RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 A0A087X0T9 212 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 TRAV5A0A0B4J249 113 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 IGHV1-18A0A0C4DH31 117 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 A0A0J9YX75 114 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 A0A1B0GVG6 124 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 E7EQ34 232 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 TAX1BP3O14907 124 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 OR2T1O43869 369 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 GGCTO75223 188 aaKnown RBP0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 NDUFC2O95298 119 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 BPGMP07738 259 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 HTR1AP08908 422 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 SCTP09683 121 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 UCHL1P09936 223 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 SMIM17P0DL12 118 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 ZNF93P35789 620 aaPredicted RBP0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 CCR2P41597 374 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 EMP1P54849 157 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 DEFA3P59666 94 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 YPEL3P61236 119 aaPredicted RBP0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 AP1S1P61966 158 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 PSPHP78330 225 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 ZNF90Q03938 601 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 AKR1C1Q04828 323 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 SLC38A11Q08AI6 406 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 PLCXD2Q0VAA5 305 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 NNATQ16517 81 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 SCGB2B2Q4G0G5 96 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 FKBP1CQ5VVH2 108 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 SAMD13Q5VXD3 122 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 HRCT1Q6UXD1 115 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 AAED1Q7RTV5 226 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 DEFB128Q7Z7B8 93 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 MSRB3Q8IXL7 192 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 OR5J2Q8NH18 312 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 CCL4L1Q8NHW4 92 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 NAT14Q8WUY8 206 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 ZC2HC1AQ96GY0 325 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 IMMP2LQ96T52 175 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 MUC4Q99102 2169 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 GPER1Q99527 375 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 MGLLQ99685 303 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 EFCAB11Q9BUY7 163 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 MRPL32Q9BYC8 188 aaKnown RBP0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 CCDC90BQ9GZT6 254 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 C6orf62Q9GZU0 229 aaPredicted RBP0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 OTORQ9NRC9 128 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 PCTPQ9UKL6 214 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 EPDR1Q9UM22 224 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 SSR3Q9UNL2 185 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 HHLA3Q9XRX5 114 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 RNF11Q9Y3C5 154 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 SOX21Q9Y651 276 aaPredicted RBP0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 LHFPL6Q9Y693 200 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 KIAA1549Q9HCM3 1950 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 ZNF142P52746 1687 aaPredicted RBP0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 MYH13Q9UKX3 1938 aa0.68□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 WDR7Q9Y4E6 1490 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 ANK1P16157 1881 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 EIF4G3O43432 1585 aaKnown RBP0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 OVOS2A0A0J9YW53 1432 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 DISP2A7MBM2 1401 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 OVOS2Q6IE36 1432 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 IGHV3-64A0A075B6Q5 118 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 TRGV4A0A0C4DH28 118 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 LOC107984640A0A0U1RRK4 108 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 DUXBA0A1W2PPF3 345 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 RIIAD1A6NNX1 92 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 ZNF705FA8MVS1 300 aaPredicted RBP0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 IBA57-AS1B1ANH7 110 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 B4DSR2 109 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 H3BT86 120 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 H7C2G1 150 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 J3KT08 172 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 UBE2L6O14933 153 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 GADD45GO95257 159 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 BCL2P10415 239 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 DEFA4P12838 97 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 MIFP14174 115 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 CASP1P29466 404 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 DYNLT3P51808 116 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 FXYD2P54710 66 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 ROMO1P60602 79 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 UBE2BP63146 152 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 RHEBQ15382 184 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 LGALSLQ3ZCW2 172 aaPredicted RBP0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 Q6ZQT0 140 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 Q8IYB0 196 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 HIST3H2BBQ8N257 126 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 LRRC18Q8N456 261 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 FAM24BQ8N5W8 94 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 OR8J3Q8NGG0 315 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 OR4D11Q8NGI4 311 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 OR9Q1Q8NGQ5 310 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 OR4C6Q8NH72 309 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 SKA2Q8WVK7 121 aaPredicted RBP0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 FGF13Q92913 245 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 DIRC1Q969H9 104 aa0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 MRPS24Q96EL2 167 aaKnown RBP0.67□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 BORCS8Q96FH0 119 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms