RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 POLR2GP62487 172 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLN6-221ENST00000637494 ID3Q02535 119 aa13.77□□□□□ -0.21
CLN6-221ENST00000637494 SPATA31B1PQ5VZV4 182 aa13.77□□□□□ -0.21
CLN6-221ENST00000637494 TMEM147Q9BVK8 224 aa13.77□□□□□ -0.21
CLN6-221ENST00000637494 XCL2Q9UBD3 114 aa13.77□□□□□ -0.21
CLN6-221ENST00000637494 IGKV1OR2-108A0A075B7D4 117 aa13.76□□□□□ -0.21
CLN6-221ENST00000637494 PRSS46E5RG02 174 aa13.76□□□□□ -0.21
CLN6-221ENST00000637494 ISLRO14498 428 aa13.76□□□□□ -0.21
CLN6-221ENST00000637494 SSSCA1O60232 199 aa13.76□□□□□ -0.21
CLN6-221ENST00000637494 IL7P13232 177 aa13.76□□□□□ -0.21
CLN6-221ENST00000637494 ORM2P19652 201 aa13.76□□□□□ -0.21
CLN6-221ENST00000637494 EBLN2Q6P2I7 272 aa13.76□□□□□ -0.21
CLN6-221ENST00000637494 FOXI2Q6ZQN5 318 aa13.76□□□□□ -0.21
CLN6-221ENST00000637494 ACOT7LQ6ZUV0 252 aa13.76□□□□□ -0.21
CLN6-221ENST00000637494 GPR82Q96P67 336 aa13.76□□□□□ -0.21
CLN6-221ENST00000637494 SLC25A22Q9H936 323 aa13.76□□□□□ -0.21
CLN6-221ENST00000637494 SCGB1D2O95969 90 aa13.75□□□□□ -0.21
CLN6-221ENST00000637494 RBMY1A1P0DJD3 496 aaKnown RBP13.75□□□□□ -0.21
CLN6-221ENST00000637494 RBMY1CP0DJD4 496 aa13.75□□□□□ -0.21
CLN6-221ENST00000637494 ANXA7P20073 488 aaKnown RBP13.75□□□□□ -0.21
CLN6-221ENST00000637494 RBMY1FQ15415 496 aaKnown RBP13.75□□□□□ -0.21
CLN6-221ENST00000637494 TMEM144Q7Z5S9 345 aa13.75□□□□□ -0.21
CLN6-221ENST00000637494 S100A7AQ86SG5 101 aa13.75□□□□□ -0.21
CLN6-221ENST00000637494 CSNK1G2-AS1Q8NCQ2 148 aa13.75□□□□□ -0.21
CLN6-221ENST00000637494 OR4D5Q8NGN0 318 aa13.75□□□□□ -0.21
CLN6-221ENST00000637494 OR1B1Q8NGR6 318 aa13.75□□□□□ -0.21
CLN6-221ENST00000637494 C16orf92Q96LL3 132 aa13.75□□□□□ -0.21
CLN6-221ENST00000637494 WDR12Q9GZL7 423 aaKnown RBP13.75□□□□□ -0.21
CLN6-221ENST00000637494 SAV1Q9H4B6 383 aaPredicted RBP13.75□□□□□ -0.21
CLN6-221ENST00000637494 RPRMQ9NS64 109 aa13.75□□□□□ -0.21
CLN6-221ENST00000637494 X6R8D5 127 aa13.75□□□□□ -0.21
CLN6-221ENST00000637494 IGKV3-20P01619 116 aa13.74□□□□□ -0.21
CLN6-221ENST00000637494 IL5P05113 134 aa13.74□□□□□ -0.21
CLN6-221ENST00000637494 IAH1Q2TAA2 248 aaPredicted RBP13.74□□□□□ -0.21
CLN6-221ENST00000637494 LGALS9CQ6DKI2 356 aa13.74□□□□□ -0.21
CLN6-221ENST00000637494 OR4B1Q8NGF8 309 aa13.74□□□□□ -0.21
CLN6-221ENST00000637494 SMIM8Q96KF7 97 aa13.74□□□□□ -0.21
CLN6-221ENST00000637494 SDHCQ99643 169 aaPredicted RBP13.74□□□□□ -0.21
CLN6-221ENST00000637494 AGRNO00468 2067 aa13.73□□□□□ -0.21
CLN6-221ENST00000637494 TRAV10A0A0B4J240 114 aa13.73□□□□□ -0.21
CLN6-221ENST00000637494 ZNF98A6NK75 572 aa13.73□□□□□ -0.21
CLN6-221ENST00000637494 HLA-DMBP28068 263 aa13.73□□□□□ -0.21
CLN6-221ENST00000637494 RAP2BP61225 183 aa13.73□□□□□ -0.21
CLN6-221ENST00000637494 OR10P1Q8NGE3 313 aa13.73□□□□□ -0.21
CLN6-221ENST00000637494 GSKIPQ9P0R6 139 aa13.73□□□□□ -0.21
CLN6-221ENST00000637494 MGAT4CQ9UBM8 478 aa13.73□□□□□ -0.21
CLN6-221ENST00000637494 IGLL5B9A064 214 aa13.72□□□□□ -0.21
CLN6-221ENST00000637494 BTCP35070 178 aa13.72□□□□□ -0.21
CLN6-221ENST00000637494 SELENOTP62341 195 aa13.72□□□□□ -0.21
CLN6-221ENST00000637494 ZNF846Q147U1 533 aa13.72□□□□□ -0.21
CLN6-221ENST00000637494 CYP2G1PQ6ZSU1 146 aa13.72□□□□□ -0.21
CLN6-221ENST00000637494 MITD1Q8WV92 249 aa13.72□□□□□ -0.21
CLN6-221ENST00000637494 CLUHP3Q96NS8 147 aa13.72□□□□□ -0.21
CLN6-221ENST00000637494 RSG1Q9BU20 258 aa13.72□□□□□ -0.21
CLN6-221ENST00000637494 C20orf85Q9H1P6 137 aa13.72□□□□□ -0.21
CLN6-221ENST00000637494 SLC25A32Q9H2D1 315 aa13.72□□□□□ -0.21
CLN6-221ENST00000637494 SOCS3O14543 225 aa13.71□□□□□ -0.21
CLN6-221ENST00000637494 LYRM1O43325 122 aa13.71□□□□□ -0.21
CLN6-221ENST00000637494 GATA2P23769 480 aaPredicted RBP13.71□□□□□ -0.21
CLN6-221ENST00000637494 TAS2R30P59541 319 aa13.71□□□□□ -0.21
CLN6-221ENST00000637494 DLK1P80370 383 aa13.71□□□□□ -0.21
CLN6-221ENST00000637494 GDF5OSQ5U4N7 250 aa13.71□□□□□ -0.21
CLN6-221ENST00000637494 ZBTB8BQ8NAP8 495 aaPredicted RBP13.71□□□□□ -0.21
CLN6-221ENST00000637494 NPVFQ9HCQ7 196 aa13.71□□□□□ -0.21
CLN6-221ENST00000637494 RNF24Q9Y225 148 aa13.71□□□□□ -0.21
CLN6-221ENST00000637494 HIGD1AQ9Y241 93 aa13.71□□□□□ -0.21
CLN6-221ENST00000637494 ELOA3CA0A087WX78 387 aaPredicted RBP13.7□□□□□ -0.22
CLN6-221ENST00000637494 TMEM189A5PLL7 270 aa13.7□□□□□ -0.22
CLN6-221ENST00000637494 SMIM9A6NGZ8 99 aa13.7□□□□□ -0.22
CLN6-221ENST00000637494 FNDC10F2Z333 226 aa13.7□□□□□ -0.22
CLN6-221ENST00000637494 TSC22D2O75157 780 aa13.7□□□□□ -0.22
CLN6-221ENST00000637494 METTL15P1P0C7V9 234 aa13.7□□□□□ -0.22
CLN6-221ENST00000637494 FXYD7P58549 80 aa13.7□□□□□ -0.22
CLN6-221ENST00000637494 RRAS2P62070 204 aaPredicted RBP13.7□□□□□ -0.22
CLN6-221ENST00000637494 PSG9Q00887 426 aa13.7□□□□□ -0.22
CLN6-221ENST00000637494 NEU1Q99519 415 aa13.7□□□□□ -0.22
CLN6-221ENST00000637494 DOK5Q9P104 306 aa13.7□□□□□ -0.22
CLN6-221ENST00000637494 DNAH1Q9P2D7 4330 aa13.7□□□□□ -0.22
CLN6-221ENST00000637494 IGHV3OR16-12A0A075B7B8 117 aa13.69□□□□□ -0.22
CLN6-221ENST00000637494 L7N2F9 121 aa13.69□□□□□ -0.22
CLN6-221ENST00000637494 HYPMO75409 117 aa13.69□□□□□ -0.22
CLN6-221ENST00000637494 OR5G3P0C626 314 aa13.69□□□□□ -0.22
CLN6-221ENST00000637494 PAX9P55771 341 aa13.69□□□□□ -0.22
CLN6-221ENST00000637494 DEFB1P60022 68 aa13.69□□□□□ -0.22
CLN6-221ENST00000637494 VAMP2P63027 116 aa13.69□□□□□ -0.22
CLN6-221ENST00000637494 FAM78BQ5VT40 261 aa13.69□□□□□ -0.22
CLN6-221ENST00000637494 Q6ZTC4 211 aa13.69□□□□□ -0.22
CLN6-221ENST00000637494 SLC25A39Q9BZJ4 359 aaPredicted RBP13.69□□□□□ -0.22
CLN6-221ENST00000637494 GOLT1BQ9Y3E0 138 aa13.69□□□□□ -0.22
CLN6-221ENST00000637494 A0A0J9YX75 114 aa13.68□□□□□ -0.22
CLN6-221ENST00000637494 TCRBP04435 133 aa13.68□□□□□ -0.22
CLN6-221ENST00000637494 LINC00869P0C866 280 aa13.68□□□□□ -0.22
CLN6-221ENST00000637494 RPL7P18124 248 aaKnown RBP13.68□□□□□ -0.22
CLN6-221ENST00000637494 FGL1Q08830 312 aa13.68□□□□□ -0.22
CLN6-221ENST00000637494 TEPPQ6URK8 271 aa13.68□□□□□ -0.22
CLN6-221ENST00000637494 TMEM14EPQ6UXP3 125 aa13.68□□□□□ -0.22
CLN6-221ENST00000637494 ZNF705AQ6ZN79 300 aaPredicted RBP13.68□□□□□ -0.22
CLN6-221ENST00000637494 TMEM182Q6ZP80 229 aaPredicted RBP13.68□□□□□ -0.22
CLN6-221ENST00000637494 PMS2P5A8MQ11 134 aa13.67□□□□□ -0.22
CLN6-221ENST00000637494 FAM25EA8MYX2 175 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms