RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 SYT8Q8NBV8 401 aa9.72□□□□□ -0.85
SNX1-214ENST00000625244 STXBP6Q8NFX7 210 aa9.72□□□□□ -0.85
SNX1-214ENST00000625244 LHFPL5Q8TAF8 219 aa9.72□□□□□ -0.85
SNX1-214ENST00000625244 GRAMD2BQ96HH9 432 aa9.72□□□□□ -0.85
SNX1-214ENST00000625244 RAB40CQ96S21 281 aa9.72□□□□□ -0.85
SNX1-214ENST00000625244 KRTAP3-3Q9BYR6 98 aa9.72□□□□□ -0.85
SNX1-214ENST00000625244 KRTAP3-2Q9BYR7 98 aa9.72□□□□□ -0.85
SNX1-214ENST00000625244 PRR13Q9NZ81 148 aa9.72□□□□□ -0.85
SNX1-214ENST00000625244 CACNG5Q9UF02 275 aa9.72□□□□□ -0.85
SNX1-214ENST00000625244 LINC00588Q9Y4M8 146 aa9.72□□□□□ -0.85
SNX1-214ENST00000625244 KRTAP29-1A8MX34 341 aaPredicted RBP9.71□□□□□ -0.86
SNX1-214ENST00000625244 FAM229AH3BQW9 127 aa9.71□□□□□ -0.86
SNX1-214ENST00000625244 ERHP84090 104 aaKnown RBP9.71□□□□□ -0.86
SNX1-214ENST00000625244 PRCDQ00LT1 54 aa9.71□□□□□ -0.86
SNX1-214ENST00000625244 IFITM3Q01628 133 aa9.71□□□□□ -0.86
SNX1-214ENST00000625244 SMCO1Q147U7 214 aa9.71□□□□□ -0.86
SNX1-214ENST00000625244 IZUMO4Q1ZYL8 232 aa9.71□□□□□ -0.86
SNX1-214ENST00000625244 TOMM20LQ6UXN7 152 aa9.71□□□□□ -0.86
SNX1-214ENST00000625244 Q6ZSN1 163 aa9.71□□□□□ -0.86
SNX1-214ENST00000625244 LYZL2Q7Z4W2 148 aa9.71□□□□□ -0.86
SNX1-214ENST00000625244 LRTM2Q8N967 370 aa9.71□□□□□ -0.86
SNX1-214ENST00000625244 OR1S1Q8NH92 325 aa9.71□□□□□ -0.86
SNX1-214ENST00000625244 C1QTNF4Q9BXJ3 329 aa9.71□□□□□ -0.86
SNX1-214ENST00000625244 GPN1Q9HCN4 374 aaPredicted RBP9.71□□□□□ -0.86
SNX1-214ENST00000625244 NDUFA4L2Q9NRX3 87 aa9.71□□□□□ -0.86
SNX1-214ENST00000625244 A0A0B4J293 547 aa9.7□□□□□ -0.86
SNX1-214ENST00000625244 A0A0G2JRQ6 117 aa9.7□□□□□ -0.86
SNX1-214ENST00000625244 A0A1B0GU03 582 aa9.7□□□□□ -0.86
SNX1-214ENST00000625244 TEX48A0A1B0GUV7 120 aa9.7□□□□□ -0.86
SNX1-214ENST00000625244 P0C879 139 aa9.7□□□□□ -0.86
SNX1-214ENST00000625244 SNCAP37840 140 aa9.7□□□□□ -0.86
SNX1-214ENST00000625244 KRTAP10-1P60331 282 aa9.7□□□□□ -0.86
SNX1-214ENST00000625244 SPCS3P61009 180 aa9.7□□□□□ -0.86
SNX1-214ENST00000625244 NRARPQ7Z6K4 114 aa9.7□□□□□ -0.86
SNX1-214ENST00000625244 GPR146Q96CH1 333 aa9.7□□□□□ -0.86
SNX1-214ENST00000625244 GINS3Q9BRX5 216 aa9.7□□□□□ -0.86
SNX1-214ENST00000625244 PGPEP1Q9NXJ5 209 aa9.7□□□□□ -0.86
SNX1-214ENST00000625244 RFNGQ9Y644 331 aa9.7□□□□□ -0.86
SNX1-214ENST00000625244 LRP2P98164 4655 aa9.7□□□□□ -0.86
SNX1-214ENST00000625244 IGHV3OR16-12A0A075B7B8 117 aa9.69□□□□□ -0.86
SNX1-214ENST00000625244 SMIM9A6NGZ8 99 aa9.69□□□□□ -0.86
SNX1-214ENST00000625244 CEBPZOSA8MTT3 80 aa9.69□□□□□ -0.86
SNX1-214ENST00000625244 PRAF2O60831 178 aa9.69□□□□□ -0.86
SNX1-214ENST00000625244 HOXB5P09067 269 aa9.69□□□□□ -0.86
SNX1-214ENST00000625244 SUB1P53999 127 aaKnown RBP eCLIP9.69□□□□□ -0.86
SNX1-214ENST00000625244 NMSQ5H8A3 153 aa9.69□□□□□ -0.86
SNX1-214ENST00000625244 OR52E5Q8NH55 327 aa9.69□□□□□ -0.86
SNX1-214ENST00000625244 DCANP1Q8TF63 244 aa9.69□□□□□ -0.86
SNX1-214ENST00000625244 Q9H8V8 135 aa9.69□□□□□ -0.86
SNX1-214ENST00000625244 PLA2G2DQ9UNK4 145 aa9.69□□□□□ -0.86
SNX1-214ENST00000625244 RPS10-NUDT3A0A1W2PQS6 291 aa9.68□□□□□ -0.86
SNX1-214ENST00000625244 DBX1A6NMT0 343 aa9.68□□□□□ -0.86
SNX1-214ENST00000625244 NUDT3O95989 172 aa9.68□□□□□ -0.86
SNX1-214ENST00000625244 PTTG1O95997 202 aa9.68□□□□□ -0.86
SNX1-214ENST00000625244 IGHV3-48P01763 117 aa9.68□□□□□ -0.86
SNX1-214ENST00000625244 SLC25A6P12236 298 aa9.68□□□□□ -0.86
SNX1-214ENST00000625244 CCL18P55774 89 aa9.68□□□□□ -0.86
SNX1-214ENST00000625244 NUTF2P61970 127 aaKnown RBP9.68□□□□□ -0.86
SNX1-214ENST00000625244 SPINK9Q5DT21 86 aa9.68□□□□□ -0.86
SNX1-214ENST00000625244 PSMG4Q5JS54 123 aa9.68□□□□□ -0.86
SNX1-214ENST00000625244 GSG1LQ6UXU4 331 aa9.68□□□□□ -0.86
SNX1-214ENST00000625244 ZNF431Q8TF32 576 aaPredicted RBP9.68□□□□□ -0.86
SNX1-214ENST00000625244 MITD1Q8WV92 249 aa9.68□□□□□ -0.86
SNX1-214ENST00000625244 HEYLQ9NQ87 328 aaPredicted RBP9.68□□□□□ -0.86
SNX1-214ENST00000625244 INMT-MINDY4F8WBC2 141 aa9.67□□□□□ -0.86
SNX1-214ENST00000625244 I3L2K1 104 aa9.67□□□□□ -0.86
SNX1-214ENST00000625244 MED6O75586 246 aa9.67□□□□□ -0.86
SNX1-214ENST00000625244 IL5P05113 134 aa9.67□□□□□ -0.86
SNX1-214ENST00000625244 MFAP4P55083 255 aa9.67□□□□□ -0.86
SNX1-214ENST00000625244 DAD1P61803 113 aa9.67□□□□□ -0.86
SNX1-214ENST00000625244 HAMPP81172 84 aa9.67□□□□□ -0.86
SNX1-214ENST00000625244 ICAM4Q14773 271 aa9.67□□□□□ -0.86
SNX1-214ENST00000625244 GGNBP1Q5YKI7 109 aa9.67□□□□□ -0.86
SNX1-214ENST00000625244 OR1P1Q8NH06 330 aa9.67□□□□□ -0.86
SNX1-214ENST00000625244 SEC22CQ9BRL7 303 aa9.67□□□□□ -0.86
SNX1-214ENST00000625244 ZFAND3Q9H8U3 227 aa9.67□□□□□ -0.86
SNX1-214ENST00000625244 YTHDF2Q9Y5A9 579 aaKnown RBP9.67□□□□□ -0.86
SNX1-214ENST00000625244 H3BMM0 161 aa9.66□□□□□ -0.86
SNX1-214ENST00000625244 CORTO00230 105 aa9.66□□□□□ -0.86
SNX1-214ENST00000625244 WRBO00258 174 aa9.66□□□□□ -0.86
SNX1-214ENST00000625244 NXPH3O95157 252 aa9.66□□□□□ -0.86
SNX1-214ENST00000625244 AARDQ4LEZ3 155 aa9.66□□□□□ -0.86
SNX1-214ENST00000625244 SSX7Q7RTT5 188 aa9.66□□□□□ -0.86
SNX1-214ENST00000625244 NOXA1Q86UR1 476 aa9.66□□□□□ -0.86
SNX1-214ENST00000625244 C12orf45Q8N5I9 185 aaPredicted RBP9.66□□□□□ -0.86
SNX1-214ENST00000625244 TXN2Q99757 166 aa9.66□□□□□ -0.86
SNX1-214ENST00000625244 MARVELD1Q9BSK0 173 aa9.66□□□□□ -0.86
SNX1-214ENST00000625244 Q9H3A6 140 aa9.66□□□□□ -0.86
SNX1-214ENST00000625244 TMEM231Q9H6L2 316 aa9.66□□□□□ -0.86
SNX1-214ENST00000625244 PUS1Q9Y606 427 aaKnown RBP eCLIP9.66□□□□□ -0.86
SNX1-214ENST00000625244 FAM25EA8MYX2 175 aa9.65□□□□□ -0.86
SNX1-214ENST00000625244 FAM90A26D6RGX4 464 aa9.65□□□□□ -0.86
SNX1-214ENST00000625244 INS-IGF2F8WCM5 200 aa9.65□□□□□ -0.86
SNX1-214ENST00000625244 ADAP1O75689 374 aa9.65□□□□□ -0.86
SNX1-214ENST00000625244 HTR2BP41595 481 aa9.65□□□□□ -0.86
SNX1-214ENST00000625244 FXYD7P58549 80 aa9.65□□□□□ -0.86
SNX1-214ENST00000625244 RGS21Q2M5E4 152 aa9.65□□□□□ -0.86
SNX1-214ENST00000625244 TTC32Q5I0X7 151 aa9.65□□□□□ -0.86
SNX1-214ENST00000625244 ZNF114Q8NC26 417 aa9.65□□□□□ -0.86
SNX1-214ENST00000625244 MISP3Q96FF7 219 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms