RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 FNDC4Q9H6D8 234 aaPredicted RBP9.68□□□□□ -0.86
SHPRH-211ENST00000629427 A0A0A6YYD4 124 aa9.68□□□□□ -0.86
SHPRH-211ENST00000629427 NRN1Q9NPD7 142 aa9.68□□□□□ -0.86
SHPRH-211ENST00000629427 TMEM249Q2WGJ8 235 aa9.68□□□□□ -0.86
SHPRH-211ENST00000629427 PPBPP02775 128 aa9.68□□□□□ -0.86
SHPRH-211ENST00000629427 LAIR2Q6ISS4 152 aa9.68□□□□□ -0.86
SHPRH-211ENST00000629427 MORN3Q6PF18 240 aaPredicted RBP9.68□□□□□ -0.86
SHPRH-211ENST00000629427 SHANK1Q9Y566 2161 aa9.68□□□□□ -0.86
SHPRH-211ENST00000629427 M0R2P5 195 aa9.68□□□□□ -0.86
SHPRH-211ENST00000629427 FRMPD3Q5JV73 1810 aa9.68□□□□□ -0.86
SHPRH-211ENST00000629427 PAX4O43316 350 aa9.68□□□□□ -0.86
SHPRH-211ENST00000629427 PSG1P11464 419 aa9.68□□□□□ -0.86
SHPRH-211ENST00000629427 GTF3AQ92664 365 aaKnown RBP9.68□□□□□ -0.86
SHPRH-211ENST00000629427 RNF126Q9BV68 326 aa9.68□□□□□ -0.86
SHPRH-211ENST00000629427 RPL36AP83881 106 aaKnown RBP9.67□□□□□ -0.86
SHPRH-211ENST00000629427 FOXL1Q12952 345 aa9.67□□□□□ -0.86
SHPRH-211ENST00000629427 C10orf55Q5SWW7 151 aa9.67□□□□□ -0.86
SHPRH-211ENST00000629427 OCC1Q8TAD7 63 aa9.67□□□□□ -0.86
SHPRH-211ENST00000629427 RPL36ALQ969Q0 106 aaKnown RBP9.67□□□□□ -0.86
SHPRH-211ENST00000629427 ZNF319Q9P2F9 582 aa9.67□□□□□ -0.86
SHPRH-211ENST00000629427 CD300EQ496F6 205 aaPredicted RBP9.67□□□□□ -0.86
SHPRH-211ENST00000629427 ZNF876PQ49A33 203 aa9.67□□□□□ -0.86
SHPRH-211ENST00000629427 PAQR4Q8N4S7 273 aaPredicted RBP9.67□□□□□ -0.86
SHPRH-211ENST00000629427 A0A1W2PRE2 83 aa9.67□□□□□ -0.86
SHPRH-211ENST00000629427 DENND4AQ7Z401 1863 aa9.67□□□□□ -0.86
SHPRH-211ENST00000629427 FAM90A9PA6NNJ1 464 aa9.67□□□□□ -0.86
SHPRH-211ENST00000629427 SPSB3Q6PJ21 355 aa9.67□□□□□ -0.86
SHPRH-211ENST00000629427 FLVCR1-AS1Q8TAF5 88 aa9.67□□□□□ -0.86
SHPRH-211ENST00000629427 NAPSAO96009 420 aa9.67□□□□□ -0.86
SHPRH-211ENST00000629427 CCL1P22362 96 aa9.67□□□□□ -0.86
SHPRH-211ENST00000629427 RNF114Q9Y508 228 aa9.67□□□□□ -0.86
SHPRH-211ENST00000629427 CD5P06127 495 aa9.67□□□□□ -0.86
SHPRH-211ENST00000629427 FOXG1P55316 489 aaPredicted RBP9.67□□□□□ -0.86
SHPRH-211ENST00000629427 OSTCQ9NRP0 149 aa9.67□□□□□ -0.86
SHPRH-211ENST00000629427 INS-IGF2F8WCM5 200 aa9.66□□□□□ -0.86
SHPRH-211ENST00000629427 H3BUT2 72 aa9.66□□□□□ -0.86
SHPRH-211ENST00000629427 INSP01308 110 aa9.66□□□□□ -0.86
SHPRH-211ENST00000629427 SLC25A48Q6ZT89 311 aaKnown RBP9.66□□□□□ -0.86
SHPRH-211ENST00000629427 A0A087WV48 116 aa9.66□□□□□ -0.86
SHPRH-211ENST00000629427 BUB1B-PAK6H3BSN5 160 aa9.66□□□□□ -0.86
SHPRH-211ENST00000629427 LY6HO94772 140 aa9.66□□□□□ -0.86
SHPRH-211ENST00000629427 C1QL4Q86Z23 238 aa9.66□□□□□ -0.86
SHPRH-211ENST00000629427 IFITM2Q01629 132 aa9.66□□□□□ -0.86
SHPRH-211ENST00000629427 ERCC8Q13216 396 aa9.66□□□□□ -0.86
SHPRH-211ENST00000629427 HEPN1Q6WQI6 88 aa9.66□□□□□ -0.86
SHPRH-211ENST00000629427 PLXNA3P51805 1871 aa9.66□□□□□ -0.86
SHPRH-211ENST00000629427 BPESC1Q9GZL8 116 aa9.66□□□□□ -0.86
SHPRH-211ENST00000629427 M0R1W7 72 aa9.65□□□□□ -0.86
SHPRH-211ENST00000629427 TOMM40O96008 361 aa9.65□□□□□ -0.86
SHPRH-211ENST00000629427 RPUSD1Q9UJJ7 312 aaKnown RBP9.65□□□□□ -0.86
SHPRH-211ENST00000629427 SRRM5B3KS81 715 aa9.65□□□□□ -0.86
SHPRH-211ENST00000629427 IFI27L1Q96BM0 104 aa9.65□□□□□ -0.86
SHPRH-211ENST00000629427 C5orf30Q96GV9 206 aa9.65□□□□□ -0.86
SHPRH-211ENST00000629427 DERL1Q9BUN8 251 aa9.65□□□□□ -0.86
SHPRH-211ENST00000629427 GNB1LQ9BYB4 327 aa9.65□□□□□ -0.86
SHPRH-211ENST00000629427 LAMTOR3Q9UHA4 124 aa9.65□□□□□ -0.86
SHPRH-211ENST00000629427 RNF222A6NCQ9 220 aa9.65□□□□□ -0.86
SHPRH-211ENST00000629427 KLF17Q5JT82 389 aaPredicted RBP9.65□□□□□ -0.86
SHPRH-211ENST00000629427 CARHSP1Q9Y2V2 147 aaKnown RBP9.65□□□□□ -0.86
SHPRH-211ENST00000629427 RNF223E7ERA6 249 aa9.65□□□□□ -0.86
SHPRH-211ENST00000629427 CSRP3P50461 194 aa9.65□□□□□ -0.86
SHPRH-211ENST00000629427 SP5Q6BEB4 398 aaPredicted RBP9.65□□□□□ -0.86
SHPRH-211ENST00000629427 USMG5Q96IX5 58 aa9.65□□□□□ -0.86
SHPRH-211ENST00000629427 C1QTNF4Q9BXJ3 329 aa9.65□□□□□ -0.86
SHPRH-211ENST00000629427 PRDM13Q9H4Q3 707 aa9.65□□□□□ -0.86
SHPRH-211ENST00000629427 TRAV8-4A0A0B4J246 113 aa9.65□□□□□ -0.87
SHPRH-211ENST00000629427 MAPK1IP1LQ8NDC0 245 aa9.65□□□□□ -0.87
SHPRH-211ENST00000629427 SPTAN1Q13813 2472 aaKnown RBP9.65□□□□□ -0.87
SHPRH-211ENST00000629427 ZNF138P52744 262 aa9.64□□□□□ -0.87
SHPRH-211ENST00000629427 TBX6O95947 436 aaPredicted RBP9.64□□□□□ -0.87
SHPRH-211ENST00000629427 C6orf226Q5I0X4 101 aa9.64□□□□□ -0.87
SHPRH-211ENST00000629427 ATP5L2Q7Z4Y8 100 aa9.64□□□□□ -0.87
SHPRH-211ENST00000629427 LINC00518Q8N0U6 118 aa9.64□□□□□ -0.87
SHPRH-211ENST00000629427 RNF166Q96A37 237 aaPredicted RBP9.64□□□□□ -0.87
SHPRH-211ENST00000629427 LCN12Q6JVE5 192 aa9.64□□□□□ -0.87
SHPRH-211ENST00000629427 CD177Q8N6Q3 437 aa9.64□□□□□ -0.87
SHPRH-211ENST00000629427 CHCHD1Q96BP2 118 aaKnown RBP9.64□□□□□ -0.87
SHPRH-211ENST00000629427 CLDN16Q9Y5I7 305 aa9.64□□□□□ -0.87
SHPRH-211ENST00000629427 PCNX2A6NKB5 2137 aa9.64□□□□□ -0.87
SHPRH-211ENST00000629427 NCR2O95944 276 aa9.64□□□□□ -0.87
SHPRH-211ENST00000629427 C5orf64Q2M2E5 130 aa9.64□□□□□ -0.87
SHPRH-211ENST00000629427 TEX43Q6ZNM6 134 aa9.64□□□□□ -0.87
SHPRH-211ENST00000629427 TSKUQ8WUA8 353 aa9.64□□□□□ -0.87
SHPRH-211ENST00000629427 COL8A2P25067 703 aa9.64□□□□□ -0.87
SHPRH-211ENST00000629427 NLRC5Q86WI3 1866 aa9.63□□□□□ -0.87
SHPRH-211ENST00000629427 Q0VFX4 171 aa9.63□□□□□ -0.87
SHPRH-211ENST00000629427 ERG28Q9UKR5 140 aa9.63□□□□□ -0.87
SHPRH-211ENST00000629427 LSM4Q9Y4Z0 139 aaKnown RBP9.63□□□□□ -0.87
SHPRH-211ENST00000629427 FAM223BA6NKX1 122 aa9.63□□□□□ -0.87
SHPRH-211ENST00000629427 DEFB130BP0DP73 79 aa9.63□□□□□ -0.87
SHPRH-211ENST00000629427 DEFB130AP0DP74 79 aa9.63□□□□□ -0.87
SHPRH-211ENST00000629427 SAA4P35542 130 aa9.63□□□□□ -0.87
SHPRH-211ENST00000629427 FAM223AQ8IWN6 122 aa9.63□□□□□ -0.87
SHPRH-211ENST00000629427 Q71RC1 249 aaPredicted RBP9.63□□□□□ -0.87
SHPRH-211ENST00000629427 LINC00477Q96M19 166 aa9.63□□□□□ -0.87
SHPRH-211ENST00000629427 MGST2Q99735 147 aa9.63□□□□□ -0.87
SHPRH-211ENST00000629427 LINC00587B1AMM8 73 aa9.63□□□□□ -0.87
SHPRH-211ENST00000629427 TMEM170AQ8WVE7 144 aa9.63□□□□□ -0.87
SHPRH-211ENST00000629427 GGTLC1Q9BX51 225 aa9.63□□□□□ -0.87
SHPRH-211ENST00000629427 D6R8Y8 96 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms