ -0.34
PTPN11-207ENST00000639857 UPK1BO75841 260 aa12.9□□□□□ -0.34
PTPN11-207ENST00000639857 IL5P05113 134 aa12.9□□□□□ -0.34
PTPN11-207ENST00000639857 TEPPQ6URK8 271 aa12.9□□□□□ -0.34
PTPN11-207ENST00000639857 FOXI2Q6ZQN5 318 aa12.9□□□□□ -0.34
PTPN11-207ENST00000639857 OR1B1Q8NGR6 318 aa12.9□□□□□ -0.34
PTPN11-207ENST00000639857 C2orf50Q96LR7 162 aa12.9□□□□□ -0.34
PTPN11-207ENST00000639857 C5orf51A6NDU8 294 aa12.89□□□□□ -0.35
PTPN11-207ENST00000639857 L7N2F9 121 aa12.89□□□□□ -0.35
PTPN11-207ENST00000639857 CCSO14618 274 aa12.89□□□□□ -0.35
PTPN11-207ENST00000639857 CCNKO75909 580 aa12.89□□□□□ -0.35
PTPN11-207ENST00000639857 MIFP14174 115 aa12.89□□□□□ -0.35
PTPN11-207ENST00000639857 ORM2P19652 201 aa12.89□□□□□ -0.35
PTPN11-207ENST00000639857 RAP2BP61225 183 aa12.89□□□□□ -0.35
PTPN11-207ENST00000639857 VAMP2P63027 116 aa12.89□□□□□ -0.35
PTPN11-207ENST00000639857 PXDC1Q5TGL8 231 aa12.89□□□□□ -0.35
PTPN11-207ENST00000639857 CEMP1Q6PRD7 247 aaPredicted RBP12.89□□□□□ -0.35
PTPN11-207ENST00000639857 TMEM182Q6ZP80 229 aaPredicted RBP12.89□□□□□ -0.35
PTPN11-207ENST00000639857 SLC25A32Q9H2D1 315 aa12.89□□□□□ -0.35
PTPN11-207ENST00000639857 SAV1Q9H4B6 383 aaPredicted RBP12.89□□□□□ -0.35
PTPN11-207ENST00000639857 FAM25EA8MYX2 175 aa12.88□□□□□ -0.35
PTPN11-207ENST00000639857 H3BRN7 92 aa12.88□□□□□ -0.35
PTPN11-207ENST00000639857 HYPMO75409 117 aa12.88□□□□□ -0.35
PTPN11-207ENST00000639857 DEDDO75618 318 aa12.88□□□□□ -0.35
PTPN11-207ENST00000639857 LINC00869P0C866 280 aa12.88□□□□□ -0.35
PTPN11-207ENST00000639857 PVALBP20472 110 aaPredicted RBP12.88□□□□□ -0.35
PTPN11-207ENST00000639857 GATA2P23769 480 aaPredicted RBP12.88□□□□□ -0.35
PTPN11-207ENST00000639857 RRAS2P62070 204 aaPredicted RBP12.88□□□□□ -0.35
PTPN11-207ENST00000639857 PMS2P11Q13670 270 aa12.88□□□□□ -0.35
PTPN11-207ENST00000639857 GSG1LQ6UXU4 331 aa12.88□□□□□ -0.35
PTPN11-207ENST00000639857 ZNF546Q86UE3 836 aa12.88□□□□□ -0.35
PTPN11-207ENST00000639857 Q8NAQ8 132 aa12.88□□□□□ -0.35
PTPN11-207ENST00000639857 CSNK1G2-AS1Q8NCQ2 148 aa12.88□□□□□ -0.35
PTPN11-207ENST00000639857 ENKURQ8TC29 256 aa12.88□□□□□ -0.35
PTPN11-207ENST00000639857 LYSTQ99698 3801 aa12.88□□□□□ -0.35
PTPN11-207ENST00000639857 SLC25A22Q9H936 323 aa12.88□□□□□ -0.35
PTPN11-207ENST00000639857 HIGD1AQ9Y241 93 aa12.88□□□□□ -0.35
PTPN11-207ENST00000639857 KLK5Q9Y337 293 aaPredicted RBP12.88□□□□□ -0.35
PTPN11-207ENST00000639857 RYR2Q92736 4967 aa12.87□□□□□ -0.35
PTPN11-207ENST00000639857 C11orf45Q8TAV5 145 aa12.87□□□□□ -0.35
PTPN11-207ENST00000639857 LINC00052Q96N35 136 aa12.87□□□□□ -0.35
PTPN11-207ENST00000639857 SHANK2-AS3Q9BTD1 123 aa12.87□□□□□ -0.35
PTPN11-207ENST00000639857 SLC25A39Q9BZJ4 359 aaPredicted RBP12.87□□□□□ -0.35
PTPN11-207ENST00000639857 HRH4Q9H3N8 390 aa12.87□□□□□ -0.35
PTPN11-207ENST00000639857 GPN1Q9HCN4 374 aaPredicted RBP12.87□□□□□ -0.35
PTPN11-207ENST00000639857 BATF3Q9NR55 127 aa12.87□□□□□ -0.35
PTPN11-207ENST00000639857 RPL7P18124 248 aaKnown RBP12.86□□□□□ -0.35
PTPN11-207ENST00000639857 SCRT1Q9BWW7 348 aa12.86□□□□□ -0.35
PTPN11-207ENST00000639857 C11orf1Q9H5F2 150 aa12.86□□□□□ -0.35
PTPN11-207ENST00000639857 RPRMQ9NS64 109 aa12.86□□□□□ -0.35
PTPN11-207ENST00000639857 LSM5Q9Y4Y9 91 aaKnown RBP12.86□□□□□ -0.35
PTPN11-207ENST00000639857 CAV2P51636 162 aa12.85□□□□□ -0.35
PTPN11-207ENST00000639857 SLC38A11Q08AI6 406 aa12.85□□□□□ -0.35
PTPN11-207ENST00000639857 ARL16Q0P5N6 197 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms